TCONS_00061874-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061874-protein
Unique NameTCONS_00061874-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length349

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061874-protein ID=TCONS_00061874-protein|Name=TCONS_00061874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MADLSARRQISESLRTQSWQQVSIPKDDTTIDRGQDLVLKYYFDRLRHSY
DIIVYDGKTLRHESVANEEDFLAKNKLFNPNLEAESTSILNELSYCLQQC
QKELTGLSFQVEEDVLKMNIKTKLKSGIPFAWTFTLKEATTHMIIEHLVQ
PLAILTSELNRRQQELFYMLERKDRELQDYKDQGAVASRRHLETVQFDRV
NFQTSSNVHQTFLDSCTNPTLNSLTKDLKDLHRNVVLNTASKVLPAEAAP
REQQKAGPSMSTFDTVPIVPGRGEDISSWVNEKRIGGSFVQDQLDAGKDP
LQPDPDTQPVVVTEALSPQEEELKRREALKKKLNEQTEKKAKKKRKIKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038807XLOC_038807Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061874TCONS_00061874Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015381XLF_fam
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006302 double-strand break repair
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..349
NoneNo IPR availableGENE3D1.10.287.450coord: 158..242
e-value: 4.4E-17
score: 61.4
NoneNo IPR availableGENE3D2.170.210.10coord: 7..152
e-value: 1.1E-20
score: 73.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..349
IPR015381XLF familyPFAMPF09302XLFcoord: 18..187
e-value: 3.6E-19
score: 69.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061874-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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