TCONS_00063352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063352-protein
Unique NameTCONS_00063352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063352-protein ID=TCONS_00063352-protein|Name=TCONS_00063352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MDDRDSKQDDYFDALALFNPLERECIQNIESEENLMERLQDQKEAAIERL
WYTFQSAASSLAQLHKERATCDCCERCLYRKNNHDRWLPFQGAANKVTHL
FKDGSDALRAGIELGYHAGIQRRNKEITNWTKKKRKHVRREDILLHLSGR
SPPRKRESRTGNGISLSPKPMDSELLNFGENKDFDFASFVEGRNPFAPQE
GGRKRHSDINMLDSPHKRGRFT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039699XLOC_039699Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063352TCONS_00063352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029196DUF4588
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..222
IPR029196Protein of unknown function DUF4588PFAMPF15251DUF4588coord: 22..162
e-value: 1.1E-36
score: 126.8

Blast
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BLAST of TCONS_00063352-protein vs. Swiss-Prot (Human)
Match: CP072 (UPF0472 protein C16orf72 OS=Homo sapiens GN=C16orf72 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.947e-23
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 0 
Query:   18 FNPLERECIQNIESEENLMERLQDQKEAAI------ERLWYTFQSAASSLAQLHKERATCDCCERCLYRKNNHDRWLPFQGAANKVTHLFKDGSDALRAGIELGYHAGIQRRNKEITNWTKKKRKHVRREDILLHLSGRSPP 153
            F+  ER+C+   E +E L   LQ++  AA       ++LW+ FQ++A+++AQL+K+R    C +  L        W+PFQ AA  VT+L+K+  D  +   ++G   G QRRNK++  W KK+R+ +RRED++  L G+ PP
Sbjct:   21 FSKWERQCLAEAEQDEQLPPELQEEAAAAAQPEHKQQKLWHLFQNSATAVAQLYKDRV---CQQPGL------SLWVPFQNAATAVTNLYKESVDTHQRSFDIGIQIGYQRRNKDVLAWVKKRRRTIRREDLISFLCGKVPP 153
The following BLAST results are available for this feature:
BLAST of TCONS_00063352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP0721.947e-2337.32UPF0472 protein C16orf72 OS=Homo sapiens GN=C16orf... [more]
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