TCONS_00070725-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070725-protein
Unique NameTCONS_00070725-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length456

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070725-protein ID=TCONS_00070725-protein|Name=TCONS_00070725-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MNIKIENYQYEKNAESAVSLLFDVQMEDGVIGTCNIWIQDIFHQLKFADG
VGNKFLFRPKHTGEIHNDDVEKSIKNIEKNVHEEKFRIRIGEENTIKVKE
EISTDVEIQYYDKLRYDVENNIKNIERNVHEQKFKIRIGEESAIKIKEEI
SADVEIQIDTKTYEASPKSLEQCNDFNRLKDLQTGNESSKQLHKNSIQEE
VDKLIEYQECGESFTSTKLTLHKGKHKLKEYKCKKCGERFTQRGDLKSHQ
NKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFAN
NAYLSRHRKVHEGNKYKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKC
SKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLHKG
VTSFRCGECGEQFDRRHFLMLHSKEKHDHPGPFTCCECGKSFNKRTTLAK
HFSEQH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044001XLOC_044001Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070725TCONS_00070725Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 348..370
e-value: 0.004
score: 26.4
coord: 433..456
e-value: 0.04
score: 23.1
coord: 316..339
e-value: 0.001
score: 28.3
coord: 376..398
e-value: 8.7E-4
score: 28.6
coord: 289..311
e-value: 6.5E-4
score: 29.0
coord: 404..427
e-value: 0.21
score: 20.7
coord: 231..254
e-value: 3.2E-4
score: 30.0
coord: 205..226
e-value: 83.0
score: 5.2
coord: 261..283
e-value: 0.15
score: 21.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 291..311
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 263..283
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 233..254
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 435..456
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 350..370
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 406..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 318..339
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 378..398
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 289..316
score: 15.23
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 404..432
score: 11.531
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 261..288
score: 12.778
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 316..344
score: 12.819
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 231..259
score: 11.843
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 348..375
score: 13.006
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 376..403
score: 13.38
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 433..456
score: 12.258
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 357..413
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 398..451
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 297..352
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 259..311
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 203..255
NoneNo IPR availableGENE3D3.30.160.60coord: 375..389
e-value: 3.3E-12
score: 45.9
NoneNo IPR availableGENE3D2.60.260.40coord: 327..357
e-value: 3.8E-8
score: 32.9
NoneNo IPR availableGENE3D2.20.28.10coord: 242..265
e-value: 2.2E-4
score: 20.5
coord: 358..374
e-value: 7.7E-8
score: 31.6
NoneNo IPR availableGENE3D3.30.160.60coord: 266..279
e-value: 2.6E-5
score: 23.7
NoneNo IPR availableGENE3D3.30.160.60coord: 280..301
e-value: 1.3E-16
score: 59.8
NoneNo IPR availableGENE3D3.30.160.60coord: 417..456
e-value: 1.3E-8
score: 34.6
coord: 302..326
e-value: 8.6E-16
score: 57.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 376..398
e-value: 0.0099
score: 16.2
coord: 433..456
e-value: 0.0072
score: 16.6
coord: 348..370
e-value: 0.014
score: 15.7
coord: 316..339
e-value: 3.7E-5
score: 23.9
coord: 231..254
e-value: 3.6E-5
score: 23.9
coord: 289..311
e-value: 3.3E-5
score: 24.0
NoneNo IPR availableGENE3D3.30.160.60coord: 390..416
e-value: 2.8E-14
score: 52.7
NoneNo IPR availableGENE3D2.20.28.10coord: 199..241
e-value: 1.7E-8
score: 34.1

Blast
BLAST of TCONS_00070725-protein vs. Swiss-Prot (Human)
Match: ZN540 (Zinc finger protein 540 OS=Homo sapiens GN=ZNF540 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.422e-50
Identity = 115/326 (35.28%), Postives = 168/326 (51.53%), Query Frame = 0
Query:  156 IQIDTKTYEAS--PKSLEQCNDFNRLKDLQTGNESSKQLHKNSIQEEVDKLIEYQECGESF-TSTKLTLHKGKHKLKE-YKCKKCGERFTQRGDLKSHQNKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKC-------------------------FKCSKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLHKGVTSFRCGECGEQFDRRHFLMLHSKEKHDHPGPFTCCECGKSFNKRTTLAKH 451
            I    K YE     K+   C    R + + TG                 K  E +ECG++F  S  LT H+  H  K+ Y+CK+CG+ F  RG L  H  K     IK F C+ C+K F       VH  IHTG KP+ECKECGK+F   + L+ H+++H G K Y+C++CGK++   + +  HKK IH D+K +KC                         +KC +C K++ R+G    H++ HS +KP++CKECGKSF+ +     H+K+H GV  ++C ECG+ F R   L +H +  H    P+ C +CGK+F   + L +H
Sbjct:  320 IHTGKKPYECKECGKAFSVCGQLTRHQKIHTGV----------------KPYECKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRH--KTIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLHKK-IHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQR-IHTGEKPYECKQCGKAFRLNSHLTEH 625          

HSP 2 Score: 153.295 bits (386), Expect = 2.179e-40
Identity = 107/301 (35.55%), Postives = 148/301 (49.17%), Query Frame = 0
Query:  208 QECGESFT-STKLTLHKGKHKL-KEYKCKKCGERFTQRGDLKSHQNKKHQKKI--------------------------KKFKCQTCKKKFP----------------------CKYSFNV------HVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKCSKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLHKGVTSFRCGECGEQFDRRHFLMLHSKEKHDHPGPFTCCECGKSFNKRTTLAKH 451
            ++CG+ F+ S +LTLH+  H   K Y+C++CG+ FT    L  HQ     KK                           K ++C+ C K F                       C  +F+V      H  IHTG+KP+ECKECGK+F  + YL+ HR+ H G K Y+C++CGKS+     L  H KTIH  IK    F C  C+K++   G    H R H+  KP+ECKECGK+F  +  L  H++LH GV  + C ECG+ F  R  + LH K+ H    P+ C  CGK+F     L +H
Sbjct:  218 EKCGKVFSHSYQLTLHQRFHTGEKPYECQECGKTFTLYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKRIHTGKKSYECKECGKVFQLIFYFKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRH-KTIHTGIKP---FACKVCEKAFSYSGDLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLH-KKIHTDVKPYKCVRCGKTFRFGFYLTEH 513          

HSP 3 Score: 146.747 bits (369), Expect = 3.363e-38
Identity = 90/220 (40.91%), Postives = 119/220 (54.09%), Query Frame = 0
Query:  233 CKKCGERFTQRGDLKSHQNKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKCSKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLHKGVTSFRCGECGEQFDRRHFLMLHSKEKHDHPGPFTCCECGKSFNKRTTLAKH 451
            CK+CG  F     L  HQ  K     K  KC+ C K F   Y   +H   HTG KP+EC+ECGK+F     L+RH+K+H G K Y C+ C K + +   L  HK+ IH   K ++C +C K  +  F    F  H R H+  KP+ECKECGK+F+    L  H+K+H GV  + C ECG+ F R  F +   +  H    P+ C ECGKSFN R  L +H
Sbjct:  189 CKECGSTFNNVYQLTLHQ--KIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKPYECQECGKTFTLYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKR-IHTGKKSYECKECGKVFQLIFY---FKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKECGKTF-RLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRH 401          

HSP 4 Score: 137.887 bits (346), Expect = 4.095e-35
Identity = 85/226 (37.61%), Postives = 123/226 (54.42%), Query Frame = 0
Query:  202 DKLIEYQECGESFT-STKLTLHKGKHK-LKEYKCKKCGERFTQRGDLKSHQNKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKCSKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLHKGVTSFRCGECGEQFDRRHFLMLHSK 424
            +K  E +ECG++F   + LT H+  H  +K Y+CK+CG+ F  R  +  H  KK    +K +KC  C K F   +    H  IHTG KP++CKECGK+F     L  H K+H G K Y C++CGKS++       H+K IH  +K +KC    +C K++ R      H R H+  KP+ECK+CGK+F     L  H+++H G   + C  C + F +   L  H K
Sbjct:  436 EKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLH--KKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQK-IHTGVKPYKC---KECGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSHLYQHQK 655          

HSP 5 Score: 121.709 bits (304), Expect = 1.166e-29
Identity = 85/251 (33.86%), Postives = 134/251 (53.39%), Query Frame = 0
Query:  151 SADVEIQIDTKTYEASPKSLEQCNDFNRLKDLQTGNESSKQLHKNSIQEEVDKLIEYQECGESF-TSTKLTLHKGKHK-LKEYKCKKCGERFTQRGDLKSHQNKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKCSKCDKSYFRKGRFDAHMRAHSNIKPFECKECGKSFAWKRSLISHEKLH 398
            S D+ +     T E  P   ++C     L+ + T ++   +LH         K  E +ECG++F   ++++LHK  H  +K YKC +CG+ F     L  HQ  +     K +KC+ C K F  + +   H+ IH+GLKP++CKECGKSF+     + H+K+H G K YKC++CGK+++    L+ H++ IH   K ++C    +C K++        H R H+  KP+ECK C K+F     L  H+K H
Sbjct:  423 SGDLRVHSRIHTGE-KPYECKECGKAFMLRSVLTEHQ---RLHTGV------KPYECKECGKTFRVRSQISLHKKIHTDVKPYKCVRCGKTFRFGFYLTEHQ--RIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQR-IHTGEKPYEC---KQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSHLYQHQKTH 657          

HSP 6 Score: 98.2117 bits (243), Expect = 7.157e-22
Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 0
Query:  210 CGESFT-STKLTLHKGKHKL-KEYKCKKCGERFTQRGDLKSHQNKKHQKKIKKFKCQTCKKKFPCKYSFNVHVSIHTGLKPFECKECGKSFANNAYLSRHRKVHEGNK-YKCEDCGKSYTTIAHLKTHKKTIHEDIKRFKCFKCSKCDKSYFRKGRFDAHMRAHSNI 373
            CG++F     LT H+  H   K YKCK+CG+ F +RG+LK H   K    +K + C+ C K F  +  F  H  IHTG+KP++CKECGK+F+ +  L  H+++H G K Y+C+ CGK++   +HL  H++ IH   K ++C     C K++ +      H + H+ I
Sbjct:  500 CGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHL--KIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQR-IHTGEKPYEC---KVCRKAFRQYSHLYQHQKTHNVI 660          
The following BLAST results are available for this feature:
BLAST of TCONS_00070725-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5401.422e-5035.28Zinc finger protein 540 OS=Homo sapiens GN=ZNF540 ... [more]
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