TCONS_00067219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067219
Unique NameTCONS_00067219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1722

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067219 ID=TCONS_00067219|Name=TCONS_00067219|organism=Clytia hemisphaerica|type=transcript|length=1722bp
CGCCGCGCTCGCTCGCAACTGCTGATTTCGCAGGCTATTGAAGAACACTC
GTGAACCAAGAAATTTGACACTGGGGAGATAAAAAATCTCAGCTGGCTAT
TCCGGTATCATTTAGGATTTTCCGTAATAGTGACTACCCGGTCGGTTTTA
TCGTTCGGTAAATTATCCTTTGTGTACGAAATAAACAATAAATTTACTAG
TCGTGTCAGCAAAAGTTGTGCAGAGCAGCTTCGTGAGCAAAACCTCAAGG
TCATCACATCGTGCAATCTTCCACGTGTTTCTACATTTCCAGATTCTTAC
TTCAACTCTTCACCCCAGaaaCTTAAACAATCAAAATGGTCAAGGTTGGT
ATCAATGGATTCGGACGTATTGGACGATTGGTGTGCCGTGCAGCTTTTGA
GCATGAAGAAATTGAAGTAGTCGCCATCAATGATCCTTTCATTGATTTGG
ACTACATGGTCTACATGTTCACCTACGACTCAACCCATGGACGCTTCAAA
GGAACTGTCTCATCTACTGATGGAAAACTTATCATCAATGGAAAACCAAT
CACAGTTTCTATGTGCCGTAACCCAGCTGAAATTCAATGGGCTGCTGCTG
GAGCTGAAATGGTTGTTGAATCATCTGGCGTTTTTACAACCAACGAGAAA
GCCTCTGCTCACATGACTGGTGGTGCAAAGAAAGTCATCATCTCAGCTCC
TTCAGCTGACGCACCGATGTTCGTCATGGGTGTCAACGAAGATAAATATG
ACGCTGCTAAAATGCATGTTGTCAGCAATGCTTCATGCACCACCAACTGT
TTGGCACCCCTTGCCAAGATCATTAACGACAACTTTGGAATCGAAGAAGG
CTTGATGACTACTGTCCATGCTACCACTGCTACACAAAAAACTGTCGATG
GACCATCCATGAAAAAATGGAGAGACGGTCGTGGTGCCAGCCAAAACATC
ATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGCAAAGTCATCCCTGA
ATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGTCCCCACACCTGACG
TCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAGGTGCCAGTTACGAT
GAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGACCCAACTCTTGGACG
CTACATGGGATACACCGAAGACCAAGTTGTCTCAATGGACTTCTTGGGTG
ACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTATTGCTTTGAGCCCA
CAATTCGTCAAACTCGTCTCATGGTATGACAACGAGTACGGATACAGTCA
TCGTGTCTGTGATTTGATCAAATATATGGCCACTAAACAATGAACTTCAA
AATTGTAACAGCAACGTAGTCCATTACTCATTGTAGCAACGGCAAACAAC
GAAGTCCGTTTGTTACCATTCTTCCCTGTTACTGTTCTTCTTATTCTTAT
CTCTCTTCTCTAGAAAAACTGAAACATTATATTTATGAATGAATTGTAAT
GTAGAAATTGCAATTGTAACTTAGATAATAATTGATATGCACTATTTTTA
CACCAATTACTTGTAGATTTAACACTATTTCTCGTCTTCCATACGgaaat
gcaattaaaaattgaatgatAAATGCAaatatgttttcttttcttttttg
gttcCCAACATTTTATACAGTGTaggttttaaccctattcatactaggct
tttaggggtggCTCAAAAGGGG
Run BLAST on NCBI

protein sequence of TCONS_00067219-protein

>TCONS_00067219-protein ID=TCONS_00067219-protein|Name=TCONS_00067219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MVKVGINGFGRIGRLVCRAAFEHEEIEVVAINDPFIDLDYMVYMFTYDST
HGRFKGTVSSTDGKLIINGKPITVSMCRNPAEIQWAAAGAEMVVESSGVF
TTNEKASAHMTGGAKKVIISAPSADAPMFVMGVNEDKYDAAKMHVVSNAS
CTTNCLAPLAKIINDNFGIEEGLMTTVHATTATQKTVDGPSMKKWRDGRG
ASQNIIPATTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLKK
GASYDEIKAVIKKASEDPTLGRYMGYTEDQVVSMDFLGDTRSSIFDAQAG
IALSPQFVKLVSWYDNEYGYSHRVCDLIKYMATKQ
Run BLAST on NCBI

transcript from alignment at scaffold_466:181953..189522-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067219 ID=TCONS_00067219|Name=TCONS_00067219|organism=Clytia hemisphaerica|type=transcript|length=7570bp|location=Sequence derived from alignment at scaffold_466:181953..189522- (Clytia hemisphaerica)
CGCCGCGCTCGCTCGCAACTGCTGATTTCGCAGGCTATTGAAGAACACTC
GTGAACCAAGAAATTTGACACTGGGGAGATAAAAAATCTCAGCTGGCTAT
TCCGGTATCATTTAGGATTTTCCGTAATAGTGACTACCCGGTCGGTTTTA
TCGTTCGGTAAATTATCCTTTGTGTACGAAATAAACAATAAATTTACTAG
TCGTGTCAGCAAAAGTTGTGCAGAGCAGCTTCGTGAGCAAAACCTCAAGG
TCATCACATCGTGCAATCTTCCACGTGTTTCTACATTTCCAGATTCTTAC
TTCAACTCTTCACCCCAGGTAATATAGCCATCACTTTGTTTCACAGTCAG
CAATATGAAAGGTTATCTCTATCAGCAAGATGTAGCTAGAATTATTTTAA
AGCCGCCTTTTCATTCAGGCGACTAAAATTTGAAGTTTCCAATAGTTTGG
TAGCTATACAATATATCTCTCTCTTTATACTAGAAGAATTTCATATTTTG
TGTCTAGGTCACGCTAAAATGATAGACCAGCTGTGATTGCGAAAGGTTTG
TCAGGGGGTTGCTTTGCGTATTAAAGAAGAAGAGTTTTGTGCAGTTTTAA
GAGAATATCTCTTCTTTTTTTTTTTAAATCAGTGCATTTATAAGTCGTGA
TTTAATTATTTGTTCAAAATTTTATCAATCATCCATGATTGAGCAGGAAA
ATTAGCACTACTTTCTGATGAAACCCATGTCCAATCAAAATTCAAAAATC
ATGTGACGTCAAATTTTTGAATTTAAGAAGGCGTGGCACTTTCTACAAAA
TAGTTACCAAAACGAGTTTTTAAGGTCACTGCATATAACAGGTTAAAAGT
AGAGGTCTTCCGCATGAAAACTGGATATAAGTACTTACCTCTTTGTACCT
CTTTTTGGCTTCTGCTTGAACAGCTCATCCAACTCGTTGAGTCAGATGCT
TCGACATTTCCTTGAGGCTGTTGGAGTCAGCTTGCCTAAGGTTGAAATAA
TGGGCAAGCAGAGGTTCGTCCGGAACAGTTGTGAGGAAGGTGTCTAAGTG
TTTTTTGAATACTTCTTTGGGGCAGTTTATCAAATCTCTTATTGGTCTGG
GAAGGGTGTTGAATAATCAAGGGCCTTCTTGGAAAAGACTTCCCTCCGGT
TATTTTTGTGTTTAATATTGACAGCTTTTAGATTACAAATTCTCCCCAAT
CTCTAATTTATATGGTAGGAAATGCCTCCTTTACTTTTGTCATAATCAAA
CTCGGGACGTAGCCTTCAATGACCTTCCTGACTCACTTGACTGAACAACA
TAGGTCTATCAACCCTTTGCGACTCTTCTGACAAACTCTGCCCATCAGCT
TGGTAACATCCGTGTGTTTTCATATGTAAATGTTGACATTTTCATATTGT
TGATGCTTTTCTAATTTCCTCAATGCTGATTGGTTCAGGATTATTTTCGT
TTTCGTAATTTGGGTTAAGTTTGTTTATTGCATTATCATCAAAAGGAAAT
TTTTTGTTGAAATATTCTTTGAAATGTTCTTCCCAGCATTTTAAAACGTT
GTTTATGTTTGTTTGATTGTTACCTTATCGCTAATCGTGTTGATGGGTTT
CTTGGGTTTCCCTTCAAGTTCTTTTAGAGATTTGAAAAGGTTGTGGCTGT
TATTATTTTGAAAGTCTTTTTCCATTTGGTTTATTTTCACTTCTAATTTT
AGGGATTTAAATTTTATTTCTCTCTTCACAGAGTTATTTAGAGTCCTGTA
TCTTTCTTTAATGTCGGGGTCTCTGGGATGCTTGATGAAATTAATTCTTG
CTTGTCTACGTTGGTGACAAAGTAATGCTACGTTTTCTCCAAATCCTTCA
GTTCGTTTATTTCTAAGTCGTCCAACGGTTTCCTCAGTAGCTTTGTTTGT
AGTGGTTTTGAAATGATGTTCCAGGTATAAATTATTTGATACCGCTCTTT
CCGTCTTTCAAGGCTATACAGTTTTACTGATTTGAGTTTTTTCAATAATT
AAAATGTCTGAGGGATGGAATTCCATGTAAAAATGATTTCTGAACTTCTT
TCAGTTGCTGGATAAGACCGCGCTTCCAGGGAGACCAGAGTTGAGAACAG
TAGTTCAAATGAAGGATATCTAGTGCTTGTCTAAAGTTAACATGGTTTCA
ATTTTCCTTGATTTGAATGTGCGGTATATCCATGCCAGTCCATGCACTTA
TATTTTTTACTTTTTTAATTTGTTCTTGGATATGTTTCTCATAAGTCAAC
TGAGTGTCTAGGGTGACTCTGAGGTCTTTAACTTTGTCTTTATTTTCGAT
CAGCGTTGCTGTGTCAGAAAAATAGCGAGAACTTTGCTTCAGAGCGTCGT
TTTTCCCGTAGGCAAGGTGCTCTAATTTAAGACCATTCAGCTGCATGTTG
TTGTCTTCTGTCCACTTATAGACAGTGTCTAGATCATTTTGTAGATGATA
AACATCCTCCAGTTTGGATATGTTCGGTCGTCAGCAAACGATGCCAATAT
AGAATGAAGGATGTTGTCATCGATATCTTGAATCATGATTAGGAACAATA
GCAGTCCAAGCACAGATGCTTGTGGCACACCTGAAATAACATCTGTTTCT
GAGGACAAGGCTGAGTTTACTGAAACTCTGTGTTCGATGAGTCAAAAAGG
ATGGCTGATCCTTTCAAGGTGTTTACCGTTTATGCCATTTTTCTGAAGCT
TGTGTAACAAAATGGTGTGGTCTGCTCTATCAAAAGCTTTACTGAAGTCT
AAATAGATAACGTCAATGTTGTTTCCATTCTCTAGGTAATGGATCAGTCT
TTCGGTGTGTTAAAGCAATTTATTTAAGTCGTCATATCCTGTAAGCTGCA
TAATTTCTATGGTTGTTTAGAAATCTAATTAATTATTATTTTGTTCTTTT
GAGGCGCTCCAACCTCGAATTCTTTAAATGAGCAAGATTTTAATTAGTTT
TATTCTTATACACTGTTAATATAATTGACACTCCAATGTAACGTTTTATT
GTTTGATCTAAGTTTTGGATTCGTTTGGGAAGTTGAAAAGTGACTGATTT
TTTGGCAAAGCTGTACGATGGCCGGCGAAAGTTGAAACTTTATTGTGGTC
TTAAGTATCAAATTTTAAGATTTTCCACTGAAAGAAAAATTAACTTCACA
GTGGAAATCTTAATTAATTGAGAAAACGGGAAGGGGATTTTCTTGACTTT
CTGGATTTTACAGGATTTTAAAGTACATTTCAAATTAGCTGGCAGTGAAT
TTTCAATTCCGTATTACTTTTGATAGATTTTGAATTAGATAGCGATTTTG
TACTTTTTGGAAAGGTAATCCGGAGTGGAATATTATGCGTATAAAATTGT
TCTAAAATTTTTAAACACAAAGATGAAAAACAAAAAAGAAAAAATCAGCT
TTTTATCTAGCAATGCTATAACCACCATTTTTGAATTTGAGAAACTTCAA
TCTATGCCCATGTTAGCTGGAAATTCTTTTTTGAAAAAAACAATTCAGTC
GAAATATATTGGACACGAAAGGAGGCTTTTTGTTCAACACTTTGAAAGTA
TTTTCTGGGCAATACTAGAATCTGATTGGATGCAATAAAACAAGTTGCAA
CGAGAATTGTTTGCAATGAGGCATTTGTATAAGTGTGAAACACGTTGAAC
ATCACGTCTGACACTCTTGCTACGTCTTTATTAACATGGTACACTTTTAT
ATTTTTCTGGCGCATATCTTTACTTCAAAACATACTGTGGCCATTGTATG
TGATTAAATTGATCCCAAATACTTCCAAACCCCCTTTGTTTTTTGATCCC
CCAAACATTCCCATCCCCCCTGTTTTTCAGGAAATTGTAACCAAATGTCC
CCAAAAAAAATTGGCATCGCCATAATAAAAAGGAGGATTGAACTATTTTC
TGCATTTCGAAGCATATTTTAGGGTTGTCTGGGGCTGCGAAACCCTTAAG
AGCAGGTGGTCATAGCTTTAGGCTGCAATCTTTTCTAACTGGCTTTCTTT
GTATGTTATTTCATGCTTGAGCTAGAAACTTCACATTAGAGGAAGGGACC
CGAAAAACACTCTCCAAGTCTCCTTTAACAGTATTATATTGAATTCGAGG
CTAAACTATTTTATGGCTGAATATAATGAGGATTTAAAGATATACCAAAA
TTTTAAGAAAACGATTTTAGCCCTAGTTATAGAAAAAGACAGTTGAATAT
GTTATCTGTGTATGACTAAAACTAAATGTCTGTTTTTGGCTGTGAAAATC
ACACCCCTCATTTCTCCTTTCAAAGTTTATAGAAGTTTTTTTATACAGAG
GAAGTTTAAGAAAATCTATTTCCCTTTATCTTCTATGGTGTGGTTGTGCC
ATGCTTCCTTTTGAACTTTGGCCTTTCTTGTTTTGATAAACAACAACTTG
GCACTTCAAAAATCTCAATACCTAATATTGTTATCACAAGATATTCACAC
TCAGATCAACAACAGATATAACAGGACTTCATTTTTATTTGTCAGTTTAG
AATTCTGTCTCTATTATTGACACAGTGAAATTTTGAGCTTGCATTTGCAT
ATCGTCCTATCTGTTATAATTTTTCTAAATTTTAAGTACAAGATAGAGTT
GTATTATTGATTCAATGGCTCTTAGGTCACATATAATGATCAGTCCAGGT
TTTAAATTGGTCTCTCCCTTCTTTTCTATTTGATGGGTATTCTCGTTGTA
ACTTTTTGGATTTATTCTAGTTATTATTCAAAATTTGTTGGCAATGTAAT
GTAATAAAGTAATATTTTTTTGTAGAAACTTAAACAATCAAAATGGTCAA
GGTTGGTATCAATGGATTCGGACGTATTGGACGATTGGTGTGCCGTGCAG
CTTTTGAGCATGAAGAAATTGAAGTAGTCGCCATCAATGATCCTTTCATT
GATTTGGACTACATGGTCTACATGTTCACCTACGACTCAACCCATGGACG
CTTCAAAGGAACTGTCTCATCTACTGATGGAAAACTTATCATCAATGGAA
AACCAATCACAGTAAGATAGCTCCAATAGTATTTTGTATACGCTTTCAGC
TGTTTTGATTCGGAAAGTGAAATACTTTATTTGACGACTCCCTTTACACA
TGATGTCTAGCTAGGCTCTTTAGCTACACTCAATCATGAGAAATAATGTT
TGAATTCCTTCTAAATAAAAAGACTGCTTTTATTGGCTCTATAATAAATC
ATCTTTTTAAAAGTTTCTCGCAATTCGGTCAACTAATATCGAGGTTTATT
TTCATAATATTCTAGGTTTCTATGTGCCGTAACCCAGCTGAAATTCAATG
GGCTGCTGCTGGAGCTGAAATGGTTGTTGAATCATCTGGCGTTTTTACAA
CCAACGAGAAAGCCTCTGCTCACATGACTGGTGGTGCAAAGAAAGTCATC
ATCTCAGCTCCTTCAGCTGACGCACCGATGTTCGTCATGGGTGTCAACGA
AGATAAATATGACGCTGCTAAAATGCATGTTGTCAGGTAATGCCTTTTTG
AAACTTAAACGGTGATTTTGTTGAAATTTTTAGTTTTTGATTTCTAAATT
CAATTTTAGAATAAGTTGGCTAAATCACTTTTCGGTTCAAGCAGCTGATT
CAATTTAAGGGCTACATACACTACACAATATATTGTCAGGCAATACTTTG
ATGATATATTGCTGAATGTCGACAATATATTGAAAAGGTGTCCGCAATAT
ATTGTCAGCTCGATTTGCAATATTCCAACAATATAGGGGGATTGTTTACA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAGACCACAAATTCTATT
GAGCCAAAAGAATTACAGAGAAAAGCTTTATTTTTAAGATCCGGTAATTT
TTTAAAGTTCAAGAGTTAGGAGTGACAAACAGTGAAGGCAAGCAAGCAAA
TAACTAATAAGATGTATAACAAGGGTGAATTTTTCAATTTAATGTTTTTC
TGTCGACAGCAATGCTTCATGCACCACCAACTGTTTGGCACCCCTTGCCA
AGATCATTAACGACAACTTTGGAATCGAAGAAGGCTTGATGACTACTGTC
CATGCTACCACTGCTACACAAAAAACTGTCGATGGACCATCCATGAAAGT
AAGACTTTATTTTGAATAGGTATTTTGCTCTTTTAAAAGAGTACCACTGC
TGAAATGTTTCAAAGGATATCGAACCCTTGAAATACCTAAAGCAACGTCT
TTTAGAATTTAAAGGCTCAAATTCTAGAATCAGACTGGGAATGTCTGTTT
TCAATTTCTGCTTAAAATTCTTCTTAGAAATGGAGAGACGGTCGTGGTGC
CAGCCAAAACATCATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGCA
AAGTCATCCCTGAATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGTC
CCCACACCTGACGTCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAGG
TGCCAGTTACGATGAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGACC
CAACTCTTGGACGCTACATGGGATACACCGAAGACCAAGTTGTCTCAATG
GACTTCTTGGGTGACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTAT
TGCTTTGAGCCCACAATTCGTCAAACTCGTCTCATGGTACGTATTTACTC
TTTGATTAGAAGTAGAAGATTATTATTTTATCTCGCAACACATTTGCTTC
TGAATTAGCAAGTCTTAGTGTTCGAGTAAATCATATGTAAGCATCCAAAA
TCGATTTTTTTGAACAACAAAATAAGTGACTATACCTATTCTTTTTAGGA
TATGTTAGGATTTCCATTACGACATCTACTCCCTTATACACTTATGTAAC
TGATTTGGTGGATATTATAACCTCTGTCTTGAAATTGAGAACTTTTTTAT
CATCTTTAATTTTCTTCTCAGGTATGACAACGAGTACGGATACAGTCATC
GTGTCTGTGATTTGATCAAATATATGGCCACTAAACAATGAACTTCAAAA
TTGTAACAGCAACGTAGTCCATTACTCATTGTAGCAACGGCAAACAACGA
AGTCCGTTTGTTACCATTCTTCCCTGTTACTGTTCTTCTTATTCTTATCT
CTCTTCTCTAGAAAAACTGAAACATTATATTTATGAATGAATTGTAATGT
AGAAATTGCAATTGTAACTTAGATAATAATTGATATGCACTATTTTTACA
CCAATTACTTGTAGATTTAACACTATTTCTCGTCTTCCATACGGAAATGC
AATTAAAAATTGAATGATAAATGCAAATATGTTTTCTTTTCTTTTTTGGT
TCCCAACATTTTATACAGTGTAGGTTTTAACCCTATTCATACTAGGCTTT
TAGGGGTGGCTCAAAAGGGG

Coding sequence (CDS) from alignment at scaffold_466:181953..189522-

>TCONS_00067219 ID=TCONS_00067219|Name=TCONS_00067219|organism=Clytia hemisphaerica|type=CDS|length=5040bp|location=Sequence derived from alignment at scaffold_466:181953..189522- (Clytia hemisphaerica)
GTATGACAACGAGTACGGATACAGTCATCGTGTCTGTGATTTGATCAAAT
ATATGGCCACTAAACAATGAAAATGGAGAGACGGTCGTGGTGCCAGCCAA
AACATCATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGCAAAGTCAT
CCCTGAATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGTCCCCACAC
CTGACGTCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAGGTGCCAGT
TACGATGAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGACCCAACTCT
TGGACGCTACATGGGATACACCGAAGACCAAGTTGTCTCAATGGACTTCT
TGGGTGACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTATTGCTTTG
AGCCCACAATTCGTCAAACTCGTCTCATGCAATGCTTCATGCACCACCAA
CTGTTTGGCACCCCTTGCCAAGATCATTAACGACAACTTTGGAATCGAAG
AAGGCTTGATGACTACTGTCCATGCTACCACTGCTACACAAAAAACTGTC
GATGGACCATCCATGAAAGTTTCTATGTGCCGTAACCCAGCTGAAATTCA
ATGGGCTGCTGCTGGAGCTGAAATGGTTGTTGAATCATCTGGCGTTTTTA
CAACCAACGAGAAAGCCTCTGCTCACATGACTGGTGGTGCAAAGAAAGTC
ATCATCTCAGCTCCTTCAGCTGACGCACCGATGTTCGTCATGGGTGTCAA
CGAAGATAAATATGACGCTGCTAAAATGCATGTTGTCAGATGGTCAAGGT
TGGTATCAATGGATTCGGACGTATTGGACGATTGGTGTGCCGTGCAGCTT
TTGAGCATGAAGAAATTGAAGTAGTCGCCATCAATGATCCTTTCATTGAT
TTGGACTACATGGTCTACATGTTCACCTACGACTCAACCCATGGACGCTT
CAAAGGAACTGTCTCATCTACTGATGGAAAACTTATCATCAATGGAAAAC
CAATCACAGTATGACAACGAGTACGGATACAGTCATCGTGTCTGTGATTT
GATCAAATATATGGCCACTAAACAATGAAAATGGAGAGACGGTCGTGGTG
CCAGCCAAAACATCATTCCAGCCACTACTGGAGCTGCCAAAGCTGTCGGC
AAAGTCATCCCTGAATTGAACGGCAAACTCACCGGTATGGCTTTCCGTGT
CCCCACACCTGACGTCTCCGTTGTGGACTTGACTGTCCGTCTCAAAAAAG
GTGCCAGTTACGATGAAATCAAAGCCGTCATCAAGAAAGCTTCTGAAGAC
CCAACTCTTGGACGCTACATGGGATACACCGAAGACCAAGTTGTCTCAAT
GGACTTCTTGGGTGACACCCGATCCTCAATCTTTGACGCTCAAGCTGGTA
TTGCTTTGAGCCCACAATTCGTCAAACTCGTCTCATGCAATGCTTCATGC
ACCACCAACTGTTTGGCACCCCTTGCCAAGATCATTAACGACAACTTTGG
AATCGAAGAAGGCTTGATGACTACTGTCCATGCTACCACTGCTACACAAA
AAACTGTCGATGGACCATCCATGAAAGTTTCTATGTGCCGTAACCCAGCT
GAAATTCAATGGGCTGCTGCTGGAGCTGAAATGGTTGTTGAATCATCTGG
CGTTTTTACAACCAACGAGAAAGCCTCTGCTCACATGACTGGTGGTGCAA
AGAAAGTCATCATCTCAGCTCCTTCAGCTGACGCACCGATGTTCGTCATG
GGTGTCAACGAAGATAAATATGACGCTGCTAAAATGCATGTTGTCAGATG
GTCAAGGTTGGTATCAATGGATTCGGACGTATTGGACGATTGGTGTGCCG
TGCAGCTTTTGAGCATGAAGAAATTGAAGTAGTCGCCATCAATGATCCTT
TCATTGATTTGGACTACATGGTCTACATGTTCACCTACGACTCAACCCAT
GGACGCTTCAAAGGAACTGTCTCATCTACTGATGGAAAACTTATCATCAA
TGGAAAACCAATCACAGTATGACAACGAGTACGGATACAGTCATCGTGTC
TGTGATTTGATCAAATATATGGCCACTAAACAATGAAAATGGAGAGACGG
TCGTGGTGCCAGCCAAAACATCATTCCAGCCACTACTGGAGCTGCCAAAG
CTGTCGGCAAAGTCATCCCTGAATTGAACGGCAAACTCACCGGTATGGCT
TTCCGTGTCCCCACACCTGACGTCTCCGTTGTGGACTTGACTGTCCGTCT
CAAAAAAGGTGCCAGTTACGATGAAATCAAAGCCGTCATCAAGAAAGCTT
CTGAAGACCCAACTCTTGGACGCTACATGGGATACACCGAAGACCAAGTT
GTCTCAATGGACTTCTTGGGTGACACCCGATCCTCAATCTTTGACGCTCA
AGCTGGTATTGCTTTGAGCCCACAATTCGTCAAACTCGTCTCATGCAATG
CTTCATGCACCACCAACTGTTTGGCACCCCTTGCCAAGATCATTAACGAC
AACTTTGGAATCGAAGAAGGCTTGATGACTACTGTCCATGCTACCACTGC
TACACAAAAAACTGTCGATGGACCATCCATGAAAGTTTCTATGTGCCGTA
ACCCAGCTGAAATTCAATGGGCTGCTGCTGGAGCTGAAATGGTTGTTGAA
TCATCTGGCGTTTTTACAACCAACGAGAAAGCCTCTGCTCACATGACTGG
TGGTGCAAAGAAAGTCATCATCTCAGCTCCTTCAGCTGACGCACCGATGT
TCGTCATGGGTGTCAACGAAGATAAATATGACGCTGCTAAAATGCATGTT
GTCAGATGGTCAAGGTTGGTATCAATGGATTCGGACGTATTGGACGATTG
GTGTGCCGTGCAGCTTTTGAGCATGAAGAAATTGAAGTAGTCGCCATCAA
TGATCCTTTCATTGATTTGGACTACATGGTCTACATGTTCACCTACGACT
CAACCCATGGACGCTTCAAAGGAACTGTCTCATCTACTGATGGAAAACTT
ATCATCAATGGAAAACCAATCACAGTATGACAACGAGTACGGATACAGTC
ATCGTGTCTGTGATTTGATCAAATATATGGCCACTAAACAATGAAAATGG
AGAGACGGTCGTGGTGCCAGCCAAAACATCATTCCAGCCACTACTGGAGC
TGCCAAAGCTGTCGGCAAAGTCATCCCTGAATTGAACGGCAAACTCACCG
GTATGGCTTTCCGTGTCCCCACACCTGACGTCTCCGTTGTGGACTTGACT
GTCCGTCTCAAAAAAGGTGCCAGTTACGATGAAATCAAAGCCGTCATCAA
GAAAGCTTCTGAAGACCCAACTCTTGGACGCTACATGGGATACACCGAAG
ACCAAGTTGTCTCAATGGACTTCTTGGGTGACACCCGATCCTCAATCTTT
GACGCTCAAGCTGGTATTGCTTTGAGCCCACAATTCGTCAAACTCGTCTC
ATGCAATGCTTCATGCACCACCAACTGTTTGGCACCCCTTGCCAAGATCA
TTAACGACAACTTTGGAATCGAAGAAGGCTTGATGACTACTGTCCATGCT
ACCACTGCTACACAAAAAACTGTCGATGGACCATCCATGAAAGTTTCTAT
GTGCCGTAACCCAGCTGAAATTCAATGGGCTGCTGCTGGAGCTGAAATGG
TTGTTGAATCATCTGGCGTTTTTACAACCAACGAGAAAGCCTCTGCTCAC
ATGACTGGTGGTGCAAAGAAAGTCATCATCTCAGCTCCTTCAGCTGACGC
ACCGATGTTCGTCATGGGTGTCAACGAAGATAAATATGACGCTGCTAAAA
TGCATGTTGTCAGATGGTCAAGGTTGGTATCAATGGATTCGGACGTATTG
GACGATTGGTGTGCCGTGCAGCTTTTGAGCATGAAGAAATTGAAGTAGTC
GCCATCAATGATCCTTTCATTGATTTGGACTACATGGTCTACATGTTCAC
CTACGACTCAACCCATGGACGCTTCAAAGGAACTGTCTCATCTACTGATG
GAAAACTTATCATCAATGGAAAACCAATCACAGTATGACAACGAGTACGG
ATACAGTCATCGTGTCTGTGATTTGATCAAATATATGGCCACTAAACAAT
GAAAATGGAGAGACGGTCGTGGTGCCAGCCAAAACATCATTCCAGCCACT
ACTGGAGCTGCCAAAGCTGTCGGCAAAGTCATCCCTGAATTGAACGGCAA
ACTCACCGGTATGGCTTTCCGTGTCCCCACACCTGACGTCTCCGTTGTGG
ACTTGACTGTCCGTCTCAAAAAAGGTGCCAGTTACGATGAAATCAAAGCC
GTCATCAAGAAAGCTTCTGAAGACCCAACTCTTGGACGCTACATGGGATA
CACCGAAGACCAAGTTGTCTCAATGGACTTCTTGGGTGACACCCGATCCT
CAATCTTTGACGCTCAAGCTGGTATTGCTTTGAGCCCACAATTCGTCAAA
CTCGTCTCATGCAATGCTTCATGCACCACCAACTGTTTGGCACCCCTTGC
CAAGATCATTAACGACAACTTTGGAATCGAAGAAGGCTTGATGACTACTG
TCCATGCTACCACTGCTACACAAAAAACTGTCGATGGACCATCCATGAAA
GTTTCTATGTGCCGTAACCCAGCTGAAATTCAATGGGCTGCTGCTGGAGC
TGAAATGGTTGTTGAATCATCTGGCGTTTTTACAACCAACGAGAAAGCCT
CTGCTCACATGACTGGTGGTGCAAAGAAAGTCATCATCTCAGCTCCTTCA
GCTGACGCACCGATGTTCGTCATGGGTGTCAACGAAGATAAATATGACGC
TGCTAAAATGCATGTTGTCAGATGGTCAAGGTTGGTATCAATGGATTCGG
ACGTATTGGACGATTGGTGTGCCGTGCAGCTTTTGAGCATGAAGAAATTG
AAGTAGTCGCCATCAATGATCCTTTCATTGATTTGGACTACATGGTCTAC
ATGTTCACCTACGACTCAACCCATGGACGCTTCAAAGGAACTGTCTCATC
TACTGATGGAAAACTTATCATCAATGGAAAACCAATCACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041993XLOC_041993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067219-exon-scaffold_466-1575043694:189205..189522TCONS_00067219-exon-scaffold_466-1575043694:189205..189522Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1575043694:184512..184747TCONS_00067219-exon-scaffold_466-1575043694:184512..184747Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1575043694:184037..184257TCONS_00067219-exon-scaffold_466-1575043694:184037..184257Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1575043694:183225..183363TCONS_00067219-exon-scaffold_466-1575043694:183225..183363Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1575043694:182687..183045TCONS_00067219-exon-scaffold_466-1575043694:182687..183045Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1575043694:181953..182401TCONS_00067219-exon-scaffold_466-1575043694:181953..182401Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:189205..189522TCONS_00067219-exon-scaffold_466-1510915933:189205..189522Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:184512..184747TCONS_00067219-exon-scaffold_466-1510915933:184512..184747Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:184037..184257TCONS_00067219-exon-scaffold_466-1510915933:184037..184257Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:183225..183363TCONS_00067219-exon-scaffold_466-1510915933:183225..183363Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:182687..183045TCONS_00067219-exon-scaffold_466-1510915933:182687..183045Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1510915933:181953..182401TCONS_00067219-exon-scaffold_466-1510915933:181953..182401Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:189205..189522TCONS_00067219-exon-scaffold_466-1491911889:189205..189522Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:184512..184747TCONS_00067219-exon-scaffold_466-1491911889:184512..184747Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:184037..184257TCONS_00067219-exon-scaffold_466-1491911889:184037..184257Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:183225..183363TCONS_00067219-exon-scaffold_466-1491911889:183225..183363Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:182687..183045TCONS_00067219-exon-scaffold_466-1491911889:182687..183045Clytia hemisphaericaexon
TCONS_00067219-exon-scaffold_466-1491911889:181953..182401TCONS_00067219-exon-scaffold_466-1491911889:181953..182401Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067219-proteinTCONS_00067219-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:181953..189522 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1754.8	1755.84	1718.56	1641.94	128.985	101.376	352.387	386.883	769.877	761.68	902.964	959.143	751.317	732.182	1035.19	1148.07	904.484	980.003	302.432	318.322	652.28	691.201	1004.15	977.158	661.366	591.242	610.998	529.64	581.814	549.051
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020831GlycerAld/Erythrose_P_DH
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR006424Glyceraldehyde-3-P_DH_1
IPR020829GlycerAld_3-P_DH_cat
IPR020830GlycerAld_3-P_DH_AS
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006006glucose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0050661NADP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006006 glucose metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051287 NAD binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Blast
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BLAST of TCONS_00067219 vs. Swiss-Prot (Human)
Match: G3P (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 481.871 bits (1239), Expect = 9.898e-167
Identity = 246/334 (73.65%), Postives = 286/334 (85.63%), Query Frame = 3 
Query:  339 VKVGINGFGRIGRLVCRAAFEHEEIEVVAINDPFIDLDYMVYMFTYDSTHGRFKGTVSSTDGKLIINGKPITVSMCRNPAEIQWAAAGAEMVVESSGVFTTNEKASAHMTGGAKKVIISAPSADAPMFVMGVNEDKYDAAKMHVVSNASCTTNCLAPLAKIINDNFGIEEGLMXXXXXXXXXXXXXDGPSMKKWRDGRGASQNIIPATTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLKKGASYDEIKAVIKKASEDPTLGRYMGYTEDQVVSMDFLGDTRSSIFDAQAGIALSPQFVKLVSWYDNEYGYSHRVCDLIKYMATKQ 1340
            VKVG+NGFGRIGRLV RAAF   ++++VAINDPFIDL+YMVYMF YDSTHG+F GTV + +GKL+ING PIT+   R+P++I+W  AGAE VVES+GVFTT EKA AH+ GGAK+VIISAPSADAPMFVMGVN +KYD + + ++SNASCTTNCLAPLAK+I+DNFGI EGLMTTVHA TATQKTVDGPS K WRDGRGA QNIIPA+TGAAKAVGKVIPELNGKLTGMAFRVPT +VSVVDLT RL+K A YD+IK V+K+ASE P  G  +GYTE QVVS DF  DT SS FDA AGIAL+  FVKL+SWYDNE+GYS+RV DL+ +MA+K+
Sbjct:    4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNS-LKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKG-ILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
The following BLAST results are available for this feature:
BLAST of TCONS_00067219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G3P9.898e-16773.65Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
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