TCONS_00070517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070517-protein
Unique NameTCONS_00070517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length950

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070517-protein ID=TCONS_00070517-protein|Name=TCONS_00070517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=950bp
MTTGGGPQLNSTSHTEFEHYHQQQQQRLGGGRSMSRDQNMTSTMTSSSTH
RSDGVRQQRDGYDYEGTSFRGSELDYDASGSHLDYSGHEDYDRRNNIHNN
QMSNTTTTTTTTKNDHYINESSNNYNSNTSSARGRTRQRDVRHNNSRQPS
VSSYNSRDRIADEDFAEISINRTDTSNDRMDAVHGAGNVSGFYHDSSATS
RKEQKNTSSSSGASSGSGLRMASQQQMTTSSQHQQQSSSSSSRQQREQYQ
QNSSSAHSTLDIKLKGKKSSNDIDISLLDLLMYLKTSDRVLKANTAGYIM
HLTFNDDEAKQKIREFDIIPLLVKLLDHEDEDCQRNAAGALRNLSYGKFV
NDNKIAIYECGGIEACVRLLYRTSWIEVRQHVTGILCNLSSYESLKLHVL
REAMEAVALLIIVPLSGWEKDHAMMGRRPGIISWSLLLRNATGILRNVSS
AGHEARTTIRFRIEGLVDACLWILRAAVGSEATEDINNKIIENIMCTLRN
ISYKIDVEIDRNVYTDAVRVPVKHSNANSPQMSPSRDHRSTNQDGDSDSV
DNGNHDNNKKNKKNRLIPRDASKTGCLGMKKKPFKKRMENRGTLPLQPSK
KPPPEQWAYHPPHANDKKYTPMGVELLWQPNTVTIYIYVITNSTNPLTLE
SAAAAVHNLTGGKWNWAALLRVHVRLNRGLPPLHDLLSVDQEYVVRSVAY
ALRNLAIDHTNKWSIGWFAPEGLVQVLPSVKAYETDTKPSEYTICAILSV
LQALVYKDYNNSKKVKEADGIRKLVALTREEPREQKNDQLRSYSNKVIID
ANRVLLYMWEFKDCRESIKKLLWSHSKAEDGEKVFKQNTLKNPHKGDQFA
DVDQAEEREPIAERDERRYVSFEQPNDDRELSFNDRPPEYEMREFGHQDV
PSDEADENDTLIRRSLEQKKKKTPSAGASKGRNRYDGEENEESRLMTSDR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043897XLOC_043897Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070517TCONS_00070517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 453..503
e-value: 190.0
score: 3.4
coord: 757..810
e-value: 220.0
score: 2.8
coord: 306..346
e-value: 3.1E-9
score: 46.7
coord: 350..391
e-value: 0.21
score: 20.6
coord: 667..707
e-value: 16.0
score: 11.7
IPR000225ArmadilloPFAMPF00514Armcoord: 306..345
e-value: 7.3E-10
score: 38.4
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 678..712
score: 8.662
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 317..345
score: 11.602
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 361..404
score: 9.362
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 613..901
e-value: 2.0E-15
score: 56.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 268..507
e-value: 6.1E-39
score: 133.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 524..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 837..950
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..261
NoneNo IPR availableCDDcd00020ARMcoord: 625..751
e-value: 6.07308E-8
score: 50.7759
NoneNo IPR availableCDDcd00020ARMcoord: 280..391
e-value: 1.7194E-24
score: 99.3111
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 280..532
coord: 621..813

Blast
[Close]
BLAST of TCONS_00070517-protein vs. Swiss-Prot (Human)
Match: CTND2 (Catenin delta-2 OS=Homo sapiens GN=CTNND2 PE=1 SV=3)

HSP 1 Score: 326.25 bits (835), Expect = 3.691e-95
Identity = 205/555 (36.94%), Postives = 307/555 (55.32%), Query Frame = 0 
Query:  274 DISLLDLLMYLKTSDRVLKANTAGYIMHLTFNDDEAKQKIREFDIIPLLVKLLDHEDEDCQRNAAGALRNLSYGKFVNDNKIAIYECGGIEACVRLLYRTSWIEVRQHVTGILCNLSSYESLKLHVLREAMEAVALLIIVPLSGWEKDHAMMGRRPGIISWSLLLRNATGILRNVSSAGHEARTTIRFRIEGLVDACLWILRAAVGSEATEDINNKIIENIMCTLRNISYKIDVEIDRNVYTDAVRVPVKHSNANSPQMSPSRDHRSTNQ-DGDSDSVDNGNHDNNKKNKKNRLIPRDASKTGCLGMKKKPFKKRMENRGTLPLQPSKKPPPEQWAYHPPHANDKKYTPMGVELLWQPNTVTIYIYVITNSTNPLTLESAAAAVHNLTGGKWNWAALLRVHVRLNRGLPPLHDLLSVDQEYVVRSVAYALRNLAIDHTNKWSIGWFAPEGLVQVLPSV-KAYETDTKP-SEYTICAILSVLQALVYKDYNNSKKVKEADGIRKLVALTREEPREQKNDQLRSYSNKVIIDANRVLLYMWEFKDCRESIKKLLWSH 825
            D  L +++  L+     +++N A Y+ HL F D++ K +IR    I LLV LLDH   +  R+A GALRNL YGK  +DNKIA+  CGGI A VRLL +T+ +E+R+ VTG+L NLSS ++LK+ ++++A+  +   +I+P SGWE       R+  + S S +LRNATG LRNVSSAG EAR  +R   +GL DA L+++++A+GS    +I++K +EN +C LRN+SY++  E  +                          H  T++ DG      NG               +DA  +GC G KKK  K + +  G  PL    +P                  P G+++LW P+ V  Y+ +++  +NP TLE AA A+ NL  G W W+  +R  VR  +GLP L +LL +D + VV +VA ALRN+A+D  NK  IG +A   LV  LP    +  T +K  S+ T+ A+   L  ++ K+  N+K +++A GI KLV +++      K D+   +S KV+  A++VL  MW+++D R   KK  WS 
Sbjct:  549 DPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEIRELVTGVLWNLSSCDALKMPIIQDALAVLTNAVIIPHSGWENSPLQDDRKIQLHS-SQVLRNATGCLRNVSSAGEEARRRMR-ECDGLTDALLYVIQSALGS---SEIDSKTVENCVCILRNLSYRLAAETSQG------------------------QHMGTDELDGLLCGEANG---------------KDAESSGCWGKKKKKKKSQDQWDGVGPLPDCAEP------------------PKGIQMLWHPSIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKWSVYIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNNSNNTASKAMSDDTVTAVCCTLHEVITKNMENAKALRDAGGIEKLVGISKS-----KGDK---HSPKVVKAASQVLNSMWQYRDLRSLYKKDGWSQ 1033
The following BLAST results are available for this feature:
BLAST of TCONS_00070517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTND23.691e-9536.94Catenin delta-2 OS=Homo sapiens GN=CTNND2 PE=1 SV=... [more]
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