TCONS_00067321-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067321-protein
Unique Name	TCONS_00067321-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	396

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067321-protein ID=TCONS_00067321-protein|Name=TCONS_00067321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MIRKSSSHSDEATSTKKQRMPGSQLRNFSIKPVHKFNQGFPYFRQPIEFG
HFSLDGQRRFHNDSSQLKSFQPPHVDYDLEYDLRDGYDSHIEKDDDIKER
LTHLLTWIKRNTNKFRLNNENAKEHVHQLNTDFVAWRGHFTKFLCTPYET
REPWKMAVTLFNGTIYISEVETEKAEFDHKHRSPRQKEMCYWGFRFEGYL
TKPMHEACDEEEEKQPKVTNTNEAYCSIVRTRLKNHSILIGAEVDCCVKD
SKAAPPLNYVELKTSRIMQHFKQRMNFSRYKLLKFWAQSFLVGLPKIVVG
LRDDEGIVHELKTYKTMEIPQVCKEFRNCWDPNICMNFLDKLLSWLKQIV
TIDNKDVVYMLRFEPPFDTIQVELIDDGSECFLPDWFIESFQSQEE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042072	XLOC_042072	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067321	TCONS_00067321	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013961	RAI1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013961	RAI1-like	PFAM	PF08652	RAI1	coord: 244..310 e-value: 4.9E-24 score: 84.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Blast

[Close]

BLAST of TCONS_00067321-protein vs. Swiss-Prot (Human)
Match: DXO (Decapping and exoribonuclease protein OS=Homo sapiens GN=DXO PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 7.963e-86
Identity = 139/362 (38.40%), Postives = 212/362 (58.56%), Query Frame = 0

Query:   36 FNQGFPYFRQPIEFGHFSLDGQRRFHNDSSQLKSFQPPHVDYDLE-YDLRDGY-DSHIEKDDDIKERLTHLLTWIKRNTNKFRLNNENAKEHVHQLNTDFVAWRGHFTKFLCTPYETREPWKMAVTLFNGTIYISEVETEKAEFDHKHRSPRQKEMCYWGFRFEGYLTKPMHEACDEEEEKQPKVT---NTNEAYCSIVRTRLKNHSILIGAEVDCCVKDSKAA-PPLNYVELKTSRIMQHFKQRMNFSRYKLLKFWAQSFLVGLPKIVVGLRDDEGIVHELKTYKTMEIPQVCKEFRNCWDPNICMNFLDKLLSWLKQIVTIDNKDVVYMLRFEPPFDTIQVELIDDGSECFLPDWFIESF 391
            ++  FP++R+P E G FSLD QR++H D+  L+ + PP  +     +DLRDGY D +  +D++++ERL HLL W+  +  +         E +       V WRGH TK L TPYE +E W++A + F GT+Y+SEVET  A      R P  +E+ Y G++FE Y+       C ++    P  +   NTN A+CS++R+RL +H +L   EVDC    + +  PP  YVELKTS+ M    Q  +F R+KLLK+WAQSFL G+P +V G R+ +G V  LKT+ TM++ +  +  R+ W+P++CMNF    LS+ +  V  D+  +V++  +E P   + V +  D    FLP W++E+ 
Sbjct:   36 YSGPFPFYRRPSELGCFSLDAQRQYHGDARALRYYSPPPTNGPGPNFDLRDGYPDRYQPRDEEVQERLDHLLCWLLEHRGRLEGGPGWLAEAI-------VTWRGHLTKLLTTPYERQEGWQLAASRFQGTLYLSEVETPNARAQRLARPPLLRELMYMGYKFEQYM-------CADKPGSSPDPSGEVNTNVAFCSVLRSRLGSHPLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPNVVAGFRNPDGFVSSLKTFPTMKMFEYVRNDRDGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVHLFSWE-PGGPVTVSVHQDAPYAFLPIWYVEAM 382

The following BLAST results are available for this feature:

BLAST of TCONS_00067321-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067321-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DXO	7.963e-86	38.40	Decapping and exoribonuclease protein OS=Homo sapi...	[more]

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TCONS_00067321-protein (polypeptide) - C. hemisphaerica