TCONS_00067310-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067310-protein
Unique NameTCONS_00067310-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067310-protein ID=TCONS_00067310-protein|Name=TCONS_00067310-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
RDLLADDKIWVETLNEVVHVATPVKIRRTFCTILIHGEPNNPAELWETFR
EHMIQYFLRQHSELQAEQMTLSKIADMLHQFGKSLQDFNLPDFDIEIVQE
QPDAAANRGEADQIRPTLNEAQTTAADAVIDAVSNNDFNSAKLFFIDGPG
GAGKTYMYNYVIKEARARSFTVSTSSWTGIAATLLDVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042065XLOC_042065Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067310TCONS_00067310Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
molecular_function GO:0003678 DNA helicase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
RDLLADDKIWVETLNEVVHVATPVKIRRTFCTILIHGEPNNPAELWETFREHMIQYFLRQHSELQAEQMTLSKIADMLHQFGKSLQDFNLPDFDIEIVQEQPDAAANRGEADQIRPTLNEAQTTAADAVIDAVSNNDFNSAKLFFIDGPGGAGKTYMYNYVIKEARARSFTVSTSSWTGIAATLLDVV20406080100120140160180Expect = 8.2E-5 / Score = 21.5Expect = 9.0E-14 / Score = 51.3Score = SequenceG3DSA:3.40.50.300PF05970SSF52540
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 92..186
e-value: 8.2E-5
score: 21.5
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 117..186
e-value: 9.0E-14
score: 51.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 114..182

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067310-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
RDLLADDKIWVETLNEVVHVATPVKIRRTFCTILIHGEPNNPAELWETFREHMIQYFLRQHSELQAEQMTLSKIADMLHQFGKSLQDFNLPDFDIEIVQEQPDAAANRGEADQIRPTLNEAQTTAADAVIDAVSNNDFNSAKLFFIDGPGGAGKTYMYNYVIKEARARSFTVSTSSWTGIAATLLDVV20406080100120140160180Sequence
Match NameE-valueIdentityDescription
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