TCONS_00066066-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066066-protein
Unique NameTCONS_00066066-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066066-protein ID=TCONS_00066066-protein|Name=TCONS_00066066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MVSRSILSRILISSYQRCLSKRIILQSQRGMAGMIDAGEGLDEDRQSIQE
LALSFAAKEMAPNMLKWDEQEHFPLDTLKSAAELGFGGIRVSEEYGGSNL
SCLDASIIYEALSTGCTSTTAFLTIHNMVQGLIETYGSKEIKDNFLPQLV
TCQKIASYCLTEPNSGSDAASLGTVAKLDGNEYVLSGSKMFISGGGESDL
YAVMARTGGKGPKGISCILVEKGTPGLEFGKKERKVGWNSQPTRAVMFDQ
CRVPVENRIGHEGEGFNIAMNALNGGRISISSCSLGAAHQSIQLSIDYAK
ERKQFGNSLADFQNTQFKLAEMATDLVASRLMVRTAAEAIDSKSKNAATL
AAMAKLQATDKCFNICNSALQLHGGYGYLKDYAVQQFMRDTRVHQILEGT
NEVMRMIIARHLLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041368XLOC_041368Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066066TCONS_00066066Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR013786AcylCoA_DH/ox_N
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR006089Acyl-CoA_DH_CS
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003995 acyl-CoA dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 263..413
e-value: 3.0E-48
score: 163.7
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 262..414
NoneNo IPR availableGENE3D1.20.140.10coord: 253..414
e-value: 1.9E-56
score: 190.0
NoneNo IPR availableGENE3D2.40.110.10coord: 156..252
e-value: 7.8E-35
score: 118.7
NoneNo IPR availablePIRSFPIRSF016578PIGMcoord: 246..414
e-value: 6.1E-13
score: 46.0
coord: 36..226
e-value: 1.7E-6
score: 24.7
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 20..155
e-value: 8.7E-26
score: 90.2
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalPFAMPF02771Acyl-CoA_dh_Ncoord: 43..151
e-value: 3.0E-24
score: 85.7
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 157..251
e-value: 3.0E-25
score: 88.2
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00072ACYL_COA_DH_1coord: 159..171
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 39..276

Blast
[Close]
BLAST of TCONS_00066066-protein vs. Swiss-Prot (Human)
Match: ACAD8 (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1)

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 247/393 (62.85%), Postives = 313/393 (79.64%), Query Frame = 0 
Query:   22 RIILQS-QRGMAGMIDAGEGLDEDRQSIQELALSFAAKEMAPNMLKWDEQEHFPLDTLKSAAELGFGGIRVSEEYGGSNLSCLDASIIYEALSTGCTSTTAFLTIHNMVQGLIETYGSKEIKDNFLPQLVTCQKIASYCLTEPNSGSDAASLGTVAKLDGNEYVLSGSKMFISGGGESDLYAVMARTGGKGPKGISCILVEKGTPGLEFGKKERKVGWNSQPTRAVMFDQCRVPVENRIGHEGEGFNIAMNALNGGRISISSCSLGAAHQSIQLSIDYAKERKQFGNSLADFQNTQFKLAEMATDLVASRLMVRTAAEAIDSKSKNAATLAAMAKLQATDKCFNICNSALQLHGGYGYLKDYAVQQFMRDTRVHQILEGTNEVMRMIIARHLL 413
            R+++Q+  R +   ID   GL+E+++  Q++A  FAA+EMAPNM +WD++E FP+D ++ AA+LGFGG+ +  + GGS LS LD S+I+EAL+TGCTSTTA+++IHNM   +I+++G++E +  F P L T +K ASYCLTEP SGSDAASL T AK  G+ Y+L+GSK FISG GESD+Y VM RTGG GPKGISCI+VEKGTPGL FGKKE+KVGWNSQPTRAV+F+ C VPV NRIG EG+GF IA+  LNGGRI+I+SCSLGAAH S+ L+ D+   RKQFG  LA  Q  QF LA+MAT LVA+RLMVR AA A+  + K+A  L +MAKL ATD+CF ICN ALQ+HGGYGYLKDYAVQQ++RD+RVHQILEG+NEVMR++I+R LL
Sbjct:   21 RVLVQTGHRSLTSCIDPSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLL 413
The following BLAST results are available for this feature:
BLAST of TCONS_00066066-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACAD80.000e+062.85Isobutyryl-CoA dehydrogenase, mitochondrial OS=Hom... [more]
back to top