TCONS_00063341-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063341-protein
Unique NameTCONS_00063341-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063341-protein ID=TCONS_00063341-protein|Name=TCONS_00063341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MSFQFLKIGFEKMIRTSKTRKRFFLFVITTIYILLVNHLYLNGIYVVKEI
SPNSPWLTISTDLKSFVKNVERLLLTKKFVNQHKKHYTTPKVKPNIKLLN
SEDIHVFKGEILILVTSHIKHSSRRDSIRTSWANHARFIDHSQKFNNARY
KTYFVTGYLESFIRKAKIESSTFRDVLITNRTERYWDLSRRIMFGFLWAM
EYCTFDYLLKTDDDVFVNIPNLFTLMYTDPFILKHKDRIFAGKIVKSKSR
TIRDPFSKWYVSQGEWEPDYYPPFATGMGIILSRFVLEKMRSHFDWINPF
RLDDVYVGILINRANISGIGIRNVPQLRATLNEEFSGAHQHYECRYVDKP
IIYHKVVHHWCMEKLTAKSIINSGTENPGRYLNLLIVPFIFINFVVIFLV
KFLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039691XLOC_039691Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063341TCONS_00063341Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR002659Glyco_trans_31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 191..372
e-value: 0.0014
score: 17.5
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 123..317
e-value: 1.7E-35
score: 122.5

Blast
[Close]
BLAST of TCONS_00063341-protein vs. Swiss-Prot (Human)
Match: B3GT5 (Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.687e-24
Identity = 62/209 (29.67%), Postives = 109/209 (52.15%), Query Frame = 0 
Query:  111 ILILVTSHIKHSSRRDSIRTSWANHARFIDHSQKFNNARYKTYFVTGYLESFIRKAKIESSTFR--DVLITNRTERYWDLSRRIMFGFLWAMEYC-TFDYLLKTDDDVFVNIPNLFTLMYTDPFILKHKDRIFAGKIVKSKSRTIRDPFSKWYVSQGEWEPDYYPPFATGMGIILSRFVLEKMRSHFDWINPFRLDDVYVGILINRANI 316
            +++LVTS  K  + R +IR +W    R +   Q       KT+F+ G   S     +++  + R  D++  +  + Y++L+ + M G  W   +C    +++KTD D+F+N+  L     T+  + K++   F    +K     IR PFSKW+VS+ E+  D YPPF +G G + S  V  ++ +    +   +L+DV+VG+ + R NI
Sbjct:   59 LVLLVTSSHKQLAERMAIRQTWGKE-RMVKGKQ------LKTFFLLGTTSSAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYL-----TELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNI 255
The following BLAST results are available for this feature:
BLAST of TCONS_00063341-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GT58.687e-2429.67Beta-1,3-galactosyltransferase 5 OS=Homo sapiens G... [more]
back to top