TCONS_00071167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071167-protein
Unique NameTCONS_00071167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071167-protein ID=TCONS_00071167-protein|Name=TCONS_00071167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
EKYSSRIRSKMKQPNYPVGYTTKKRPYGLMEKELEEYRKYFWQQDVDGDG
QLSKNEFNNMLRTMGLNLTRQEVENLFAKTDVDKNYRISFHEFAEAFIAK
KREHVSGDRLRRVFQEADRDRDGYLTTDECLAALKQLGHVMDDKGIRRVM
GLMDKNNDGMITFQEFCKFMA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044235XLOC_044235Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071167TCONS_00071167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 72..100
e-value: 0.11
score: 21.6
coord: 145..171
e-value: 0.25
score: 20.4
coord: 109..137
e-value: 1.3E-4
score: 31.3
coord: 36..64
e-value: 0.54
score: 19.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 38..97
e-value: 2.4E-12
score: 47.1
coord: 109..170
e-value: 8.1E-16
score: 58.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 68..103
score: 10.218
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 141..171
score: 13.286
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 32..67
score: 12.477
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 105..140
score: 13.007
IPR002048EF-hand domainCDDcd00051EFhcoord: 45..97
e-value: 7.57582E-11
score: 53.3205
IPR002048EF-hand domainCDDcd00051EFhcoord: 109..171
e-value: 5.4187E-13
score: 59.4837
NoneNo IPR availableGENE3D1.10.238.10coord: 7..51
e-value: 2.7E-5
score: 23.4
coord: 85..123
e-value: 4.1E-15
score: 54.9
NoneNo IPR availableGENE3D1.10.238.10coord: 124..171
e-value: 8.0E-19
score: 66.9
coord: 52..84
e-value: 5.1E-17
score: 61.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 45..57
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 154..166
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 27..170

Blast
[Close]
BLAST of TCONS_00071167-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.272e-19
Identity = 40/143 (27.97%), Postives = 77/143 (53.85%), Query Frame = 0 
Query:   29 LMEKELEEYRKYFWQQDVDGDGQLSKNEFNNMLRTMGLNLTRQEVENLFAKTDVDKNYRISFHEFAEAFIAKKREHVSGDRLRRVFQEADRDRDGYLTTDECLAALKQLGHVMDDKGIRRVMGLMDKNNDGMITFQEFCKFMA 171
            L E+++ E+++ F   D DGDG ++  E   ++R++G N T  E++++  + D D N  I F EF      K ++  S + +R  F+  D+D +GY++  E    +  LG  + D+ +  ++   D + DG + ++EF + M 
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00071167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM32.272e-1927.97Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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