TCONS_00069394-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069394-protein
Unique Name	TCONS_00069394-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	720

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069394-protein ID=TCONS_00069394-protein|Name=TCONS_00069394-protein|organism=Clytia hemisphaerica|type=polypeptide|length=720bp
LSTDPDYHMKYFSFISLIHTHFFRKHKYHTKKGKMHLLKKLLILLQMHHT
NTFYVDSMKTMTLSQNYKPIEAQFWQRYSFVIVQSHTQHQNSTLSYNAHT
EYGQSYQSLNSGLIQRIDDSYSRNVEMYVKSSKAEMVNAVLLAVPVENRY
PIPGGCCLTCALENDPNIKIKYDEFKTSVTFHRASKYYSSQSTPGCDNSE
KPATYDLVYDVYYYYIDQNNYEEDALFDALYAMSTPTRIRLNGIKLTTIK
SQESLSVDIETLFAQGIVLNVIVSDSSSGTDLETAYVPAAVYACNFTASE
DSPNNCQARGSTTVLIFCISFAVLGFLLSVAGFKCFRLFVFSSGVAFYWF
IIFIVMSRYLDPNEESRQDTLMISFLISLVGGGFTLFLYGFEKCFYLVFH
KTCLVFGMFLSAIIFYTPFGYFEVWNEDYRFILMFACFALFFSMVCLFIP
KAACYLSSSLIGSYAVIMVPNYFLRGNMQYIILTIVNRITVFKFGYLYLR
RPYDQVEYILTGVWGGLFILGCIIQYCTTKDQDFQYSGKQLRHKVWSKIG
ESVNLSKKNKSRKQKNIRRPVPARQYQRSPPPQEERRPLLADDHLQPTFG
GYGGFDEPPQQVVEHYPEHHQPLLHQPLFVGYVSSTEVEPTAPRPSAPVQ
HSPPNSAPPPYQFTDNTTNQDLDSINNQNVDQNLIDFDERPLQNVEHLVL
NDEDQRATYRKPSERYPKVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043247	XLOC_043247	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069394	TCONS_00069394	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025256	DUF4203
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025256	Domain of unknown function DUF4203	PFAM	PF13886	DUF4203	coord: 316..526 e-value: 7.9E-24 score: 84.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 555..610
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 636..672
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 312..499 e-value: 4.93201E-5 score: 43.4565

Blast

[Close]

BLAST of TCONS_00069394-protein vs. Swiss-Prot (Human)
Match: TM7S3 (Transmembrane 7 superfamily member 3 OS=Homo sapiens GN=TM7SF3 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.675e-56
Identity = 145/529 (27.41%), Postives = 259/529 (48.96%), Query Frame = 0

Query:   79 SFVIVQSHTQHQNSTLSYNAHTEYGQSYQSLNSGLIQRIDDSYSRNVEMYVKSSKAEMVNAVLLAVPVENRYPIPGGCCLTCALENDPNIKIKYDEFKTSVTFHRASKYYS-SQSTPGCD-NSEKPATYDLVYDVYYYYIDQNNYEEDALFDALYAMSTPTRIRLNGIKLTTIKSQESLSVDIETLFAQGIVLNVIVSDSSSGTDLETAYVPAAVYACNFTASEDSPNNCQARGSTTVLIFCISFAVLGFLLSVAGFKCFRLFVFSSGVAFYWFIIFIVMSRYLDPNEESRQDTLMISFLISLVGGGFTLFLYGFEKCFYLVFHKTCLVFGMFLSAIIFYTPFGYFEVWNEDYRFILMFACFALFFSMVCLFIPKAACYLSSSLIGSYAVIMVPNYFLRGNMQYIILTIVNRITVFKFGYLYLRRPYDQVEYILTGVWGGLFILGCIIQYCTTKDQDFQYSGKQLRHKVWSKIGESVNLSKKNKSRKQKNIRRP---VP---ARQYQR---------SPPPQEERRPLL 590
            +F+I Q H+Q+QN+T+S++       S     SGL+  +    S     Y+ +S  + V  + + +    R P+PGGC L   L+ DPNI ++Y+ F+T++ F  A+  Y+     P CD  +++ + + L YDVY Y++ +N+  E+ L   L  M +  +++ + +K+ T+ + +  SV   +L  QG++ NVIV D    T    AY+PA  YAC+F A E S   C + G  +  +F   FA+LGF +   G + ++  +F  G     F  +I+++R L P +      L+++ +   VGG F + ++       +      LV G  +S++ F+TP G  +++++D  F + F+C A+   +V +   +    L+  +IGSY+V++  + +   ++ YI L ++ R     F   +   P+   ++I+  VWG L + G  +Q    + + F        +K+W          K+ + R+  NI  P   +P    R Y R            P  ER PLL
Sbjct:   63 TFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQS-TCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYDVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDKTSVSFSSLPGQGVIYNVIVWDPFLNTS--AAYIPAHTYACSFEAGEGS---CASLGRVSSKVFFTLFALLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITR-LTPIKYDVN--LILTAVTGSVGGMFLVAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVPFQTNDFIILAVWGMLAVSGITLQIRRERGRPFF---PPHPYKLW----------KQERERRVTNILDPSYHIPPLRERLYGRLTQIKGLFQKEQPAGERTPLL 569

The following BLAST results are available for this feature:

BLAST of TCONS_00069394-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069394-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM7S3	2.675e-56	27.41	Transmembrane 7 superfamily member 3 OS=Homo sapie...	[more]

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TCONS_00069394-protein (polypeptide) - C. hemisphaerica