thymocyte nuclear protein (polypeptide) - C. hemisphaerica

Overview
Namethymocyte nuclear protein
Unique NameTCONS_00065430-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065430-protein ID=TCONS_00065430-protein|Name=thymocyte nuclear protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MLWLLLERNEGLLITLSRMKTWIKFQKTVRRSWFINMKSMTFVYQEPAAE
NNEQKFWLMKSEPETRIEKGVDVKFGIEDLKKEPKQTACWDGVRNYQARN
FMRDQMKVGNKAFFYHSNCKVPGIAGIMTIVKESYPDHTQFDSKDVHFDP
KSQKENPKWFMVDVKYERMMKRYIGLPELKKLHSEHKSSHGPLKSVALFT
RARLSVQPLTKEEYDYILTLEEVEEP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041005XLOC_041005Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065430TCONS_00065430Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002740EVE_domain
IPR015947PUA-like_domain
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002740EVE domainPFAMPF01878EVEcoord: 55..219
e-value: 3.5E-48
score: 163.2
NoneNo IPR availableGENE3D3.10.590.10coord: 53..226
e-value: 1.2E-61
score: 206.9
IPR015947PUA-like domainSUPERFAMILY88697PUA domain-likecoord: 52..222

Blast
[Close]
BLAST of thymocyte nuclear protein vs. Swiss-Prot (Human)
Match: THYN1 (Thymocyte nuclear protein 1 OS=Homo sapiens GN=THYN1 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.534e-89
Identity = 118/173 (68.21%), Postives = 145/173 (83.82%), Query Frame = 0 
Query:   52 NEQKFWLMKSEPETRIEKGVDVKFGIEDLKKEPKQTACWDGVRNYQARNFMRDQMKVGNKAFFYHSNCKVPGIAGIMTIVKESYPDHTQFDSKDVHFDPKSQKENPKWFMVDVKYERMMKRYIGLPELKKLHSEHKSSHGPLKSVALFTRARLSVQPLTKEEYDYILTLEEVE 224
            N    WLMKSEPE+R+EKGVDVKF IEDLK +PKQT CWDGVRNYQARNF+R  MK+G +AFFYHSNCK PGIAG+M IVKE+YPDHTQF+  + H+DP S+++NPKW MVDV++ RMMKR+I L ELK  H  HK++ GPLK++ LFTR RLS+QPLT+EE+D++L+LEE E
Sbjct:   52 NLSSHWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLR-AMKLGEEAFFYHSNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPLAELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSLEEKE 223
The following BLAST results are available for this feature:
BLAST of thymocyte nuclear protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THYN11.534e-8968.21Thymocyte nuclear protein 1 OS=Homo sapiens GN=THY... [more]
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