TCONS_00073309-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073309-protein
Unique Name	TCONS_00073309-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	313

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073309-protein ID=TCONS_00073309-protein|Name=TCONS_00073309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MKPLFLDGEQVEQHLPLLDLLDGIEKSFVNYSNKIEGLIHPQRLVLNVQN
NDLFFVKPVVSTPDKTICTKLLTLFPENEAKYQVPSHQAIVTVFDSDTGS
LQAVMDGVAVTDLRTAAASAIARKHLAPRGDSNILAIVGTGHQAVSHVKL
FRAVSGYKEIRVCSRSNPQRAQQFAKQWGIKAASSVQEGVRDADIVVTVT
KSSAQPVVLYEWLKPNALVVIVGSPISSQRDVDSSTMLNSIVVADSKPGA
METSGDVIQSGCEVHGELGEVIGGKMKVGFDKMRVFKSSGLAVQDLVAGK
IVVQNYRKAIGEC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045478	XLOC_045478	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073309	TCONS_00073309	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003462	ODC_Mu_crystall
IPR023401	ODC_N
IPR016040	NAD(P)-bd_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003462	Ornithine cyclodeaminase/mu-crystallin	PIRSF	PIRSF001439	CryM	coord: 1..311 e-value: 4.3E-64 score: 214.5
IPR003462	Ornithine cyclodeaminase/mu-crystallin	PFAM	PF02423	OCD_Mu_crystall	coord: 4..307 e-value: 2.8E-59 score: 200.5
None	No IPR available	GENE3D	3.40.50.720		coord: 142..290 e-value: 4.3E-24 score: 84.9
IPR023401	Ornithine cyclodeaminase, N-terminal	GENE3D	3.30.1780.10		coord: 1..141 e-value: 1.6E-32 score: 112.0
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..308

Blast

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BLAST of TCONS_00073309-protein vs. Swiss-Prot (Human)
Match: CRYM (Ketimine reductase mu-crystallin OS=Homo sapiens GN=CRYM PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.902e-64
Identity = 121/309 (39.16%), Postives = 183/309 (59.22%), Query Frame = 0

Query:    3 PLFLDGEQVEQHLPLLDLL-DGIEKSFVNYSNKIEG-LIHPQRLVLNVQNNDLFF-VKPVVSTPDKTICTKLLTLFPENEAKYQVPSHQAIVTVFDSDTGSLQAVMDGVAVTDLRTAAASAIARKHLAPRGDSNILAIVGTGHQAVSHVKLFRAVSGYKEIRVCSRSNPQRAQQFAK--QWGIKAASSVQEGVRDADIVVTVTKSSAQPVVLYEWLKPNALVVIVGSPISSQRDVDSSTMLNSIVVADSKPGAMETSGDVIQSGCEVHGELGEVIGGKMKVGFDKMRVFKSSGLAVQDLVAGKIVVQNY 306
            P FL   +VE+HL    LL   +E +  N+S+  EG ++ P R V+ V  +  +  V P  S  +  + TKL+T + +      VPSHQA V +F+   G+L AVMDG  +T  RTAA SAIA K L P   S +L I+G G QA SH ++F     +KE+R+ +R+  + A++FA   Q  ++  SSVQE V  AD+++TVT ++ +P++  EW+KP A +  VG+     R++D   M  +++  DS+  A++ SGDV+ SG E+  ELGEVI G      +K  VFKS G+AV+D VA K++  ++
Sbjct:    5 PAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPP-SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTK-ENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT-EPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTVAAKLIYDSW 310

The following BLAST results are available for this feature:

BLAST of TCONS_00073309-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073309-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
CRYM	6.902e-64	39.16	Ketimine reductase mu-crystallin OS=Homo sapiens G...	[more]

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TCONS_00073309-protein (polypeptide) - C. hemisphaerica

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