TCONS_00070035-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070035-protein
Unique Name	TCONS_00070035-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	101

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070035-protein ID=TCONS_00070035-protein|Name=TCONS_00070035-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MDDKPCLLFCDTFVHESHDEIQLDLIGFARPVAISEIRVIPKGCKVHPEI
NDRLGETKPSSFKLELFIKNLSQPRAAVFEKLGILDYEEGKSIQLISNSK
V

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043602	XLOC_043602	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070035	TCONS_00070035	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031801	VIR_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031801	Virilizer, N-terminal	PFAM	PF15912	VIR_N	coord: 4..101 e-value: 4.4E-33 score: 115.0

Blast

[Close]

BLAST of TCONS_00070035-protein vs. Swiss-Prot (Human)
Match: VIR (Protein virilizer homolog OS=Homo sapiens GN=KIAA1429 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.660e-20
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0

Query:    7 LLFCDTFVHESHDEI-QLDLIGFARPVAISEIRVIPKGCKVHPEI--NDRLGETKPSSFKLELFIKNLSQPRAAVFEKLGILDYEEGKSIQLISNSKV 101
            LLF DTF H S ++   +D++ F   V I+E+RVIP G + H  +  N   GET P +F+L+LF  N+S+P A VF++LG L+Y+E  SI    NSKV
Sbjct:    9 LLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYGETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKV 106

The following BLAST results are available for this feature:

BLAST of TCONS_00070035-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070035-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VIR	2.660e-20	45.92	Protein virilizer homolog OS=Homo sapiens GN=KIAA1...	[more]

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TCONS_00070035-protein (polypeptide) - C. hemisphaerica