TCONS_00065198 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065198
Unique NameTCONS_00065198
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1562

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065198 ID=TCONS_00065198|Name=TCONS_00065198|organism=Clytia hemisphaerica|type=transcript|length=1562bp
ttttcttcatataaCTAGACTTTAGGAAAGATGTTTGTTTAAAAGTTGTT
AGTTGAAATTGGTGGAGGATCTCAATTCAAAAAGCCCTTGAATCTTTTAC
TGGAGCTTTTTTTTAGATTTACGATATACAATCGAACGATAAAATGTGAT
TAGttgattatatatttttggcATCATATCaacaaaatggacaaaaaact
GTTTACGTCTCTACGAGCTTTCTGGAAGAATTATCTCTTTAATAGTATGT
TTACTGTATTCATAGTATTTCTATTATCTCCACAATATGAGGCAACATCT
TCACTTCAGCAAGCCAAATACGCGTCATGCTTAAATGATAATTTCTATCT
CCGAAAGTTCGATAAAGTTGGCATTACAATTCACTATCATAAAACTGAGA
TAGTTAATGACCCTGTGACAGAttggaaaaagtgttttcaaCGATGCCGA
CTATTGAATTGTGTTATTTTCACCGTTTGGAAGATTACTTTGGACAATAC
TTTCACATGTCGATACTTTTTTACTTTACGCAATAgatttcatcCTTGCG
CACGTATTTCCACACAACCAAACTTCCAAATGACCTTTGTTCGAACAGAG
TGTAACCCTTCTACGGATCCGAAAACACAATTTGTTCCTGTGGTATACGA
TGAAGCATCGACCTGCAACGATATACTTCAGACTGGTCAAACTAAATCAG
GAATCTACCAAGTTGGCATATTTGATAAGTTGTACGACAGTGAAAGTTAT
CAATATGTGTTGTGTGAGATGAATGAAGAAGAATTCGGTGCCGGTTGGAC
AGTCATTCAAAGAAATTATGAAGCTGAAGATCGGGAGAATTTTTGGGGAA
GTTATCAAAGGTACAAGCATGGCTTTGGGCATTTGCAATCATCCTTTTGG
ATTGGTCTGGAAACAATGTATCAAATGACCAAACACAAAGACCAAGAACT
CCTTATTGTGCTTCAAGTAGGATCAACAATTAAACGAGCAGTCTTCGATA
CCTTCTACGTTGGTAATGAAACCGAAGGCTACAAGTTGAACATTGGTGGC
TATTCACAAACAGACTCAACAATGGCTGACAGTAATACAACAGACACTGT
ATTTGCTGAATTTCATAATGGCTTCCCTTTCACAGTTCCAGAGGTTGGTG
GTACTAATTGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAATCCTAAC
CCCAGTGATTGTTTCAGAGTATTCCTGAATGGACAACCAGATCTCAATAT
GTGCAGTCAAGCAACAAATGCTCATAAAAGTTTGATATGGAATTGGGCAT
CGACTACTTGCTTTGAACAATCAACAATGATgatcagaaaaagaaaatat
tgaacttTATATTCAGTCAGGAAGGAAAGACactttttttattctgctac
tggcagtttcagGCTATTCTTCCTGACTGGCATAGCTCTACCTATGTATC
GAGCGCTgtaaaaaaaactgaagaaatcCTCACATTGCACtttatacata
tttttaaagTAGTAGTACCCAGGCTGCTAAGGTTCGAGGTCTCAAATTAG
GCGATTTTTTAA
Run BLAST on NCBI

protein sequence of TCONS_00065198-protein

>TCONS_00065198-protein ID=TCONS_00065198-protein|Name=TCONS_00065198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
MDKKLFTSLRAFWKNYLFNSMFTVFIVFLLSPQYEATSSLQQAKYASCLN
DNFYLRKFDKVGITIHYHKTEIVNDPVTDWKKCFQRCRLLNCVIFTVWKI
TLDNTFTCRYFFTLRNRFHPCARISTQPNFQMTFVRTECNPSTDPKTQFV
PVVYDEASTCNDILQTGQTKSGIYQVGIFDKLYDSESYQYVLCEMNEEEF
GAGWTVIQRNYEAEDRENFWGSYQRYKHGFGHLQSSFWIGLETMYQMTKH
KDQELLIVLQVGSTIKRAVFDTFYVGNETEGYKLNIGGYSQTDSTMADSN
TTDTVFAEFHNGFPFTVPEVGGTNCATASKAGWWFNPNPSDCFRVFLNGQ
PDLNMCSQATNAHKSLIWNWASTTCFEQSTMMIRKRKY
Run BLAST on NCBI

transcript from alignment at scaffold_433:184873..189082-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065198 ID=TCONS_00065198|Name=TCONS_00065198|organism=Clytia hemisphaerica|type=transcript|length=4210bp|location=Sequence derived from alignment at scaffold_433:184873..189082- (Clytia hemisphaerica)
TTTTCTTCATATAACTAGACTTTAGGAAAGATGTTTGTTTAAAAGTTGTT
AGTTGAAATTGGTGGAGGATCTCAATTCAAAAAGCCCTTGAATCTTTTAC
TGGAGCTTTTTTTTAGATTTACGATATACAATCGAACGATAAAATGTGAT
TAGTTGATTATATATTTTTGGCATCATATCAACAAAATGGACAAAAAACT
GTTTACGTCTCTACGAGCTTTCTGGAAGAATTATCTCTTTAATAGTATGT
TTACTGTATTCATAGTATTTCTATTATCTCCACAATATGAGGCAACATCT
TCACTTCAGCAAGCCAAATACGCGTCATGCTTAAATGATAATTTCTATCT
CCGAAAGTTCGATAAAGTTGGCATTACAATTCACTATCATAAAACTGAGA
TAGTTAATGACCCTGTGACAGATTGGAAAAAGTGTTTTCAACGATGCCGA
CTATTGAATTGTGTTATTTTCACCGTTTGGAAGATTACTTTGGACAATAC
TTTCACATGTCGATACTTTTTTACTTTACGCAATAGGTAAATTTTTCTTC
TTTTTATTTCAACCAGTAAATTCTAGCTAAGGCTTGTTTCACCCTTCATG
TTCAAAATTTTGCCTGGAAAACACGGTTCTTGTCATTTTTGCACCCTTGG
TGTAAAGGCTTGGGGACATGTGTCTCATGGTTTCTTTTGTTTGTTTCATG
GGACAAAAAGTGAGGGAAATACCCAAAAGACACGCTGATTTTGTCCATTG
TCATGTCCCCAAGCCTTAAAACTAAGAGTAGGTAAAAATTTTAGCCTATA
ATGAACCATTGAAGGACATTGAAGTCTTTAGAGTTTTTGGTAAAAATTTC
TTCTCCGTTTGGAAAATACCCTGGAATTTCAGCCCCACTGGGAAATTGAC
TTTAATTTCATCCCCACTCGAAATTCAACGTTTAAAAGCTGTTCTTCAAA
ACCATTGCCACTTAATTTTTTATCCTTGGAGCAATAGACTTTTTATCCCC
ATTGGGATTTCAATAGGAAAAAGATCCCCTGGGGCTGTGGTACAGGGGTG
TTAAAATGTATCTTTTTTTAGATTTCATCCTTGCGCACGTATTTCCACAC
AACCAAACTTCCAAATGACCTTTGTTCGAACAGAGTGTAACCCTTCTACG
GATCCGAAAACACAATTTGTTCCTGTGGTATACGATGAAGCATCGACCTG
CAACGATATACTTCAGACTGGTCAAACTAAATCAGGTTCTTTTGATTGTT
TTATTGTTCACCCATTTTTGAATCTCAAAAAATAGAAACCAAGATTTGCT
AGTTGGTGAATTTTAGGGCTGTTCCATTAAAAAACCATACAAGTGGACGA
ACCTTTTCAAGTCAAAAAAATTCATAAAAATGTTTCGATACCACCTGGAA
GATAGCCAAATATACCTTAAAGTGAAGGTGGACGAACTGAAATCAGTTTT
CCACCCCCTGGAAAAAATTAAAAAACACTCATTTAGACCCCTTGGAAGTT
CTGCTCACATTCATTATCTCGGTCTCTCCACTGGTCAATTTCGCCAAAAT
TACGTCCCCGTTGGCAAAAACAATGGCAAAAATACCCTATCTTTTCAGCC
CCATTGGCAAATTGACTTTGATTCTATGTATGAACCTTTAACTTTATTTA
CACACCCAGGAATCTACCAAGTTGGCATATTTGATAAGTTGTACGACAGT
GAAAGTTATCAATATGTGTTGTGTGAGATGAATGAAGAAGAATTCGGTGC
CGGTTGGACAGTCATTCAAAGAAATTATGAAGCTGAAGATCGGGAGAATT
TTTGGGGAAGTTATCAAAGGTAGCAACACTTTTATTCATTATCTCTATAC
CTCATATATTCAAACAACAATTGACTTATTCTTGTACCCAGGACCATAAG
CTTCTTTGCAATATAGATGGTGCTTAACAGTCCATACCCAAGGTCATAAT
CTATATTATGCGATAAAGATAATGCTTAAGGGTCTGCTTATTTCCTTTCC
TCGTTTTTAAGGTGAAATCAACAAAGGAGTGCCAAAATTAGCAATCATAG
GCGCTTTTCGCTTCTCTTTTTCTCTCAGTGCCCCTTAAAATTCGGCCGCT
GTAGGGGGGTGGGCAGTCCCCCCTTTAATCCCCTGTCACCACAATACTGT
TACCTACGGTAAATCCTAATAAGGTGCAAACCTTACTTTTTCTATGAAAC
CTTTCATCATTGAATATCTATATTAATCTTCGATATGAAATCATCATCTT
CTGTGACTTCATCAGCCAAGAGCTTATAACTAGCAGTCGCTTCATTTTTT
CTCTATGTTCTATGTTAATCCTCTCTTAAGGTACAAGCATGGCTTTGGGC
ATTTGCAATCATCCTTTTGGATTGGTCTGGAAACAATGTATCAAATGACC
AAACACAAAGACCAAGAACTCCTTATTGTGCTTCAAGTAGGATCAACAAT
TAAACGAGCAGTCTTCGATACCTTCTACGTTGGTAATGAAACCGAAGGCT
ACAAGTAAGTTCAAAAGGACCGTTTTGATGTTTTTTTTCGATTGTGAATC
TAAATATTAAGCTTAAAACCCAGAACAAATTCTGAATCCCAATCTAAATC
GCAAAACACTCACAGTATCTAAAAAATCACTCAGGAAAAATACCCTGAAA
TTTCACACAATTTGAATTAGAAATGTTCCTCGTTGCTGGTAGAAACGCCG
AAATATTGGTCATCCAAAGTTCATTAACTTGTAAACCTAATTTCTCAAAG
AAAACCAATCCCTCTTTTATTTTTTCCTTCTGGCTACACATTCATGTTTA
TTCATTTATATCCATATAATCAAACCTATGGTTAAGGACTCAAAGAACTG
TTCGCCGACATAATACACTTTTTTCTCAATTCTCTAGGTTGAACATTGGT
GGCTATTCACAAACAGACTCAACAATGGCTGACAGTAATACAACAGACAC
TGTATTTGCTGAATTTCATAATGGCTTCCCTTTCACAGTTCCAGAGGCAA
GTACCTCAAACAAAAAGTGCTCATAATCTCCTTATACATGTACCCACGGG
GGAGGGGGGTACTAGGGTTGCGGGCTGACGGGGGGGGTTGCCACCCGACT
TTCAACCCTCGGACCCTTACCGGGACTAAAAATGAGAAAACAAAGAAAAA
TTTTGTGAATTTTACGACCTTTACGGGACAATTTTGACCAAATTTCGATT
TTTCTGGGGGTAAAAATAGTTGAAATTTTCCTATTTCTCCTACCCTTAGT
GGGACTGAAATTTGATTTTCTGATTTTTCCAACCCTTATTAGCGAAACTT
TGGAAATCCAAAAAAGGTACCCTTAAGGACGGCACATACCGTACCCTCCA
TTTTCCTAAGTACCCTCCTCCCCCCCCCCCCCGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCCCCCCCCCCCCCCGGGTACGTGTATTAGAGGGAAAGAAATATGTT
TTCGTAAATGTTTTTATGATTATCAATATAGAAGAACTTGAAAAATAACT
GGAGGATCCCTTTTGAGTTTATCTGAGATCATCAGGGAAAAAGCGCGTTA
AGTAGAGAGAAGACGGCTTCGTTAGTTTTTTTGTTGAAATATCGCCTGAA
AATTCATAGCCCATGGTCCACTTAGGACTTTTTGATAGACTGGTTGGCGT
GATTAAGTGGAAGTCTATGGTAGTTTCAAATTTTGAGTTTTTGTTTAGGT
GGACTGTAAAACAACATGCTTAATTTCCTTTATCTATTCAGGTTGGTGGT
ACTAATTGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAATCCTAACCC
CAGTGATTGTTTCAGAGTATTCCTGAATGGACAACCAGATCTCAATATGT
GCAGTCAAGCAACAAATGCTCATAAAAGTTTGATATGGAATTGGGCATCG
ACTACTTGCTTTGAACAATCAACAATGATGATCAGAAAAAGAAAATATTG
AACTTTATATTCAGTCAGGAAGGAAAGACACTTTTTTTATTCTGCTACTG
GCAGTTTCAGGCTATTCTTCCTGACTGGCATAGCTCTACCTATGTATCGA
GCGCTGTAAAAAAAACTGAAGAAATCCTCACATTGCACTTTATACATATT
TTTAAAGTAGTAGTACCCAGGCTGCTAAGGTTCGAGGTCTCAAATTAGGC
GATTTTTTAA

Coding sequence (CDS) from alignment at scaffold_433:184873..189082-

>TCONS_00065198 ID=TCONS_00065198|Name=TCONS_00065198|organism=Clytia hemisphaerica|type=CDS|length=7002bp|location=Sequence derived from alignment at scaffold_433:184873..189082- (Clytia hemisphaerica)
GTTGGTGGTACTAATTGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAA
TCCTAACCCCAGTGATTGTTTCAGAGTATTCCTGAATGGACAACCAGATC
TCAATATGTGCAGTCAAGCAACAAATGCTCATAAAAGTTTGATATGGAAT
TGGGCATCGACTACTTGCTTTGAACAATCAACAATGATGATCAGAAAAAG
AAAATATTGAGTTGAACATTGGTGGCTATTCACAAACAGACTCAACAATG
GCTGACAGTAATACAACAGACACTGTATTTGCTGAATTTCATAATGGCTT
CCCTTTCACAGTTCCAGAGGTACAAGCATGGCTTTGGGCATTTGCAATCA
TCCTTTTGGATTGGTCTGGAAACAATGTATCAAATGACCAAACACAAAGA
CCAAGAACTCCTTATTGTGCTTCAAGTAGGATCAACAATTAAACGAGCAG
TCTTCGATACCTTCTACGTTGGTAATGAAACCGAAGGCTACAAGAATCTA
CCAAGTTGGCATATTTGATAAGTTGTACGACAGTGAAAGTTATCAATATG
TGTTGTGTGAGATGAATGAAGAAGAATTCGGTGCCGGTTGGACAGTCATT
CAAAGAAATTATGAAGCTGAAGATCGGGAGAATTTTTGGGGAAGTTATCA
AAGATTTCATCCTTGCGCACGTATTTCCACACAACCAAACTTCCAAATGA
CCTTTGTTCGAACAGAGTGTAACCCTTCTACGGATCCGAAAACACAATTT
GTTCCTGTGGTATACGATGAAGCATCGACCTGCAACGATATACTTCAGAC
TGGTCAAACTAAATCAGATGGACAAAAAACTGTTTACGTCTCTACGAGCT
TTCTGGAAGAATTATCTCTTTAATAGTATGTTTACTGTATTCATAGTATT
TCTATTATCTCCACAATATGAGGCAACATCTTCACTTCAGCAAGCCAAAT
ACGCGTCATGCTTAAATGATAATTTCTATCTCCGAAAGTTCGATAAAGTT
GGCATTACAATTCACTATCATAAAACTGAGATAGTTAATGACCCTGTGAC
AGATTGGAAAAAGTGTTTTCAACGATGCCGACTATTGAATTGTGTTATTT
TCACCGTTTGGAAGATTACTTTGGACAATACTTTCACATGTCGATACTTT
TTTACTTTACGCAATAGGTTGGTGGTACTAATTGTGCTACAGCTTCTAAA
GCTGGTTGGTGGTTTAATCCTAACCCCAGTGATTGTTTCAGAGTATTCCT
GAATGGACAACCAGATCTCAATATGTGCAGTCAAGCAACAAATGCTCATA
AAAGTTTGATATGGAATTGGGCATCGACTACTTGCTTTGAACAATCAACA
ATGATGATCAGAAAAAGAAAATATTGAGTTGAACATTGGTGGCTATTCAC
AAACAGACTCAACAATGGCTGACAGTAATACAACAGACACTGTATTTGCT
GAATTTCATAATGGCTTCCCTTTCACAGTTCCAGAGGTACAAGCATGGCT
TTGGGCATTTGCAATCATCCTTTTGGATTGGTCTGGAAACAATGTATCAA
ATGACCAAACACAAAGACCAAGAACTCCTTATTGTGCTTCAAGTAGGATC
AACAATTAAACGAGCAGTCTTCGATACCTTCTACGTTGGTAATGAAACCG
AAGGCTACAAGAATCTACCAAGTTGGCATATTTGATAAGTTGTACGACAG
TGAAAGTTATCAATATGTGTTGTGTGAGATGAATGAAGAAGAATTCGGTG
CCGGTTGGACAGTCATTCAAAGAAATTATGAAGCTGAAGATCGGGAGAAT
TTTTGGGGAAGTTATCAAAGATTTCATCCTTGCGCACGTATTTCCACACA
ACCAAACTTCCAAATGACCTTTGTTCGAACAGAGTGTAACCCTTCTACGG
ATCCGAAAACACAATTTGTTCCTGTGGTATACGATGAAGCATCGACCTGC
AACGATATACTTCAGACTGGTCAAACTAAATCAGATGGACAAAAAACTGT
TTACGTCTCTACGAGCTTTCTGGAAGAATTATCTCTTTAATAGTATGTTT
ACTGTATTCATAGTATTTCTATTATCTCCACAATATGAGGCAACATCTTC
ACTTCAGCAAGCCAAATACGCGTCATGCTTAAATGATAATTTCTATCTCC
GAAAGTTCGATAAAGTTGGCATTACAATTCACTATCATAAAACTGAGATA
GTTAATGACCCTGTGACAGATTGGAAAAAGTGTTTTCAACGATGCCGACT
ATTGAATTGTGTTATTTTCACCGTTTGGAAGATTACTTTGGACAATACTT
TCACATGTCGATACTTTTTTACTTTACGCAATAGGTTGGTGGTACTAATT
GTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAATCCTAACCCCAGTGAT
TGTTTCAGAGTATTCCTGAATGGACAACCAGATCTCAATATGTGCAGTCA
AGCAACAAATGCTCATAAAAGTTTGATATGGAATTGGGCATCGACTACTT
GCTTTGAACAATCAACAATGATGATCAGAAAAAGAAAATATTGAGTTGAA
CATTGGTGGCTATTCACAAACAGACTCAACAATGGCTGACAGTAATACAA
CAGACACTGTATTTGCTGAATTTCATAATGGCTTCCCTTTCACAGTTCCA
GAGGTACAAGCATGGCTTTGGGCATTTGCAATCATCCTTTTGGATTGGTC
TGGAAACAATGTATCAAATGACCAAACACAAAGACCAAGAACTCCTTATT
GTGCTTCAAGTAGGATCAACAATTAAACGAGCAGTCTTCGATACCTTCTA
CGTTGGTAATGAAACCGAAGGCTACAAGAATCTACCAAGTTGGCATATTT
GATAAGTTGTACGACAGTGAAAGTTATCAATATGTGTTGTGTGAGATGAA
TGAAGAAGAATTCGGTGCCGGTTGGACAGTCATTCAAAGAAATTATGAAG
CTGAAGATCGGGAGAATTTTTGGGGAAGTTATCAAAGATTTCATCCTTGC
GCACGTATTTCCACACAACCAAACTTCCAAATGACCTTTGTTCGAACAGA
GTGTAACCCTTCTACGGATCCGAAAACACAATTTGTTCCTGTGGTATACG
ATGAAGCATCGACCTGCAACGATATACTTCAGACTGGTCAAACTAAATCA
GATGGACAAAAAACTGTTTACGTCTCTACGAGCTTTCTGGAAGAATTATC
TCTTTAATAGTATGTTTACTGTATTCATAGTATTTCTATTATCTCCACAA
TATGAGGCAACATCTTCACTTCAGCAAGCCAAATACGCGTCATGCTTAAA
TGATAATTTCTATCTCCGAAAGTTCGATAAAGTTGGCATTACAATTCACT
ATCATAAAACTGAGATAGTTAATGACCCTGTGACAGATTGGAAAAAGTGT
TTTCAACGATGCCGACTATTGAATTGTGTTATTTTCACCGTTTGGAAGAT
TACTTTGGACAATACTTTCACATGTCGATACTTTTTTACTTTACGCAATA
GGTTGGTGGTACTAATTGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTA
ATCCTAACCCCAGTGATTGTTTCAGAGTATTCCTGAATGGACAACCAGAT
CTCAATATGTGCAGTCAAGCAACAAATGCTCATAAAAGTTTGATATGGAA
TTGGGCATCGACTACTTGCTTTGAACAATCAACAATGATGATCAGAAAAA
GAAAATATTGAGTTGAACATTGGTGGCTATTCACAAACAGACTCAACAAT
GGCTGACAGTAATACAACAGACACTGTATTTGCTGAATTTCATAATGGCT
TCCCTTTCACAGTTCCAGAGGTACAAGCATGGCTTTGGGCATTTGCAATC
ATCCTTTTGGATTGGTCTGGAAACAATGTATCAAATGACCAAACACAAAG
ACCAAGAACTCCTTATTGTGCTTCAAGTAGGATCAACAATTAAACGAGCA
GTCTTCGATACCTTCTACGTTGGTAATGAAACCGAAGGCTACAAGAATCT
ACCAAGTTGGCATATTTGATAAGTTGTACGACAGTGAAAGTTATCAATAT
GTGTTGTGTGAGATGAATGAAGAAGAATTCGGTGCCGGTTGGACAGTCAT
TCAAAGAAATTATGAAGCTGAAGATCGGGAGAATTTTTGGGGAAGTTATC
AAAGATTTCATCCTTGCGCACGTATTTCCACACAACCAAACTTCCAAATG
ACCTTTGTTCGAACAGAGTGTAACCCTTCTACGGATCCGAAAACACAATT
TGTTCCTGTGGTATACGATGAAGCATCGACCTGCAACGATATACTTCAGA
CTGGTCAAACTAAATCAGATGGACAAAAAACTGTTTACGTCTCTACGAGC
TTTCTGGAAGAATTATCTCTTTAATAGTATGTTTACTGTATTCATAGTAT
TTCTATTATCTCCACAATATGAGGCAACATCTTCACTTCAGCAAGCCAAA
TACGCGTCATGCTTAAATGATAATTTCTATCTCCGAAAGTTCGATAAAGT
TGGCATTACAATTCACTATCATAAAACTGAGATAGTTAATGACCCTGTGA
CAGATTGGAAAAAGTGTTTTCAACGATGCCGACTATTGAATTGTGTTATT
TTCACCGTTTGGAAGATTACTTTGGACAATACTTTCACATGTCGATACTT
TTTTACTTTACGCAATAGGTTGGTGGTACTAATTGTGCTACAGCTTCTAA
AGCTGGTTGGTGGTTTAATCCTAACCCCAGTGATTGTTTCAGAGTATTCC
TGAATGGACAACCAGATCTCAATATGTGCAGTCAAGCAACAAATGCTCAT
AAAAGTTTGATATGGAATTGGGCATCGACTACTTGCTTTGAACAATCAAC
AATGATGATCAGAAAAAGAAAATATTGAGTTGAACATTGGTGGCTATTCA
CAAACAGACTCAACAATGGCTGACAGTAATACAACAGACACTGTATTTGC
TGAATTTCATAATGGCTTCCCTTTCACAGTTCCAGAGGTACAAGCATGGC
TTTGGGCATTTGCAATCATCCTTTTGGATTGGTCTGGAAACAATGTATCA
AATGACCAAACACAAAGACCAAGAACTCCTTATTGTGCTTCAAGTAGGAT
CAACAATTAAACGAGCAGTCTTCGATACCTTCTACGTTGGTAATGAAACC
GAAGGCTACAAGAATCTACCAAGTTGGCATATTTGATAAGTTGTACGACA
GTGAAAGTTATCAATATGTGTTGTGTGAGATGAATGAAGAAGAATTCGGT
GCCGGTTGGACAGTCATTCAAAGAAATTATGAAGCTGAAGATCGGGAGAA
TTTTTGGGGAAGTTATCAAAGATTTCATCCTTGCGCACGTATTTCCACAC
AACCAAACTTCCAAATGACCTTTGTTCGAACAGAGTGTAACCCTTCTACG
GATCCGAAAACACAATTTGTTCCTGTGGTATACGATGAAGCATCGACCTG
CAACGATATACTTCAGACTGGTCAAACTAAATCAGATGGACAAAAAACTG
TTTACGTCTCTACGAGCTTTCTGGAAGAATTATCTCTTTAATAGTATGTT
TACTGTATTCATAGTATTTCTATTATCTCCACAATATGAGGCAACATCTT
CACTTCAGCAAGCCAAATACGCGTCATGCTTAAATGATAATTTCTATCTC
CGAAAGTTCGATAAAGTTGGCATTACAATTCACTATCATAAAACTGAGAT
AGTTAATGACCCTGTGACAGATTGGAAAAAGTGTTTTCAACGATGCCGAC
TATTGAATTGTGTTATTTTCACCGTTTGGAAGATTACTTTGGACAATACT
TTCACATGTCGATACTTTTTTACTTTACGCAATAGGTTGGTGGTACTAAT
TGTGCTACAGCTTCTAAAGCTGGTTGGTGGTTTAATCCTAACCCCAGTGA
TTGTTTCAGAGTATTCCTGAATGGACAACCAGATCTCAATATGTGCAGTC
AAGCAACAAATGCTCATAAAAGTTTGATATGGAATTGGGCATCGACTACT
TGCTTTGAACAATCAACAATGATGATCAGAAAAAGAAAATATTGAGTTGA
ACATTGGTGGCTATTCACAAACAGACTCAACAATGGCTGACAGTAATACA
ACAGACACTGTATTTGCTGAATTTCATAATGGCTTCCCTTTCACAGTTCC
AGAGGTACAAGCATGGCTTTGGGCATTTGCAATCATCCTTTTGGATTGGT
CTGGAAACAATGTATCAAATGACCAAACACAAAGACCAAGAACTCCTTAT
TGTGCTTCAAGTAGGATCAACAATTAAACGAGCAGTCTTCGATACCTTCT
ACGTTGGTAATGAAACCGAAGGCTACAAGAATCTACCAAGTTGGCATATT
TGATAAGTTGTACGACAGTGAAAGTTATCAATATGTGTTGTGTGAGATGA
ATGAAGAAGAATTCGGTGCCGGTTGGACAGTCATTCAAAGAAATTATGAA
GCTGAAGATCGGGAGAATTTTTGGGGAAGTTATCAAAGATTTCATCCTTG
CGCACGTATTTCCACACAACCAAACTTCCAAATGACCTTTGTTCGAACAG
AGTGTAACCCTTCTACGGATCCGAAAACACAATTTGTTCCTGTGGTATAC
GATGAAGCATCGACCTGCAACGATATACTTCAGACTGGTCAAACTAAATC
AGATGGACAAAAAACTGTTTACGTCTCTACGAGCTTTCTGGAAGAATTAT
CTCTTTAATAGTATGTTTACTGTATTCATAGTATTTCTATTATCTCCACA
ATATGAGGCAACATCTTCACTTCAGCAAGCCAAATACGCGTCATGCTTAA
ATGATAATTTCTATCTCCGAAAGTTCGATAAAGTTGGCATTACAATTCAC
TATCATAAAACTGAGATAGTTAATGACCCTGTGACAGATTGGAAAAAGTG
TTTTCAACGATGCCGACTATTGAATTGTGTTATTTTCACCGTTTGGAAGA
TTACTTTGGACAATACTTTCACATGTCGATACTTTTTTACTTTACGCAAT
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040875XLOC_040875Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065198-proteinTCONS_00065198-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065198-exon-scaffold_433-1575043694:188547..189082TCONS_00065198-exon-scaffold_433-1575043694:188547..189082Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1575043694:187848..188011TCONS_00065198-exon-scaffold_433-1575043694:187848..188011Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1575043694:187264..187423TCONS_00065198-exon-scaffold_433-1575043694:187264..187423Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1575043694:186579..186752TCONS_00065198-exon-scaffold_433-1575043694:186579..186752Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1575043694:186087..186195TCONS_00065198-exon-scaffold_433-1575043694:186087..186195Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1575043694:184873..185291TCONS_00065198-exon-scaffold_433-1575043694:184873..185291Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:188547..189082TCONS_00065198-exon-scaffold_433-1510915933:188547..189082Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:187848..188011TCONS_00065198-exon-scaffold_433-1510915933:187848..188011Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:187264..187423TCONS_00065198-exon-scaffold_433-1510915933:187264..187423Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:186579..186752TCONS_00065198-exon-scaffold_433-1510915933:186579..186752Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:186087..186195TCONS_00065198-exon-scaffold_433-1510915933:186087..186195Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1510915933:184873..185291TCONS_00065198-exon-scaffold_433-1510915933:184873..185291Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:188547..189082TCONS_00065198-exon-scaffold_433-1491911889:188547..189082Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:187848..188011TCONS_00065198-exon-scaffold_433-1491911889:187848..188011Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:187264..187423TCONS_00065198-exon-scaffold_433-1491911889:187264..187423Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:186579..186752TCONS_00065198-exon-scaffold_433-1491911889:186579..186752Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:186087..186195TCONS_00065198-exon-scaffold_433-1491911889:186087..186195Clytia hemisphaericaexon
TCONS_00065198-exon-scaffold_433-1491911889:184873..185291TCONS_00065198-exon-scaffold_433-1491911889:184873..185291Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:184873..189082 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0786646	0.230131	0.0593787	0.232371	0.0353612	0	0.16856	0.410289	0.729181	0.328439	0.504753	0.82078	10.9169	9.85222	1.44428	0.463381	0.885798	0.706156	16.5293	15.5175	4.84232	4.89695	1.44312	3.38936	4.25109	6.25632	0.395504	0.345349	0.116415	0.148261
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
Blast
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BLAST of TCONS_00065198 vs. Swiss-Prot (Human)
Match: ANGL6 (Angiopoietin-related protein 6 OS=Homo sapiens GN=ANGPTL6 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.228e-22
Identity = 69/235 (29.36%), Postives = 106/235 (45.11%), Query Frame = 1 
Query:  556 ISTQPNFQMTFVRTECNPSTDPKTQFVPVVYDEA----STCNDILQTGQTKSGIYQVGIFDKLYDSESYQYVLCEMNEEEFGAGWTVIQRNYEAEDRENFWGSYQRYKHGFGHLQSSFWIGLETMYQMTKHKDQELLIVLQV-GSTIKRAVFDTFYVGNETEGYKLNIGGYSQTDSTMADSNTTDTVFAEFHNGFPFTVPEVG----GTNCATASKAGWWFNPNPSDCFRVFLNG 1233
            +   P  Q    + +  P   P     P V  +       C +  Q G  +SG+Y++ +   +        V CE   E  G GWTVIQR  +     NF+ ++Q YK GFG     +W+GLE +YQ+T   D ELL++L+  G    RA +D F +  E++ Y+L +G Y          +  D++   +HN  PF+  +        NCA   + GWW++     C    LNG
Sbjct:  220 LDPAPEPQRDQTQRQQEPMASPMPAGHPAVPTKPVGPWQDCAEARQAGHEQSGVYELRVGRHVVS------VWCEQQLE--GGGWTVIQRRQDGS--VNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQY--------HGDAGDSL--SWHNDKPFSTVDRDRDSYSGNCALYQRGGWWYH----ACAHSNLNG 430
The following BLAST results are available for this feature:
BLAST of TCONS_00065198 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL63.228e-2229.36Angiopoietin-related protein 6 OS=Homo sapiens GN=... [more]
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