TCONS_00067732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067732-protein
Unique NameTCONS_00067732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length407

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067732-protein ID=TCONS_00067732-protein|Name=TCONS_00067732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
CKCMHHTPQIKFCIAPIDRSKMDIEVEQNEKENDEEQTINSSSESSDSES
DSTLPRTLTAPTKLDRHGFIVGHRLHDKVSSLPNPGYTTTIGKRRERKWL
SMFVNWDSYIRRNPKQLRRRCRKGIPQAVRSLAWQHLCGAHKLHEQNPKL
FDKLLESEEGSKWSNIIKRDIPRTFRHHTMFKEDKGLGAGQLYQVLLAFS
AHVPTIGYNQALAPLAAVMLMHMPPDECFWVLVSVCRYYVPGYYGDKMEA
MRLDGLIFERLLRKYLPYIYRHMKSYNIDPLMYIVEWFVCVFARCLPFQT
VLRVWDVFFCEGVKVLFKVGLAILKLVFPSASSLSDKDDFQTTQILLDLP
KDVTIDTILIPEVLKYNIEEREFQKFHQDVYRENPELSLSRYFSLNVKLD
EQDEESD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042295XLOC_042295Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067732TCONS_00067732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availableGENE3D1.10.8.270coord: 141..236
e-value: 6.4E-17
score: 61.1
NoneNo IPR availableGENE3D1.10.10.750coord: 93..139
e-value: 3.1E-15
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..59
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 121..335
e-value: 1.9E-55
score: 200.2
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 127..326
e-value: 1.0E-51
score: 175.5
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 124..312
score: 34.408
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 248..359
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 96..272

Blast
[Close]
BLAST of TCONS_00067732-protein vs. Swiss-Prot (Human)
Match: TB10A (TBC1 domain family member 10A OS=Homo sapiens GN=TBC1D10A PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.364e-90
Identity = 144/365 (39.45%), Postives = 216/365 (59.18%), Query Frame = 0 
Query:   15 APIDRSKMDIEVEQNEKENDEEQTINSSSESSDSESDSTLPRTLTAPTKLDRHGFIVGHR-LHDKVSSLPNPGYTTTIGKRRERKWLSMFVNWDSYIRRNPKQLRRRCRKGIPQAVRSLAWQHLCGAHKLHEQNPKLFDKLLESEEGSKWSNIIKRDIPRTFRHHTMFKEDKGLGAGQLYQVLLAFSAHVPTIGYNQALAPLAAVMLMHMPPDECFWVLVSVCRYYVPGYYGDKMEAMRLDGLIFERLLRKYLPYIYRHMKSYNIDPLMYIVEWFVCVFARCLPFQTVLRVWDVFFCEGVKVLFKVGLAILKLVFPSASSLSD-KDDFQTTQILLDLPKDVTIDTILIPEVLKYNIEEREFQKFH 377
            AP     +    E   +  D   T   SS  SDSE++    R      ++D+ GFIVG +     +  +P       + ++RE KWL M  NWD ++ +  K++R RC+KGIP ++R  AWQ+L G     +QNP  FD+L  S    KW ++I+RD+ R F  H MF    G G   L++VL A++ + P  GY QA AP+AAV+LMHMP ++ FW LV +C  Y+PGYY +K+EA++LDG I   LL+K  P  ++H+    IDPL+Y+ EWF+C F+R LP+ +VLRVWD+FFCEGVK++F+VGL +LK    S   +   +  ++T + L  L   +  +  L+ EV++  + ER+ ++ H
Sbjct:   12 APAAGESLSGTRESLAQGPDAATTDELSSLGSDSEANGFAER------RIDKFGFIVGSQGAEGALEEVP-----LEVLRQRESKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSGGKVKLQQNPGKFDELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLKHALGSPEKVKACQGQYETIERLRSLSPKIMQEAFLVQEVVELPVTERQIEREH 365
The following BLAST results are available for this feature:
BLAST of TCONS_00067732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TB10A2.364e-9039.45TBC1 domain family member 10A OS=Homo sapiens GN=T... [more]
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