Solute mitochondrial carrier (polypeptide) - C. hemisphaerica

Overview
NameSolute mitochondrial carrier
Unique NameTCONS_00067534-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067534-protein ID=TCONS_00067534-protein|Name=Solute mitochondrial carrier|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MLSSTSTKPCPQQATKQTLITTPPAAIKKPSRKSFLVNFVAGGVAGTTGV
IVTSPLDVVQTRLQSSFVKLTPASASNLATANGVVTAANNSNRFGFLVYS
YMKHIAKTEGFFGLYKGLVPNLMGIAPSRAIYFAVYSKSKAFFTSTQLSN
SSWTHMLSALSASWSVSTLTNPIWFVKTRMQLDLSATGQQRRITDVVKEV
FKNEGIGGFYRGLCASYVGASETMIYFVLYERMKILMGSTSENEKLSPVG
YICSAFLSKCCATVAVYPHEVARTRLRQESVRSAKDKLYKGFLQTLQKVY
RDEGWTGLYGGMGAHLMRQVPNTVIMFLTYESIVNFLSHE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042176XLOC_042176Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067534TCONS_00067534Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 51..65
score: 26.23
coord: 165..183
score: 23.38
coord: 38..51
score: 31.97
coord: 255..277
score: 27.16
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 151..237
e-value: 4.1E-19
score: 68.2
coord: 246..338
e-value: 9.3E-20
score: 70.3
coord: 33..144
e-value: 2.4E-23
score: 81.8
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 33..142
score: 24.53
coord: 246..336
score: 22.513
coord: 150..236
score: 18.566
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 29..337
e-value: 1.1E-79
score: 266.8
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 32..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Blast
[Close]
BLAST of Solute mitochondrial carrier vs. Swiss-Prot (Human)
Match: S2536 (Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.714e-79
Identity = 142/320 (44.38%), Postives = 193/320 (60.31%), Query Frame = 0 
Query:   31 SRKSFLVNFVAGGVAGTTGVIVTSPLDVVQTRLQSSFVKLTPASASNLATANGVVTAANNSNRFGFLVYSYMKHIAKTEGFFGLYKGLVPNLMGIAPSRAIYFAVYSKSKAFFTSTQLSNSSWTHMLSALSASWSVSTLTNPIWFVKTRMQLDLSATGQQRR-ITDVVKEVFKNEGIGGFYRGLCASYVGASETMIYFVLYERMKILM-----GSTSENEKLSP------VGYICSAFLSKCCATVAVYPHEVARTRLRQESVRSAKDKLYKGFLQTLQKVYRDEGWTGLYGGMGAHLMRQVPNTVIMFLTYESIVNFLS 338
            S++  LV+  AGG  GT G I+T PL+VV+TRLQSS V L   S   L T  G   + N     G L    +K I + EG   L++GL PNL+G+APSRAIYFA YS  K         +S+  HM+SA  A ++  T TNPIW +KTR+QLD    G++R    + V++V++ +G+ GFYRG+ ASY G SET+I+FV+YE +K  +      ST EN++ S       VG + +A  SK CAT   YPHEV RTRLR+E  +      Y+ F QTL  + ++EG+  LY G+  HL+RQ+PNT IM  TYE +V  L+
Sbjct:    2 SQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLY-ISEVQLNTMAGA--SVNRVVSPGPL--HCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVFDPDSTQVHMISAAMAGFTAITATNPIWLIKTRLQLDARNRGERRMGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRLREEGTK------YRSFFQTLSLLVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYELVVYLLN 310
The following BLAST results are available for this feature:
BLAST of Solute mitochondrial carrier vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25366.714e-7944.38Solute carrier family 25 member 36 OS=Homo sapiens... [more]
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