TCONS_00067219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067219-protein
Unique NameTCONS_00067219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067219-protein ID=TCONS_00067219-protein|Name=TCONS_00067219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MVKVGINGFGRIGRLVCRAAFEHEEIEVVAINDPFIDLDYMVYMFTYDST
HGRFKGTVSSTDGKLIINGKPITVSMCRNPAEIQWAAAGAEMVVESSGVF
TTNEKASAHMTGGAKKVIISAPSADAPMFVMGVNEDKYDAAKMHVVSNAS
CTTNCLAPLAKIINDNFGIEEGLMTTVHATTATQKTVDGPSMKKWRDGRG
ASQNIIPATTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLKK
GASYDEIKAVIKKASEDPTLGRYMGYTEDQVVSMDFLGDTRSSIFDAQAG
IALSPQFVKLVSWYDNEYGYSHRVCDLIKYMATKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041993XLOC_041993Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067219TCONS_00067219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020831GlycerAld/Erythrose_P_DH
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR006424Glyceraldehyde-3-P_DH_1
IPR020829GlycerAld_3-P_DH_cat
IPR020830GlycerAld_3-P_DH_AS
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006006glucose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0050661NADP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006006 glucose metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051287 NAD binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPRINTSPR00078G3PDHDRGNASEcoord: 172..188
score: 78.69
coord: 229..246
score: 80.32
coord: 270..285
score: 48.18
coord: 109..122
score: 73.02
coord: 145..163
score: 81.41
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPIRSFPIRSF000149GAPDHcoord: 1..335
e-value: 7.6E-127
score: 421.1
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainSMARTSM00846gp_dh_n_7coord: 2..151
e-value: 4.5E-97
score: 338.5
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainPFAMPF00044Gp_dh_Ncoord: 2..102
e-value: 4.7E-38
score: 129.5
IPR006424Glyceraldehyde-3-phosphate dehydrogenase, type ITIGRFAMTIGR01534TIGR01534coord: 3..326
e-value: 4.2E-132
score: 438.3
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domainPFAMPF02800Gp_dh_Ccoord: 156..314
e-value: 6.1E-67
score: 224.0
NoneNo IPR availableGENE3D3.30.360.10coord: 161..316
e-value: 2.6E-79
score: 264.5
NoneNo IPR availableGENE3D3.40.50.720coord: 1..160
e-value: 6.5E-82
score: 272.7
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 150..314
IPR020830Glyceraldehyde 3-phosphate dehydrogenase, active sitePROSITEPS00071GAPDHcoord: 149..156
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..167

Blast
[Close]
BLAST of TCONS_00067219-protein vs. Swiss-Prot (Human)
Match: G3P (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 508.834 bits (1309), Expect = 0.000e+0
Identity = 246/334 (73.65%), Postives = 286/334 (85.63%), Query Frame = 0 
Query:    2 VKVGINGFGRIGRLVCRAAFEHEEIEVVAINDPFIDLDYMVYMFTYDSTHGRFKGTVSSTDGKLIINGKPITVSMCRNPAEIQWAAAGAEMVVESSGVFTTNEKASAHMTGGAKKVIISAPSADAPMFVMGVNEDKYDAAKMHVVSNASCTTNCLAPLAKIINDNFGIEEGLMTTVHATTATQKTVDGPSMKKWRDGRGASQNIIPATTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLKKGASYDEIKAVIKKASEDPTLGRYMGYTEDQVVSMDFLGDTRSSIFDAQAGIALSPQFVKLVSWYDNEYGYSHRVCDLIKYMATKQ 335
            VKVG+NGFGRIGRLV RAAF   ++++VAINDPFIDL+YMVYMF YDSTHG+F GTV + +GKL+ING PIT+   R+P++I+W  AGAE VVES+GVFTT EKA AH+ GGAK+VIISAPSADAPMFVMGVN +KYD + + ++SNASCTTNCLAPLAK+I+DNFGI EGLMTTVHA TATQKTVDGPS K WRDGRGA QNIIPA+TGAAKAVGKVIPELNGKLTGMAFRVPT +VSVVDLT RL+K A YD+IK V+K+ASE P  G  +GYTE QVVS DF  DT SS FDA AGIAL+  FVKL+SWYDNE+GYS+RV DL+ +MA+K+
Sbjct:    4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNS-LKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKG-ILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
The following BLAST results are available for this feature:
BLAST of TCONS_00067219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G3P0.000e+073.65Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
back to top