TCONS_00065198-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065198-protein
Unique NameTCONS_00065198-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length388

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065198-protein ID=TCONS_00065198-protein|Name=TCONS_00065198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
MDKKLFTSLRAFWKNYLFNSMFTVFIVFLLSPQYEATSSLQQAKYASCLN
DNFYLRKFDKVGITIHYHKTEIVNDPVTDWKKCFQRCRLLNCVIFTVWKI
TLDNTFTCRYFFTLRNRFHPCARISTQPNFQMTFVRTECNPSTDPKTQFV
PVVYDEASTCNDILQTGQTKSGIYQVGIFDKLYDSESYQYVLCEMNEEEF
GAGWTVIQRNYEAEDRENFWGSYQRYKHGFGHLQSSFWIGLETMYQMTKH
KDQELLIVLQVGSTIKRAVFDTFYVGNETEGYKLNIGGYSQTDSTMADSN
TTDTVFAEFHNGFPFTVPEVGGTNCATASKAGWWFNPNPSDCFRVFLNGQ
PDLNMCSQATNAHKSLIWNWASTTCFEQSTMMIRKRKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040875XLOC_040875Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065198TCONS_00065198Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 155..386
e-value: 7.5E-15
score: 61.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 159..384
e-value: 2.9E-32
score: 112.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 151..387
score: 24.291
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 156..384
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 152..290
e-value: 5.5E-31
score: 107.0
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 291..378
e-value: 1.7E-5
score: 24.4

Blast
[Close]
BLAST of TCONS_00065198-protein vs. Swiss-Prot (Human)
Match: ANGL6 (Angiopoietin-related protein 6 OS=Homo sapiens GN=ANGPTL6 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.849e-23
Identity = 69/235 (29.36%), Postives = 106/235 (45.11%), Query Frame = 0 
Query:  124 ISTQPNFQMTFVRTECNPSTDPKTQFVPVVYDEA----STCNDILQTGQTKSGIYQVGIFDKLYDSESYQYVLCEMNEEEFGAGWTVIQRNYEAEDRENFWGSYQRYKHGFGHLQSSFWIGLETMYQMTKHKDQELLIVLQV-GSTIKRAVFDTFYVGNETEGYKLNIGGYSQTDSTMADSNTTDTVFAEFHNGFPFTVPEVG----GTNCATASKAGWWFNPNPSDCFRVFLNG 349
            +   P  Q    + +  P   P     P V  +       C +  Q G  +SG+Y++ +   +        V CE   E  G GWTVIQR  +     NF+ ++Q YK GFG     +W+GLE +YQ+T   D ELL++L+  G    RA +D F +  E++ Y+L +G Y          +  D++   +HN  PF+  +        NCA   + GWW++     C    LNG
Sbjct:  220 LDPAPEPQRDQTQRQQEPMASPMPAGHPAVPTKPVGPWQDCAEARQAGHEQSGVYELRVGRHVVS------VWCEQQLE--GGGWTVIQRRQDGS--VNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQYH--------GDAGDSL--SWHNDKPFSTVDRDRDSYSGNCALYQRGGWWYH----ACAHSNLNG 430
The following BLAST results are available for this feature:
BLAST of TCONS_00065198-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL64.849e-2329.36Angiopoietin-related protein 6 OS=Homo sapiens GN=... [more]
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