Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00071347-protein ID=TCONS_00071347-protein|Name=TCONS_00071347-protein|organism=Clytia hemisphaerica|type=polypeptide|length=350bp MAADNLSCVLYGIDDMRIESRPTPEPGPNQVLLSMHSVGICGSDVHYWKH GRIGDFVVNAPMVLGHEASGIVVETGEGVEHLKKGDRVAIEPGVPCRMCD CCKTGSYNLCPKMEFCATPPIDGSLCRYYVHAADFCYKLPDHVSCEEGAL LEPLSVAVNACKRAQVKMGDHILVCGAGPIGLVSLLVAKACGATQVCITD LDENRLKVAKELGADMTFKITSRDGREVAEQVKKKFGRIDKTIECSGAES SVHTAIYATASGGIAMLVGMGKAEINFPIFEALAREIDVRGNFRYVNCYP TALDLVASGKVNVKPLITHRFKLEESHKAFTTSSSPGCNTIKVMISCHEE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0016491 oxidoreductase activity
GO:0008270 zinc ion binding
Vocabulary: Biological Process
Term Definition
GO:0055114 oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0055114
oxidation-reduction process
molecular_function
GO:0016491
oxidoreductase activity
molecular_function
GO:0008270
zinc ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 Expect = 3.8E-5 / Score = -102.5 Expect = 1.8E-26 / Score = 92.2 Expect = 4.6E-51 / Score = 172.3 Expect = 0.0 / Score = 582.145 Expect = 6.0E-21 / Score = 74.6 Expect = 2.7E-31 / Score = 107.6 Score = Score = Score = Sequence SM00829 G3DSA:3.40.50.720 G3DSA:3.90.180.10 cd05285 PF00107 PF08240 PS00059 SSF51735 SSF50129
IPR Term IPR Description Source Source Term Source Description Alignment
IPR020843 Polyketide synthase, enoylreductase domain SMART SM00829 PKS_ER_names_mod coord: 12..345 e-value: 3.8E-5 score: -102.5
None No IPR available GENE3D 3.40.50.720 coord: 171..292 e-value: 1.8E-26 score: 92.2
None No IPR available GENE3D 3.90.180.10 coord: 6..170 e-value: 4.6E-51 score: 172.3
None No IPR available CDD cd05285 sorbitol_DH coord: 7..347 e-value: 0.0 score: 582.145
IPR013149 Alcohol dehydrogenase, C-terminal PFAM PF00107 ADH_zinc_N coord: 179..307 e-value: 6.0E-21 score: 74.6
IPR013154 Alcohol dehydrogenase, N-terminal PFAM PF08240 ADH_N coord: 28..139 e-value: 2.7E-31 score: 107.6
IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PROSITE PS00059 ADH_ZINC coord: 65..79
IPR016040 NAD(P)-binding domain SUPERFAMILY 51735 NAD(P)-binding Rossmann-fold domains coord: 143..311
IPR011032 GroES-like SUPERFAMILY 50129 GroES-like coord: 6..177
Blast
BLAST of TCONS_00071347-protein vs. Swiss-Prot (Human)
Match:
DHSO (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4)
HSP 1 Score: 410.609 bits (1054), Expect = 1.123e-143
Identity = 196/345 (56.81%), Postives = 255/345 (73.91%), Query Frame = 0
Query: 4 DNLSCVLYGIDDMRIESRPTPEPGPNQVLLSMHSVGICGSDVHYWKHGRIGDFVVNAPMVLGHEASGIVVETGEGVEHLKKGDRVAIEPGVPCRMCDCCKTGSYNLCPKMEFCATPPIDGSLCRYYVHAADFCYKLPDHVSCEEGALLEPLSVAVNACKRAQVKMGDHILVCGAGPIGLVSLLVAKACGATQVCITDLDENRLKVAKELGADMTFKITSRDGREVAEQVKKKFG-RIDKTIECSGAESSVHTAIYATASGGIAMLVGMGKAEINFPIFEALAREIDVRGNFRYVNCYPTALDLVASGKVNVKPLITHRFKLEESHKAFTTSSSPGCNTIKVMISC 347
+NLS V++G D+R+E+ P PEPGPN+VLL MHSVGICGSDVHYW++GRIG+F+V PMVLGHEASG V + G V+HLK GDRVAIEPG P + CK G YNL P + FCATPP DG+LCR+Y H A FCYKLPD+V+ EEGAL+EPLSV ++AC+R V +G +LVCGAGPIG+V+LLVAKA GA QV +TDL RL AKE+GAD+ +I+ +E+A +V+ + G + + TIEC+GAE+S+ IYAT SGG +LVG+G P+ A RE+D++G FRY N +P A+ ++AS VNVKPL+THRF LE++ +AF T G +K+M+ C
Sbjct: 8 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKK-GLG-LKIMLKC 350
The following BLAST results are available for this feature:
BLAST of TCONS_00071347-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M A A D N L S C V L Y G I D D M R I E S R P T P E P G P N Q V L L S M H S V G I C G S D V H Y W K H G R I G D F V V N A P M V L G H E A S G I V V E T G E G V E H L K K G D R V A I E P G V P C R M C D C C K T G S Y N L C P K M E F C A T P P I D G S L C R Y Y V H A A D F C Y K L P D H V S C E E G A L L E P L S V A V N A C K R A Q V K M G D H I L V C G A G P I G L V S L L V A K A C G A T Q V C I T D L D E N R L K V A K E L G A D M T F K I T S R D G R E V A E Q V K K K F G R I D K T I E C S G A E S S V H T A I Y A T A S G G I A M L V G M G K A E I N F P I F E A L A R E I D V R G N F R Y V N C Y P T A L D L V A S G K V N V K P L I T H R F K L E E S H K A F T T S S S P G C N T I K V M I S C H E E 50 100 150 200 250 300 350 Expect = 1.12e-143 / Id = 56.81 Sequence DHSO
Match Name E-value Identity Description
DHSO 1.123e-143 56.81 Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
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