TCONS_00067352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067352-protein
Unique NameTCONS_00067352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067352-protein ID=TCONS_00067352-protein|Name=TCONS_00067352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MFSAVSHLLRHAQMVGPTQAARQYAVAKRKMIRKEYFVYRPKMKSRYRGN
PNPRLKLLLLEDVENIGMRHDIVEVKRGIGRWDLIPNKLAVYATEENLVK
LGMDPNRLKEDNSIKVPLNVLKYLQKHEIKLVTPQTSDLDQNWLISLHDI
SEYFFRAGRLRVPVTCMNVTESMDNVIREVGKYTVQVTLNNTITVDVPLV
VTERPIDPEKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042087XLOC_042087Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067352TCONS_00067352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020070Ribosomal_L9_N
IPR009027Ribosomal_L9/RNase_H1_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
20406080100120140160180200Score = SequencePF01281G3DSA:3.40.5.10SSF55658
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 56..99
e-value: 1.8E-15
score: 56.1
IPR020070Ribosomal protein L9, N-terminalGENE3D3.40.5.10coord: 56..102
e-value: 4.1E-15
score: 54.5
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 55..101

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20406080100120140160180200Sequence
Match NameE-valueIdentityDescription
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