Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073318-protein ID=TCONS_00073318-protein|Name=TCONS_00073318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0008270 zinc ion binding GO:0003676 nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0008270 zinc ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
20 40 60 80 100 120 140 160 180 200 220 240 Expect = 0.0036 / Score = 26.3 Expect = 3.2E-9 / Score = 36.2 Expect = 3.8E-5 / Score = 23.5 Score = 10.065 Score = Expect = 6.4E-22 / Score = 88.8 Expect = 5.1E-19 / Score = 67.8 Score = 17.114 Score = Expect = 2.3E-24 / Score = 85.4 Score = Expect = 1.90357E-37 / Score = 127.046 Sequence SM00343 G3DSA:4.10.60.10 PF00098 PS50158 SSF57756 SM00360 PF00076 PS50102 SSF54928 G3DSA:3.30.70.330 mobidb-lite cd12393
Blast
BLAST of TCONS_00073318-protein vs. Swiss-Prot (Human)
Match:
ZCRB1 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens GN=ZCRB1 PE=1 SV=2)
HSP 1 Score: 202.601 bits (514), Expect = 1.289e-65
Identity = 128/246 (52.03%), Postives = 162/246 (65.85%), Query Frame = 0
Query: 1 MSGGLAPSKSTVYVGNLPFSLTNNDLHKVFEKFGRIAKVTILRDKVTRTSKGVAFVQFIERDSAITCCKSVNEKTLFERKIKCVIAKDNGRASEFIRKKDYPDKSSCYECGETGHLSYACPKNLLGSREPPPKKEKKTKKEKAEEKEHSKNLIKSYYDADEANDGVNEEEQGEDPYESSLSYAIALDSS----QQKRHFSSIVVQPSTSRTSTDYDGYKDNNDREEESYVKRKKYKPSSYFSDEEE 242
MSGGLAPSKSTVYV NLPFSLTNNDL+++F K+G++ KVTI++DK TR SKGVAF+ F+++DSA C +++N K LF R IK IA DNGRA+EFIR+++Y DKS CYECGE+GHLSYACPKN+LG REPP KKEKK KK+ E +E + E++GEDP SLS AIA + +QK+ +PS+ ST D +R + K S+YFSDEEE
Sbjct: 1 MSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYACPKNMLGEREPPKKKEKKKKKKAPEPEEEIEE-------------VEESEDEGEDPALDSLSQAIAFQQAKIEEEQKKW------KPSSGVPSTSDDS-------------RRPRIKKSTYFSDEEE 214
The following BLAST results are available for this feature:
BLAST of TCONS_00073318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S G G L A P S K S T V Y V G N L P F S L T N N D L H K V F E K F G R I A K V T I L R D K V T R T S K G V A F V Q F I E R D S A I T C C K S V N E K T L F E R K I K C V I A K D N G R A S E F I R K K D Y P D K S S C Y E C G E T G H L S Y A C P K N L L G S R E P P P K K E K K T K K E K A E E K E H S K N L I K S Y Y D A D E A N D G V N E E E Q G E D P Y E S S L S Y A I A L D S S Q Q K R H F S S I V V Q P S T S R T S T D Y D G Y K D N N D R E E E S Y V K R K K Y K P S S Y F S D E E E E D E S 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.29e-65 / Id = 52.03 Sequence ZCRB1
Match Name E-value Identity Description
ZCRB1 1.289e-65 52.03 Zinc finger CCHC-type and RNA-binding motif-contai... [more]
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