TCONS_00064514-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064514-protein
Unique NameTCONS_00064514-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064514-protein ID=TCONS_00064514-protein|Name=TCONS_00064514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MFNMVKSTDSNEEKKEPTMRVGDEFQAEVPDVLHDSSLDKDHRPEPLLVW
APCENVSDEKMDEYLRVAKDKHGYNMEQALGLLYWHKYDIDKTSEDLRNF
TPLPDAWSMEDQVIFEQSFSSYGKHFPX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040461XLOC_040461Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064514TCONS_00064514Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000949ELM2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000949ELM2 domainSMARTSM01189ELM2_2coord: 19..72
e-value: 2.9E-12
score: 56.7
IPR000949ELM2 domainPFAMPF01448ELM2coord: 19..69
e-value: 1.3E-14
score: 54.5
IPR000949ELM2 domainPROSITEPS51156ELM2coord: 17..101
score: 23.699

Blast
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BLAST of TCONS_00064514-protein vs. Swiss-Prot (Human)
Match: RCOR1 (REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.450e-38
Identity = 61/112 (54.46%), Postives = 87/112 (77.68%), Query Frame = 0 
Query:   19 MRVGDEFQAEVPDV----LHDSSLDKDHRPEPLLVWAPCENVSDEKMDEYLRVAKDKHGYNMEQALGLLYWHKYDIDKTSEDLRNFTPLPDAWSMEDQVIFEQSFSSYGKHF 126
            MRVG ++QA VPD     L   S ++D+    +LVW+P +N+S+ K+DEY+ +AK+KHGYNMEQALG+L+WHK++I+K+  DL NFTP PD W++ED+V+FEQ+FS +GK F
Sbjct:  105 MRVGPQYQAVVPDFDPAKLARRSQERDNLG--MLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKTF 214
The following BLAST results are available for this feature:
BLAST of TCONS_00064514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RCOR13.450e-3854.46REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 S... [more]
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