TCONS_00071586-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071586-protein
Unique NameTCONS_00071586-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071586-protein ID=TCONS_00071586-protein|Name=TCONS_00071586-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MVVDSLVVRLYFLLTCVFIGRIVSLPVLQPMSYLERYGYHQKPSVKNLLF
EYSSSTIPEEEETIKSSIKNFQRFVGLPQTGEFDDATLHQMKAPRCGRPD
FQSQTLLFLLPQRYYWKKWDLTYQVEKYTTDLAKRDIDQIFQDSFEQWSK
ASDLTFQNSNNSVVDIMMKFASGDHGDNFPFDGIGRVLAHAFPPPNGDIH
FDDHENFIASGSQGGINLPWVALHEIGHSLGLQHSNVKSSVMYPFYPGHS
LASTVNLDQDDITNIQQLYGKRPVSTTSTTTKANVIQDCLDKYPDYLCGS
WARGGFCTRSQRVAKYCPKTCKQYQYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044479XLOC_044479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071586TCONS_00071586Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR003582ShKT_dom
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR002477Peptidoglycan-bd-like
IPR001818Pept_M10_metallopeptidase
IPR033739M10A_MMP
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 164..192
score: 57.91
coord: 221..246
score: 60.46
coord: 91..104
score: 50.0
coord: 141..156
score: 34.07
coord: 257..270
score: 60.37
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 288..325
e-value: 2.7E-4
score: 30.3
IPR003582ShKT domainPFAMPF01549ShKcoord: 289..322
e-value: 5.0E-5
score: 23.7
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 289..327
score: 9.436
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 112..271
e-value: 9.7E-38
score: 141.4
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 26..278
e-value: 9.2E-68
score: 227.8
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 33..91
e-value: 3.5E-6
score: 27.0
IPR002477Peptidoglycan binding-likeSUPERFAMILY47090PGBD-likecoord: 30..101
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 116..270
e-value: 3.4E-51
score: 173.1
IPR033739Peptidase M10A, catalytic domainCDDcd04278ZnMc_MMPcoord: 116..270
e-value: 2.16294E-73
score: 225.161
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 109..272

Blast
[Close]
BLAST of TCONS_00071586-protein vs. Swiss-Prot (Human)
Match: MMP7 (Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.260e-52
Identity = 98/268 (36.57%), Postives = 138/268 (51.49%), Query Frame = 0 
Query:    8 VRLYFLLTCVFIGRIVSLPVLQPMSYLERYGYHQKPSVKNLLFEYSSSTIPEEEETIKSSIKNFQRFVGLPQTGEFDDATLHQMKAPRCGRPDFQSQTLLFLLPQRYYWKKWDLTYQVEKYTTDLAKRDIDQIFQDSFEQWSKASDLTFQNSNNSVVDIMMKFASGDHGDNFPFDGIGRVLAHAFPPP---NGDIHFDDHENFIASGSQGGINLPWVALHEIGHSLGLQHSNVKSSVMYPFYPGHSLASTVNLDQDDITNIQQLYGKR 272
            +RL  L     +   ++LP+ Q    +    + Q        + Y S T  +   ++++ +K  Q+F GLP TG  +   +  M+ PRCG PD    +L    P    W    +TY++  YT DL    +D++   +   W K   L F+       DIM+ FA G HGD++PFDG G  LAHAF P     GD HFD+ E +   GS  GIN  + A HE+GHSLG+ HS+  ++VMYP Y G+       L QDDI  IQ+LYGKR
Sbjct:    1 MRLTVLCAVCLLPGSLALPLPQEAGGMSELQWEQAQDYLKRFYLYDSET--KNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEYSLF---PNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-TDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTY-GNGDPQNFKLSQDDIKGIQKLYGKR 261
The following BLAST results are available for this feature:
BLAST of TCONS_00071586-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP74.260e-5236.57Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1[more]
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