Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066704-protein ID=TCONS_00066704-protein|Name=TCONS_00066704-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
EENKNNFKIATLLKNEMSEKNDGKSERGLLARTATYTSKKARRAQTKLKQ
RVGKGDETKDEVFDEFVFNFNKQQASATRLHAELKNYMRCITAMQVAHTN
FGEAVKEVYESDWSCRPKMVDYFKEYDSNWTKLRHRVSEEVLEPLTSYLK
PFPDVKTKISKRARKLVDYDHSRHAVD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005737 |
cytoplasm |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR003005 | Amphiphysin | PRINTS | PR01251 | AMPHIPHYSIN | coord: 107..119
score: 52.75
coord: 47..64
score: 61.11
coord: 142..156
score: 47.94
coord: 75..85
score: 39.39
coord: 164..175
score: 75.0 |
| IPR004148 | BAR domain | PFAM | PF03114 | BAR | coord: 39..176
e-value: 1.4E-24
score: 86.9 |
| IPR004148 | BAR domain | PROSITE | PS51021 | BAR | coord: 48..177
score: 19.822 |
| None | No IPR available | GENE3D | 1.20.1270.60 | | coord: 44..177
e-value: 2.9E-26
score: 92.0 |
| IPR027267 | Arfaptin homology (AH) domain/BAR domain | SUPERFAMILY | 103657 | BAR/IMD domain-like | coord: 50..176 |
Blast
BLAST of TCONS_00066704-protein vs. Swiss-Prot (Human)
Match: AMPH (Amphiphysin OS=Homo sapiens GN=AMPH PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.899e-33 Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0 Query: 28 GLLARTATYTSKKARRAQTKLKQRVGKGDETKDEVFDEFVFNFNKQQASATRLHAELKNYMRCITAMQVAHTNFGEAVKEVYESDWSCRPKMVDYFKEYDSNWTKLRHRVSEEVLEPLTSYLKPFPDVKTKISKRARKLVDYDHSRH 174
G+ A+ K+ RAQ K+ Q++GK DETKDE F+E+V NF +Q+A TRL EL+ Y+ I MQ A E++ EVYE DW R + ++ D W ++ + L L +YL FPD+K +I+KR+RKLVDYD +RH
Sbjct: 7 GIFAKN---VQKRLNRAQEKVLQKLGKADETKDEQFEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYGREDVKMVGEKCDVLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARH 150
The following BLAST results are available for this feature:
BLAST of TCONS_00066704-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| AMPH | 3.899e-33 | 42.86 | Amphiphysin OS=Homo sapiens GN=AMPH PE=1 SV=1 | [more] |
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