TCONS_00063352 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063352
Unique NameTCONS_00063352
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1615

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063352 ID=TCONS_00063352|Name=TCONS_00063352|organism=Clytia hemisphaerica|type=transcript|length=1615bp
TTTTAAGCGGGTGCGCATGCGCATTTCTTTTCTTGGTATTTTAATTTCGG
TGTATTCCGTAAAGGATGTTGGGAGTTTATAAACCCACAATGCAACGCTC
CGGACTACAAGAACGGTTCAAAACAGAGCGAAACGAAACGAACGAAAAAC
CAGAAAAATCATTGTAAATTTTGTGGATGAGTTTTTGACTTTGACCCAGA
GCATTTATTCTCACTGAATACTTCGTTATCAGGTAGCTAGTTAAATGGAT
GATAGAGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATTATTCAA
TCCACTAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAAATTTGA
TGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTATGGTAC
ACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGaacgTGC
AACATGTGACTGCTGTGAGCGATGTTTATACAGAAAAAATAATCATGATC
GGTGGTTACCATTTCAAGGGGCTGCAAATAAAGTCACACATCTTTTCAAA
GATGGAAGTGATGCACTGAGAGCTGGAATTGAACTCGGTTATCACGCAGG
AATACAACggagaaataaagaaattacaaaTTGGACTAAAAAGAAGCGGA
AACATGTTCGCAGAGAAGACATTTTGTTACATTTATCTGGGCGGTCGCCA
CCACGGAAGCGCGAGTCACGAACCGGTAATGGTATATCGCTTTCCCCGAA
ACCAATGGATAGTGAATTATTGAACTTTGGTGAAAATAAAGACTTTGATT
TTGCCTCTTTCGTTGAAGGGCGTAACCCATTTGCGCCCCAAGAAGGAGGT
CGTAAACGCCACAGTGATATCAACATGCTTGATTCACCTCACAAGCGAGG
ACGGTTTACTTAGGATGTGTTTACTTAGGTCAATGATGCCCCAGAGTTAC
ATCCTTCAAATGCTGTCGGTTCTTGTCACCCTGACACCTTTTGAGAATTT
ACAGTGTTTTTGACATTGAATTAAACATTTTCGAGAGGTTTGAATGCTAA
CAAAATCAACTAAATTCTATATTTTATCCATGTGTCGGGAAGTTACGATT
CATTTCGAACAATTTTGAAAGATGTGCTTATTTCAAATTATGTGCCATGA
AATTAAGCTCAAAAGGGTGGGAATTTCAAAAGTAATGACAAGTAAACCTT
GACTTTTTTAGTGTAGATTAAACCGTAGGGACGTGTTTACAGTCGTGGAT
ACGTCATTGTAAAATGGTTTTGATTGCTGGATGGATGATAGCGAGAATGA
TTTAAAGACGTTATAATGAGAGGTTTGATCTGtacctttttgaaaatgtt
attggTGTAAAATGAAGAAATCATGATGAGAAATTGGCCATACTGTAAAC
AGTAGAACtgtgtttttgatgatttgaaaTTCTATATATAAAGTATTCCT
ACTTGAATTTTTTTCGGACGATAGAATaatttgtgtgaatattttttcaa
gacaattttttcatgtttatgttttttagtTATTATCGTAAGAAATGTAC
TCTAAAAACCAATTTGAACTCGATAATTCATGTCAATCCGTTTCtttgat
catttttttttcaga
Run BLAST on NCBI

protein sequence of TCONS_00063352-protein

>TCONS_00063352-protein ID=TCONS_00063352-protein|Name=TCONS_00063352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MDDRDSKQDDYFDALALFNPLERECIQNIESEENLMERLQDQKEAAIERL
WYTFQSAASSLAQLHKERATCDCCERCLYRKNNHDRWLPFQGAANKVTHL
FKDGSDALRAGIELGYHAGIQRRNKEITNWTKKKRKHVRREDILLHLSGR
SPPRKRESRTGNGISLSPKPMDSELLNFGENKDFDFASFVEGRNPFAPQE
GGRKRHSDINMLDSPHKRGRFT
Run BLAST on NCBI

transcript from alignment at scaffold_386:7829..15179-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063352 ID=TCONS_00063352|Name=TCONS_00063352|organism=Clytia hemisphaerica|type=transcript|length=7351bp|location=Sequence derived from alignment at scaffold_386:7829..15179- (Clytia hemisphaerica)
TTTTAAGCGGGTGCGCATGCGCATTTCTTTTCTTGGTATTTTAATTTCGG
TGTATTCCGTAAAGGATGTTGGGAGTTTATAAACCCACAATGCAACGCTC
CGGACTACAAGAACGGTTCAAAACAGAGCGAAACGAAACGAACGAAAAAC
CAGAAAAATCATTGTAAATTTTGTGGATGAGTTTTTGACTTTGACCCAGA
GCATTTATTCTCACTGAATACTTCGTTATCAGGTAGCTAGTTAAATGGAT
GATAGAGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATTATTCAA
TCCACTAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAAATTTGA
TGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTATGGTAC
ACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGGCAAGAA
GAAAACATATTGTTTATATTTTTTGAGTGAATTTCAGCTTTCTGAAAGAA
TGAATGGATTTGGAACCCTCTGTGATGCCTACACTGCCCGTACTGCCCGT
ATTATGTTTGTACGGGCTGTATGGGCGAGTCAACTTTATTTACAACCCGT
ACGTCCCATACATTTGTACAGGCTGAATGGGCAAGTCAACCTAATTTACA
TCAAACCCTGTATTTTCAAATATAAAATAAATTGACTACTATGCAGAATA
GCCAAGCTTTTTAAAAATCCAAAGATATGAATTGCATAGCTTAATTACCA
AAAAATAGTGCTTTGGGACACTGGGATTTTCTGGAATGGCCCACTGCGAT
TTTCAGAGTAATGTTTAAAAATCAGGGAAATCCTTAATTAATGTTTGTAA
CACTGTAAGTGCTGTTCAGTTTCCTTAACTTTAAGGGACCCCATTTTCTG
GCTCAATAAAACCTTTATCAGTCAGTTGTTTAAGAGAAAAACTGCAATTA
TTGCTCTTTTCGGAAATTATTGCCGAAAACGGCAATTTTTTAACAATGAA
ATGCTGAATCAGCAGAAAAATAAAAAAGTAAACAAAATGCCTTTTTTGCA
AATAAAAATTGACTTTATTATTGAACACGTGGTATTTGACACCCTTGCGA
TAAGTAGGCCCACTGTGCCTCATTTAGTTTTGTTTTCAACTGGTCTTTGT
TGGCAGTGTATTGAGCAACGAAAAATTGAAAAATCACTTTTAAAAATCCG
AAAAACCTTTTTCTCAGTGCAATTTTACTATTTTCAAACACCACTGACAT
CTTTGCCCTTTAAAAAGGACAACACATTTTGCTGATTCAGCATTTCATCG
TTGAAAAAATTGCCTTTTTATGGCAATAATTGCAGAAAAGAGCAATAATT
GCAGTTTATATCTTAAACACCCGACTGTTTATGTGTACAATTTGAACGCA
AAAAAAATTTACAATCAAGGTTGCTTAAAATTGGAAAATTTGGGAAATGT
TTGATTTTAGATCCCTCAAAATCTCGCCATATCCCATGCAAGATACCTCA
AAATCGGAAACAGAATAATTCTTGATTAGGAAGGAGTAGTTAGTTTTATT
GCTCTGTATCGGATAAAGAAAAAATACTATCTTTAAAGATCTTTAATTTT
TCTTCACAAGCAAAATTGGATATTATTTCAATCCAATTAAAGATCGCTGT
GGGATCAGAAACTGTCAAAAACCAGCTTTTTCCAATTTTCATTTAGTTAC
AGGAACGAACACACCTTCAAATTTCCCAGAAAAAAATGTGTGCTCCACCG
TTACGTATATAAAAATGTGTTTGGGGGTAAACCAAACTGTAAATCATCTG
TAATGCTTGGTCTCTGGAGGTAAACAAATAGCTGTTTTTGCCTGTGTTCC
CTTAGGGGAGCTGTTTTTTAGCCAATTAAAACCCCCTGAAATTTTAAAAT
GTTCTTTCTATACATGATATTATACCACCCTGAAAATTGAAAAAAAACTC
TTTCCCTAACCTCTTGCAGGCAAAAATGTGTTCAAATTACCTCCCAATAA
ATTTTATACGCAACGATGGAGTGCACGGTCTTCCAGGTCATTTTGGAGAA
GCTTGAATTATGGGAAAGGTGTATTATATTTTTTATATTTGTATTGATGA
TTTTGCGTGAAATCTTGCCAACTTGATTTTGGGTAAATTTTGGGGATTTC
ATACCGTAAACATTTTACCAGTGGCACCAGCTGTTCAATATAAGATTTCT
GGATAACAATTTTATAGAAACTTATATTCAATTCAAAATTCTCTCAAATT
CCTACTATTCGTCTAAATGTTTGATTTTTAAATTTCTTTTGAAAAAGTAA
TTAAAATTAGGAAGAGAAGTCCATCAGAAGAGTGTTCAATGATCAGGACC
AGAGGTTCTTGTAATAAAATAACAGAATTCAAACTTCAAAACAAGACTTT
TCACTGTTTTTTTATTTTTCAAACAGTCAAAAAAGTGAATTTTGTCAACT
TTTTTAATGTTTAGTTGATGATTTTCTATAAAGGTAAAACTGATAGTCTT
GAAATTCAGATTTCTCATAGAATGTACAATATTTTATCGAGAAATTTCTG
TTCTCAATTGAAAATATCCGTATGCATATGAGTAACTAGAAACCTTTGTA
TAAGACCATGTTCACACGTTACTGTTCCGTTTCTTTCCAGTATGTTTTTC
GTTACGGATCAAGTGTGTTCATATTGTTTTCGGAACGTTTCCGAGCAAGA
AAACAGAGCAGTTCTGTTTGGATGAAAAAAGCGGAGCGAAACCGTTTCAA
TCTGTTTTGCTTTTTAACGTCTTCTTTTTTGACGTTTCGAATTTCGGAAC
GGAACGGAACCGNTAAAGAAAAAATACTATCTTTAAAGATCTTTAATTTT
TCTTCACAAGCAAAATTGGATATTATTTCAATCCAATTAAAGATCGCTGT
GGGATCAGAAACTGTCAAAAACCAGCTTTTTCCAATTTTCATTTAGTTAC
AGGAACGAACACACCTTCAAATTTCCCAGAAAAAAATGTGTGCTCCACCG
TTACGTATATAAAAATGTGTTTGGGGGTAAACCAAACTGTAAATCATCTG
TAATGCTTGGTCTCTGGAGGTAAACAAATAGCTGTTTTTGCCTGTGTTCC
CTTAGGGGAGCTGTTTTTTAGCCAATTAAAACCCCCTGAAATTTTAAAAT
GTTCTTTCTATACATGATATTATACCACCCTGAAAATTGAAAAAAAACTC
TTTCCCTAACCTCTTGCAGGCAAAAATGTGTTCAAATTACCTCCCAATAA
ATTTTATACGCAACGATGGAGTGCACGGTCTTCCAGGTCATTTTGGAGAA
GCTTGAATTATGGGAAAGGTGTATTATATTTTTTATATTTGTATTGATGA
TTTTGCGTGAAATCTTGCCAACTTGATTTTGGGTAAATTTTGGGGATTTC
ATACCGTAAACATTTTACCAGTGGCACCAGCTGTTCAATATAAGATTTCT
GGATAACAATTTTATAGAAACTTATATTCAATTCAAAATTCTCTCAAATT
CCTACTATTCGTCTAAATGTTTGATTTTTAAATTTCTTTTGAAAAAGTAA
TTAAAATTAGGAAGAGAAGTCCATCAGAAGAGTGTTCAATGATCAGGACC
AGAGGTTCTTGTAATAAAATAACAGAATTCAAACTTCAAAACAAGACTTT
TCACTGTTTTTTTATTTTTCAAACAGTCAAAAAAGTGAATTTTGTCAACT
TTTTTAATGTTTAGTTGATGATTTTCTATAAAGGTAAAACTGATAGTCTT
GAAATTCAGATTTCTCATAGAATGTACAATATTTTATCGAGAAATTTCTG
TTCTCAATTGAAAATATCCGTATGCATATGAGTAACTAGAAACCTTTGTA
TAAGACCATGTTCACACGTTACTGTTCCGTTTCTTTCCAGTATGTTTTTC
GTTACGGATCAAGTGTGTTCATATTGTTTTCGGAACATCCCGAGCAAGAA
AACAGAGCAGTTCTGTTTGGATGAAAAAAGCGGAGCGAAACCGTTTCAAT
CTGTTTTGCTTTTTAACGTCTTCTTTTTTGACGTTTCGAATTTCGGAACG
GAACGGAACGGAACGGAACCGTAACGTCTGAACATGGTCTAAGTTCCTAG
CTCACCTGAGCTTGCTCCACTGTAGAAGGTTTGGGACAACGCAATTTTTC
GCGTTGGTGCGATGCAACATGCTCTATCTCGCCAACACAAGAAAAAAGTG
TGTGTCTGTTAGCTGATGATCAGAAGATTTGAATTCAAATGAATGATGAG
ACTACCCAAAACGGATGAGGGGGGGGGTCAACGATTCAGACGACAGTATT
TGTAACATATGAAGTGATGTTCAAACTGAAAATGAGAATATATGACAAAT
AAATATTTGAATTGAACAATGAATTGAACAAAAATGTATCCAATGTCCCA
AGGTTTCTTTTTTTGTTTCATGGGACAAAAAGTGAGAGAAATACCCAGAA
GACACGCTGATTTCGTCCATGGGACAAAAATGAGATTTCACTTTTATTTC
TAGAAAGAAAAATAGGGTTGAGACACAAGAAAACGTTTCAGGTTGGTGGG
ATGGAGCATGTTGCATTGCACCAATGCGAAAAAAACTTCTTGTGTCCCCA
TGCCTTAATGGCTGTATTTATAAGACTTTAGGAAGTATACTGAGCAAGTC
TGCTTCAATCAATCACTTTGAATGACAGAGGGAAAGTTCAGTTGGTTCAG
TAAATTTCTTAAAGATCTCCAACTGGGTGTTTCCCCCAAATCTCCATATG
TTTGTCTCCTTGATTTCCTCGTTTTGCTACATGTTGTTTTGAACAAAACA
GTAATTTTGTATTTAACCTGATTTAACAATAAAAGATGTAAAGTCTCTGT
AAAGCTCTTGAATATATTTTTCCATTTTATTTTTCAGAACGTGCAACATG
TGACTGCTGTGAGCGATGTTTATACAGAAAAAATAATCATGATCGGTGGT
TACCATTTCAAGGGGCTGCAAATAAAGTCACACATCTTTTCAAAGGTGGG
TTAACGTTATCGTAGCTCATTTTCATAGCCCATAGTCCTCGTTACTAAGC
GTTAATTAAAATTATTTTATTGCTCTTAAACATTTTATTTATTTATTCAT
ATTTCATTTTTTTAAACAAAAAAAATGTACGGATAAACAGGGGTTATGGG
TCCTAGGACCTTTTAGTATGAAATATATAGATGATAGATTTATAGGGTTC
ATTTCTATGATAGGACAGAATGATAGTCTCTTTTTGCTGTTAAAATTCCA
ATTGTCAACTTGTCAAATGGATTCTGCAATTCTTTTATTTCGATTGGCTA
TCTGTTGAAGTGTCTTCCCAGATATTCTCTTTCCTTAAAAATAGGAGGTA
CATTCAGTTATTCAGATGTCGATTAAAATTCCCTATAAATTAATTATTTT
TGTCAGGGTCTAGCCATACTTTCGATAATTTTGTATAAGTGAAATCCGAT
GCTTAGTTGTTTTTAATAGCAGAAATATTAATGTTTATAAACTGAAGTAT
CTGACATCATTACAAAATCATCTGATTAATGGTTTGTCTCTCTATTTCTG
TAATTGCTTGGCAACAAAATTATTTTTCAACCAAGTAATTTTCTAAAGCA
CCAAATACCTTTTTTGTCCATAATGGGCCTGTTTATTTAATTAATTAAAA
ATAATGAGTGTGTAATACATTATACATGCACACAGGAAATGTCATCTTGA
TTTTATTATGAGAATAGTATAGCTCCACTTCTTGTACGTAATTACTCATC
AAGCTACTACACAAAATGTCATCCTATCTTCTTATTAGTGATAATAAAGT
TTGGATACATTTTTTTATGGTCATTATAATGTTATTCACTTTTTCTAGAC
CACTTTTTAGACATAATTTTCGGGCTTTAAATCTTATCAAATAAAAATTC
GCCCTAATTCTCTAGCTGATGTTTGAAATTTGTTGATATTTTCGACATAT
TGTCTTATTTTTATGCATTATTTTTTGACAAAATGGCTTGAAACTTTAAC
TTTTTGTGGTATTTGAATTTGAAAATGGATTAGTTTAGTTTTGGATTAAG
TTTGGATAAATTCAAAATGAGTTTTTAGAAGTTTGTAACTCCCCAAATCT
GATACATGCCAAAATAATTCTACTCAAAGTATTTCTAATCTTAATATCCC
AAAAAGAGCAAAATGCGGTTTAAGGCAGAGATTCCCCAAATTTATTACAA
TATTCCTAAAGGCATGCGCTCTCGATGATGCCTTTTTGTACATTCAGTTT
CTTGTATCTTCTTCAGACATTCTCCTTTTAATTTCAGATGGAAGTGATGC
ACTGAGAGCTGGAATTGAACTCGGTTATCACGCAGGAATACAACGGAGAA
ATAAAGAAATTACAAATTGGACTAAAAAGAAGCGGAAACATGTTCGCAGA
GAAGACATTTTGTTACATTTATCTGGGCGGTCGCCACCACGGAAGCGCGA
GTCACGAACCGGTAATGGTATATCGCTTTCCCCGAAACCAATGGATAGTG
AATTATTGAACTTTGGTGAAAATAAAGACTTTGATTTTGCCTCTTTCGTT
GAAGGGCGTAACCCATTTGCGCCCCAAGAAGGAGGTCGTAAACGCCACAG
TGATATCAACATGCTTGATTCACCTCACAAGCGAGGACGGTTTACTTAGG
ATGTGTTTACTTAGGTCAATGATGCCCCAGAGTTACATCCTTCAAATGCT
GTCGGTTCTTGTCACCCTGACACCTTTTGAGAATTTACAGTGTTTTTGAC
ATTGAATTAAACATTTTCGAGAGGTTTGAATGCTAACAAAATCAACTAAA
TTCTATATTTTATCCATGTGTCGGGAAGTTACGATTCATTTCGAACAATT
TTGAAAGATGTGCTTATTTCAAATTATGTGCCATGAAATTAAGCTCAAAA
GGGTGGGAATTTCAAAAGTAATGACAAGTAAACCTTGACTTTTTTAGTGT
AGATTAAACCGTAGGGACGTGTTTACAGTCGTGGATACGTCATTGTAAAA
TGGTTTTGATTGCTGGATGGATGATAGCGAGAATGATTTAAAGACGTTAT
AATGAGAGGTTTGATCTGTACCTTTTTGAAAATGTTATTGGTGTAAAATG
AAGAAATCATGATGAGAAATTGGCCATACTGTAAACAGTAGAACTGTGTT
TTTGATGATTTGAAATTCTATATATAAAGTATTCCTACTTGAATTTTTTT
CGGACGATAGAATAATTTGTGTGAATATTTTTTCAAGACAATTTTTTCAT
GTTTATGTTTTTTAGTTATTATCGTAAGAAATGTACTCTAAAAACCAATT
TGAACTCGATAATTCATGTCAATCCGTTTCTTTGATCATTTTTTTTTCAG
A

Coding sequence (CDS) from alignment at scaffold_386:7829..15179-

>TCONS_00063352 ID=TCONS_00063352|Name=TCONS_00063352|organism=Clytia hemisphaerica|type=CDS|length=2007bp|location=Sequence derived from alignment at scaffold_386:7829..15179- (Clytia hemisphaerica)
ATGGAAGTGATGCACTGAGAGCTGGAATTGAACTCGGTTATCACGCAGGA
ATACAACGGAGAAATAAAGAAATTACAAATTGGACTAAAAAGAAGCGGAA
ACATGTTCGCAGAGAAGACATTTTGTTACATTTATCTGGGCGGTCGCCAC
CACGGAAGCGCGAGTCACGAACCGGTAATGGTATATCGCTTTCCCCGAAA
CCAATGGATAGTGAATTATTGAACTTTGGTGAAAATAAAGACTTTGATTT
TGCCTCTTTCGTTGAAGGGCGTAACCCATTTGCGCCCCAAGAAGGAGGTC
GTAAACGCCACAGTGATATCAACATGCTTGATTCACCTCACAAGCGAGGA
CGGTTTACTTAGAACGTGCAACATGTGACTGCTGTGAGCGATGTTTATAC
AGAAAAAATAATCATGATCGGTGGTTACCATTTCAAGGGGCTGCAAATAA
AGTCACACATCTTTTCAAAGATGGATGATAGAGACAGCAAGCAGGATGAT
TATTTCGATGCTTTGGCATTATTCAATCCACTAGAGCGTGAATGTATTCA
AAATATAGAAAGTGAGGAAAATTTGATGGAAAGACTACAGGATCAGAAAG
AAGCTGCCATTGAGCGGCTATGGTACACATTTCAAAGTGCTGCATCGTCA
CTTGCACAGCTACATAAAGATGGAAGTGATGCACTGAGAGCTGGAATTGA
ACTCGGTTATCACGCAGGAATACAACGGAGAAATAAAGAAATTACAAATT
GGACTAAAAAGAAGCGGAAACATGTTCGCAGAGAAGACATTTTGTTACAT
TTATCTGGGCGGTCGCCACCACGGAAGCGCGAGTCACGAACCGGTAATGG
TATATCGCTTTCCCCGAAACCAATGGATAGTGAATTATTGAACTTTGGTG
AAAATAAAGACTTTGATTTTGCCTCTTTCGTTGAAGGGCGTAACCCATTT
GCGCCCCAAGAAGGAGGTCGTAAACGCCACAGTGATATCAACATGCTTGA
TTCACCTCACAAGCGAGGACGGTTTACTTAGAACGTGCAACATGTGACTG
CTGTGAGCGATGTTTATACAGAAAAAATAATCATGATCGGTGGTTACCAT
TTCAAGGGGCTGCAAATAAAGTCACACATCTTTTCAAAGATGGATGATAG
AGACAGCAAGCAGGATGATTATTTCGATGCTTTGGCATTATTCAATCCAC
TAGAGCGTGAATGTATTCAAAATATAGAAAGTGAGGAAAATTTGATGGAA
AGACTACAGGATCAGAAAGAAGCTGCCATTGAGCGGCTATGGTACACATT
TCAAAGTGCTGCATCGTCACTTGCACAGCTACATAAAGATGGAAGTGATG
CACTGAGAGCTGGAATTGAACTCGGTTATCACGCAGGAATACAACGGAGA
AATAAAGAAATTACAAATTGGACTAAAAAGAAGCGGAAACATGTTCGCAG
AGAAGACATTTTGTTACATTTATCTGGGCGGTCGCCACCACGGAAGCGCG
AGTCACGAACCGGTAATGGTATATCGCTTTCCCCGAAACCAATGGATAGT
GAATTATTGAACTTTGGTGAAAATAAAGACTTTGATTTTGCCTCTTTCGT
TGAAGGGCGTAACCCATTTGCGCCCCAAGAAGGAGGTCGTAAACGCCACA
GTGATATCAACATGCTTGATTCACCTCACAAGCGAGGACGGTTTACTTAG
AACGTGCAACATGTGACTGCTGTGAGCGATGTTTATACAGAAAAAATAAT
CATGATCGGTGGTTACCATTTCAAGGGGCTGCAAATAAAGTCACACATCT
TTTCAAAGATGGATGATAGAGACAGCAAGCAGGATGATTATTTCGATGCT
TTGGCATTATTCAATCCACTAGAGCGTGAATGTATTCAAAATATAGAAAG
TGAGGAAAATTTGATGGAAAGACTACAGGATCAGAAAGAAGCTGCCATTG
AGCGGCTATGGTACACATTTCAAAGTGCTGCATCGTCACTTGCACAGCTA
CATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039699XLOC_039699Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063352-proteinTCONS_00063352-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063352-exon-scaffold_386-1575043694:14737..15179TCONS_00063352-exon-scaffold_386-1575043694:14737..15179Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1575043694:10185..10292TCONS_00063352-exon-scaffold_386-1575043694:10185..10292Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1575043694:7829..8892TCONS_00063352-exon-scaffold_386-1575043694:7829..8892Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1510915933:14737..15179TCONS_00063352-exon-scaffold_386-1510915933:14737..15179Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1510915933:10185..10292TCONS_00063352-exon-scaffold_386-1510915933:10185..10292Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1510915933:7829..8892TCONS_00063352-exon-scaffold_386-1510915933:7829..8892Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1491911889:14737..15179TCONS_00063352-exon-scaffold_386-1491911889:14737..15179Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1491911889:10185..10292TCONS_00063352-exon-scaffold_386-1491911889:10185..10292Clytia hemisphaericaexon
TCONS_00063352-exon-scaffold_386-1491911889:7829..8892TCONS_00063352-exon-scaffold_386-1491911889:7829..8892Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:7829..15179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
83.0926	73.2774	25.9418	17.1343	69.5878	53.4296	47.1694	51.9951	33.7664	31.3425	24.0562	24.6699	25.1391	22.8133	22.7818	27.1546	30.8572	28.2105	19.286	25.9355	31.6426	30.7374	85.4645	73.3596	76.5881	62.115	44.5297	42.9076	64.2756	71.9925
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029196DUF4588
Blast
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BLAST of TCONS_00063352 vs. Swiss-Prot (Human)
Match: CP072 (UPF0472 protein C16orf72 OS=Homo sapiens GN=C16orf72 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.721e-21
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 2 
Query:  296 FNPLERECIQNIESEENLMERLQDQKEAAI------ERLWYTFQSAASSLAQLHKERATCDCCERCLYRKNNHDRWLPFQGAANKVTHLFKDGSDALRAGIELGYHAGIQRRNKEITNWTKKKRKHVRREDILLHLSGRSPP 703
            F+  ER+C+   E +E L   LQ++  AA       ++LW+ FQ++A+++AQL+K+R    C +  L        W+PFQ AA  VT+L+K+  D  +   ++G   G QRRNK++  W KK+R+ +RRED++  L G+ PP
Sbjct:   21 FSKWERQCLAEAEQDEQLPPELQEEAAAAAQPEHKQQKLWHLFQNSATAVAQLYKDRV---CQQPGL------SLWVPFQNAATAVTNLYKESVDTHQRSFDIGIQIGYQRRNKDVLAWVKKRRRTIRREDLISFLCGKVPP 153
The following BLAST results are available for this feature:
BLAST of TCONS_00063352 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP0722.721e-2137.32UPF0472 protein C16orf72 OS=Homo sapiens GN=C16orf... [more]
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