TCONS_00071347-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071347-protein
Unique NameTCONS_00071347-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length350

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071347-protein ID=TCONS_00071347-protein|Name=TCONS_00071347-protein|organism=Clytia hemisphaerica|type=polypeptide|length=350bp
MAADNLSCVLYGIDDMRIESRPTPEPGPNQVLLSMHSVGICGSDVHYWKH
GRIGDFVVNAPMVLGHEASGIVVETGEGVEHLKKGDRVAIEPGVPCRMCD
CCKTGSYNLCPKMEFCATPPIDGSLCRYYVHAADFCYKLPDHVSCEEGAL
LEPLSVAVNACKRAQVKMGDHILVCGAGPIGLVSLLVAKACGATQVCITD
LDENRLKVAKELGADMTFKITSRDGREVAEQVKKKFGRIDKTIECSGAES
SVHTAIYATASGGIAMLVGMGKAEINFPIFEALAREIDVRGNFRYVNCYP
TALDLVASGKVNVKPLITHRFKLEESHKAFTTSSSPGCNTIKVMISCHEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044338XLOC_044338Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071347TCONS_00071347Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013149ADH_C
IPR013154ADH_N
IPR002328ADH_Zn_CS
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 12..345
e-value: 3.8E-5
score: -102.5
NoneNo IPR availableGENE3D3.40.50.720coord: 171..292
e-value: 1.8E-26
score: 92.2
NoneNo IPR availableGENE3D3.90.180.10coord: 6..170
e-value: 4.6E-51
score: 172.3
NoneNo IPR availableCDDcd05285sorbitol_DHcoord: 7..347
e-value: 0.0
score: 582.145
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 179..307
e-value: 6.0E-21
score: 74.6
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 28..139
e-value: 2.7E-31
score: 107.6
IPR002328Alcohol dehydrogenase, zinc-type, conserved sitePROSITEPS00059ADH_ZINCcoord: 65..79
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 143..311
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 6..177

Blast
[Close]
BLAST of TCONS_00071347-protein vs. Swiss-Prot (Human)
Match: DHSO (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4)

HSP 1 Score: 410.609 bits (1054), Expect = 1.123e-143
Identity = 196/345 (56.81%), Postives = 255/345 (73.91%), Query Frame = 0 
Query:    4 DNLSCVLYGIDDMRIESRPTPEPGPNQVLLSMHSVGICGSDVHYWKHGRIGDFVVNAPMVLGHEASGIVVETGEGVEHLKKGDRVAIEPGVPCRMCDCCKTGSYNLCPKMEFCATPPIDGSLCRYYVHAADFCYKLPDHVSCEEGALLEPLSVAVNACKRAQVKMGDHILVCGAGPIGLVSLLVAKACGATQVCITDLDENRLKVAKELGADMTFKITSRDGREVAEQVKKKFG-RIDKTIECSGAESSVHTAIYATASGGIAMLVGMGKAEINFPIFEALAREIDVRGNFRYVNCYPTALDLVASGKVNVKPLITHRFKLEESHKAFTTSSSPGCNTIKVMISC 347
            +NLS V++G  D+R+E+ P PEPGPN+VLL MHSVGICGSDVHYW++GRIG+F+V  PMVLGHEASG V + G  V+HLK GDRVAIEPG P    + CK G YNL P + FCATPP DG+LCR+Y H A FCYKLPD+V+ EEGAL+EPLSV ++AC+R  V +G  +LVCGAGPIG+V+LLVAKA GA QV +TDL   RL  AKE+GAD+  +I+    +E+A +V+ + G + + TIEC+GAE+S+   IYAT SGG  +LVG+G      P+  A  RE+D++G FRY N +P A+ ++AS  VNVKPL+THRF LE++ +AF T    G   +K+M+ C
Sbjct:    8 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKK-GLG-LKIMLKC 350
The following BLAST results are available for this feature:
BLAST of TCONS_00071347-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHSO1.123e-14356.81Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
back to top