TCONS_00061900-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061900-protein
Unique NameTCONS_00061900-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061900-protein ID=TCONS_00061900-protein|Name=TCONS_00061900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MVLLKILKPIQTPLLWRNLQIQNGTLAVVTTCLLCQQQKRYAGHSKWANI
KFKKMHKDNARAKVFGQLSREIIQAVKEKGADPVYNAKLEGLVLKARSSS
MPKERIENSIKNALRSSYEKATQSLFQARGPMKCGLMIDVLAPNVIRTKN
EIKTILKKNDATFISDGSVAFMFDHKGVVTIKDKLSKPSENGGDIVEVVA
DEHAIDQAEEIAIEVGAEDVHFSYNEQLDQRVIQFLCQPLEIQTIRKEME
EKHQQLEILSADVQYLAKSLVDLDEHNMTQADRLIELITNHPDVLNVYDN
IVGYPSSTIKIDQTFT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038816XLOC_038816Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061900TCONS_00061900Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026564Transcrip_reg_TACO1-like_dom3
IPR017856Integrase_Zn-bd_dom-like_N
IPR002876Transcrip_reg_TACO1-like
IPR029072YebC-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
IPR026564Transcriptional regulator TACO1-like, domain 3GENE3D3.30.70.980coord: 256..302
e-value: 0.068
score: 12.7
IPR026564Transcriptional regulator TACO1-like, domain 3GENE3D3.30.70.980coord: 169..255
e-value: 1.8E-15
score: 56.3
IPR017856Integrase, N-terminal zinc-binding domain-likeGENE3D1.10.10.200coord: 41..117
e-value: 2.6E-22
score: 78.7
IPR002876Transcriptional regulator TACO1-likePFAMPF01709Transcrip_regcoord: 45..301
e-value: 1.4E-59
score: 201.3
IPR002876Transcriptional regulator TACO1-likeHAMAPMF_00693Transcrip_reg_TACO1coord: 43..303
score: 22.269
IPR029072YebC-likeSUPERFAMILY75625YebC-likecoord: 43..301

Blast
[Close]
BLAST of TCONS_00061900-protein vs. Swiss-Prot (Human)
Match: TACO1 (Translational activator of cytochrome c oxidase 1 OS=Homo sapiens GN=TACO1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.333e-35
Identity = 87/263 (33.08%), Postives = 141/263 (53.61%), Query Frame = 0 
Query:   42 AGHSKWANIKFKKMHKDNARAKVFGQLSREIIQAVKEKGADPVYNAKLEGLVLKARSSSMPKERIENSIKNALRSSYEKATQSLFQARGPMKCGLMIDVLAPNVIRTKNEIKTILKKNDATFISDGSVAFMFDHKGVVTIKDKLSKPSENGGDIVEVVADEHA---IDQAEEIAIEVGAEDVHFSYNEQLDQRVIQFLCQPLEIQTIRKEMEEKHQQLEILSADVQYLAKSLVDLDEHNMTQADRLIELITNHPDVLNVYDNI 301
            AGH+KW+ ++  K  KD  R+++F +L   I  AVKE G +P +N+ L  ++   RS  MPK  IE     AL+    K T  L++ RGP    L+I+ L+ +  + + +I+ IL KN             FD KGV+               +VEV   E     +++A E+AIE GAEDV  + +E+ ++ V +F+C    +  +RK+++     L  +S  ++++  S V L E ++ QA  LI+ ++NH DV++VYDNI
Sbjct:   58 AGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKSTIE----TALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAV--GARHSFDKKGVI---------------VVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEE-ERNVFKFICDASSLHQVRKKLDS--LGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNI 296
The following BLAST results are available for this feature:
BLAST of TCONS_00061900-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TACO11.333e-3533.08Translational activator of cytochrome c oxidase 1 ... [more]
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