Net (polypeptide) - C. hemisphaerica

Overview
NameNet
Unique NameTCONS_00062906-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length529

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062906-protein ID=TCONS_00062906-protein|Name=Net|organism=Clytia hemisphaerica|type=polypeptide|length=529bp
MMTQEKFQRDVKNKLKGICDDIDVKMEDLKHGERSVDSSNNENVSQCKRN
RRKCAPSKQYASALVDSNNNSDSSTTHFTTEVIDIEEECVKAKHSTASTT
KRKKTSLDQLLSRAVAKKQKIEQEKTENIIRYPQENEIVGHGQENGQKHN
LNDSIKSSTLQPVHKTARTIQSTPRMDSVESREENAGEEKWYQRPSSPAF
RKRFDPYSYYVHPKHVFSHPNHEYQKDERSPSPPVKYHVERRRFRRSRSP
PTEKFRKYLDYEHSKNARSKYEGQIEKLSSPGSKHREYRAFVERPKSPNV
KREVFESPSEYTQLGRSLSPGGEYVENSTTTVLRPKARRISTPSTLPQKH
FYPANSPVYPPKPSAQSREGSVWSPTATISNEVPRSPIADQAAPTCSKGR
SSKFFPPNKRQVTTNQRYAKLNNTQLQRRLVANARERSRVHALSNAFDAL
RGAIPSYSVDQKLSKLTILRVAINYIDALTQLLAPKTPTTQKRFEKCVDE
CSSVLQQEYGKSKNQIGSGRANGSNEQMH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039396XLOC_039396Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062906TCONS_00062906Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..251
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 433..485
e-value: 5.8E-14
score: 62.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 359..482
e-value: 4.9E-14
score: 51.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 428..479
e-value: 4.3E-13
score: 48.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 427..479
score: 15.345
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 427..484
e-value: 5.84557E-13
score: 63.3871
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 427..484

Blast
[Close]
BLAST of Net vs. Swiss-Prot (Human)
Match: ATOH8 (Protein atonal homolog 8 OS=Homo sapiens GN=ATOH8 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.911e-19
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 0 
Query:  407 PNKRQVTTNQRYAKLNNTQLQRRLVANARERSRVHALSNAFDALRGAIPSYSVDQKLSKLTILRVAINYIDALTQL--LAPKTPTTQKRFEKCVDECSSVLQQEYGKSKNQ 515
            P KR        +++   Q  RRL+ANARER+RVH +S AF+ALR  +P YS  QKLSKL ILR+A NYI +L +L  L      +   F +CV  C+  LQ E G++K +
Sbjct:  210 PRKRPGEATAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAE-GRAKKR 319
The following BLAST results are available for this feature:
BLAST of Net vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATOH82.911e-1945.05Protein atonal homolog 8 OS=Homo sapiens GN=ATOH8 ... [more]
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