TCONS_00061874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061874
Unique NameTCONS_00061874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1752

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061874 ID=TCONS_00061874|Name=TCONS_00061874|organism=Clytia hemisphaerica|type=transcript|length=1752bp
GTTTAGTTAaagaataaaataagaaataaaaaatggctgatTTGAGTGCG
CGAAGACAAATTTCAGAAAGTCTGAGGACACAGTCCTGGCAACAAGTTTC
GATTCCCAAGGATGACACCACTATCGATAGAGGACAAGATTTGGTATTGA
AGTATTACTTTGATCGATTACGTCACTCGTATGACATCATTGTATATGAT
ggtaaaacattacgtcatgagtCGGTAGCAAACGAAGAAGACTTCTTAGC
CAAAAATAAACTTTTCAACCCGAATTTGGAAGCAGAATCCACATCGATAC
TCAACGAGTTGTCCTATTGTCTCCAACAATGTCAAAAAGAATTGACTGGG
CTGTCGTTCCAAGTTGAGGAGGACGTCTTAAAGATGAACATCAAAACCAA
ACTAAAATCAGGAATCCCTTTTGCGTGGACATTCACACTGAAAGAAGCCA
CTACTCACATGATTATAGAGCATTTGGTACAACCATTGGCAATCTTGACC
TCCGAACTCAATCGAAGGCAACAAGAATTGTTTTATATGTTGGAAAGGAA
AGATAGAGAGCTTCAAGATTATAAAGACCAAGGGGCGGTTGCCAGTAGAC
GTCATCTGGAAACAGTGCAATTCGATCGAGTCAATTTCCAAACTTCATCG
AACGTACACCAGACTTTTCTGGATTCGTGTACCAACCCAACGTTGAATAG
TTTAACGAaagatttgaaagatcttcacaGAAATGTTGTTCTTAATACTG
CATCAAAGGTTCTACCAGCCGAAGCGGCGCCCCGTGAGCAGCAAAAGGCA
GGGCCTAGTATGTCAACATTCGACACCGTTCCCATTGTTCCTGGTCGTGG
TGAAGACATCTCATCTTGGGTTAACGAGAAGCGTATTGGAGGTTCTTTTG
TTCAAGATCAACTCGATGCTGGCAAAGATCCTCTACAACCTGACCCAGAT
ACTCAGCCTGTTGTCGTCACTGAAGCTCTTTCTCCACAGGAGGAAGAGCT
GAAACGTCGAGAAGCTTTAAAGAAGAAGTTGAATGAACAAACTGAGAAGA
AAGccaagaagaaaagaaaaatcaaattgtgAGAAACAACAAATTCTCCA
AATGTTGCATGCGAAAACCGTCATCAGGACAGTAAGTTTAGTTCTCAATC
AAGGAGGATTTCATTGAAAAGCTCAGTtcgaattatcaaaaagcaactAC
AAACGAAGCAAGCGTAAAGCGACCTAACTCGACCACACCAGGATGATTAT
GAAGATTCAAAACACTtagaaagaaattcaaactttcCCTTTTTCACTGT
TTTAAATTGCACAACACATGTATGTCACACACTATGGTACAAACTGCGGC
TGTAATATCTATTTAAAGTTTCGAActacattttcaaaacaaagaagaTC
ACCAttggtttatataccaaatAAACTATTCAGATCCTAGGAATGCTGCA
ATATATCGACTTAACGGACTGAACTGTATAATGGAAGAGCCATAAACTCT
TGTTATTACCATAAAGAAACATTAACATCGAATGAGTTTACTAATAAAGT
GCCCCTCCAAAAACTATGCGATCTAACACCGATCTAGCATTGATTTCACA
TGAAGAATTTCAATAACCTTCCCAGGTATGCTATCCTAATCGTCTCcatt
tattttcatatttatgCATATACACTGTTCTTGGATCTTGTACATTTTGC
GATCTGGATTTTAAAGGATAATATAAAAGTGATTTACTCAGTCTAATAGG
AA
Run BLAST on NCBI

protein sequence of TCONS_00061874-protein

>TCONS_00061874-protein ID=TCONS_00061874-protein|Name=TCONS_00061874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MADLSARRQISESLRTQSWQQVSIPKDDTTIDRGQDLVLKYYFDRLRHSY
DIIVYDGKTLRHESVANEEDFLAKNKLFNPNLEAESTSILNELSYCLQQC
QKELTGLSFQVEEDVLKMNIKTKLKSGIPFAWTFTLKEATTHMIIEHLVQ
PLAILTSELNRRQQELFYMLERKDRELQDYKDQGAVASRRHLETVQFDRV
NFQTSSNVHQTFLDSCTNPTLNSLTKDLKDLHRNVVLNTASKVLPAEAAP
REQQKAGPSMSTFDTVPIVPGRGEDISSWVNEKRIGGSFVQDQLDAGKDP
LQPDPDTQPVVVTEALSPQEEELKRREALKKKLNEQTEKKAKKKRKIKL
Run BLAST on NCBI

transcript from alignment at scaffold_361:347380..352295+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061874 ID=TCONS_00061874|Name=TCONS_00061874|organism=Clytia hemisphaerica|type=transcript|length=4916bp|location=Sequence derived from alignment at scaffold_361:347380..352295+ (Clytia hemisphaerica)
GTTTAGTTAaagaataaaataagaaataaaaaatggctgatTTGAGTGCG
CGAAGACAAATTTCAGAAAGTCTGAGGACACAGTCCTGGCAACAAGTTTC
GATTCCCAAGGATGACACCACTATCGATAGAGGACAAGATTTGGTATTGA
AGTATTACTTTGATCGATTACGTCACTCGTATGACATCATTGTATATGAT
ggtaaaacattacgtcatgagtCGGTAGCAAACGAAGAAGACTTCTTAGC
CAAAAATAAAGTAAGTGACAACCTATATTCAAAGGCTGGGTCTTCCTTTA
CACAGTACCCATAGCCCTTGAtcaaaatttgttcttaaagtcTTGAATGA
TGAAAGTTTAAGCCAGAGTAGTCAATGAGTTCCATTGTAATGTAGCTTTT
ATGTGAGGACTAGCCAGCTAGAACAGTGCTTTTGTTCACgatgaaaatga
aagtctttTTAGCGTTCCATAACACCTTGGTATCATTGATTTGACCAAGT
ATTTTTAAAGTATCTTTACGTAAACTATACACATCGTCATCTCAACtttc
ttttctaaaaattctaaaaattagaTTTGTTTTTTGTAGCTTTTCAACCC
GAATTTGGAAGCAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTC
TCCAACAATGTCAAAAAGAATTGACTGGGCTGTCGTTCCAAGTAAATCTT
GTGATTTTCATTCATAGCTTCAATAACAGAATGCAATAAATGATCAAATA
GAGACGATTTTTTACATGGGTAGCCTAGTAATCTAGGACCTTTAgccttt
cgattgttttcacatCTGCCAGCGTTCCTTAGAATCAAAGATTTaatata
cactggataaacaagtaacagatttttgccgatttctcgtgtactagcta
tgtccgcagtaatgatattattgttcactctccttcccccattaaatgtt
ttttcgaagcatttttattgcatttcttatcgaaaaccaCTCATCCAAAT
CCCAAAagacacttaaaactttcctgtgagagtcggattcttccacttaa
ttgataattataagtcgttatgacgtttcaagctgtgagaaagatgcaaa
agacgtgttgtgtataagaaattgaatgttgacaccggaaattttcaaac
ttcaacctaaaaaaaaccaccttgtCACCAGGTGCCTCCataggattttc
ataccacagtggagccaagacactcaagtcttatgtatggtAATTTCAGC
TCTattggggacagtcttggaaagacatttccaattgaaaatttcgtgtc
actataagcattttgtctgaatttcttgtctaattatgattttctcacac
cagatttcacagatgtatccagcttggtatgctagccttactttcaagct
ttttttctgcaaatgtacaaaaagaaagagctagagaactttttgaaaat
aagacagataaacatttttttaaatcagacatcttcgagccgccatgaca
gttgtcctttgcggacaaagcttgaacatcaattgttttctgaaacaatg
aaaatacaatgatcgctctccatcgttttataagtcgtttatccagtgta
taataaatccttgttAGAATTAAGGAGAGATAAAAGTATACCTATAATCG
GATGAGCAAAACCTCCAATTTATTTGACTTAAGCTACAAAGTTGAGATAT
GGCACTTTGAAATCCCACCAAAATTAGTATTGCAGTAGGGGCTGTTCATA
TGGAGGCGGGCTGACTCGGCTAGGTGAGTTGGGATGTACTACGAAAATTT
ATCCAAATTCACCTAGATTTTCGAACATCAAGTGATCTATTTTTAGCCAT
CTTTTTCGTAGAAAACTGTGAAAGTACATGTGGGATGTCACCTAGCCGAG
CCATCCAGCCTCCATATAAACAACTCCTTTCACGGTTACATCAAATGTTT
TTTAGCTAAGAGTAACagtaaaaaatatataacttGCTTGTCTCGAATTT
GGAAGGATATTGAAACAAAAGATTTAGAGTTTTTGCTCGTGGTGCCGGCA
TCAACAGGCTAAAAATGTCAAACGAAGTAATTATAATTTagatatataaa
ataaaaaagataaatatttttcactAGGTTGAGGAGGACGTCTTAAAGAT
GAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACATTCA
CACTGAAAGAAGCCACTACTCACATGGTAAGAAGATGATAAAAAAGACTT
TACTTACTTGTCATATCTGCAGGCTAAGTTCTACTTTTATTAGGATATTA
GTGTGTCCATCAGAATGAGGAAACATGGTACTCTTTTTTATCTCCATTAC
CATTCGCTTGGATGAGAGATTTCTACCTGCCTGAAAGGCCCATTTTATTT
CCAAATAAATAAGAAAGCATACTTTCTTTCATCCCAGACGTTCGAAATCT
CGCTATTCTTTTTTTTACAGTTTGACCGGAAAATTAATATAAAatccaat
ttcaaaaaaattctgataatttttggcacgttttagaaaaaaacaaaaac
ttcaaattcgCCTTTCCTTATTTCGTATTACCATTTCAGCAAACATAAAT
TTTCGACTTAAAAAGTCGTCGTAAATAAGTCTCTTGTTTCACAGATTATA
GAGCATTTGGTACAACCATTGGCAATCTTGACCTCCGAACTCAATCGAAG
GCAACAAGAATTGTTTTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAG
ATTATAAAGACCAAGGGGCGGTTGCCAGTAGACGTAAGAAAGATTTTTCC
GGTGATTTTTTTAACTGCAGTTTGTTGGTGAACTGATAACATAAattaat
ttttgttgaaaaaagttattttagCAGTTGTTGCAAAAAGGCCACAGGTC
GAAATATTCAAGAGAAATATGATGTGTTTTTTCTGACTCTTTGATTTCAG
CTTTAGTTTAGCTTTAACTTGGTTAGGTTTTCACTCTGTCTTTGAGGTCA
ACCTAATGAATATACACTATTAATTTCCATGAAATCTTTTTAGGTCATCT
GGAAACAGTGCAATTCGATCGAGTCAATTTCCAAACTTCATCGAACGTAC
ACCAGGTACCGTAATATATCATATCCGCAATCTTCATTATAGATTgctta
aagattaaaaaaaaaaacaaaaaaaaacaaggattGAAATATCGATTTTA
TCCCTACaaaatttgtttcttttcaatcaTAGACTTTTCTGGATTCGTGT
ACCAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaG
AAATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGgtaaat
atttgattttttgtaacCTTAATAATGCTTCACTGAACTCTCGAATATAC
GATTCTTCAATGAACCGCTCCTTTGTAAATTGAATTTgtttgaagaaatt
caaagaatttctgtccaactttcttctttcaagaaatttggatggcagag
cagcatatgcatttcgttcTTATTAGGACGtctttattatattatatata
ttgaGTTTGGAAAAATCTTGCCCTTTTATGAGCTGGTGTTATTTTTTTGC
CCTTCTCTACTAtacttttgcatttttcaagAAGAAGTGTGAATGATGCA
GGTCGTCTATTTTTATTAGCGGCGCCCCGTGAGCAGCAAAAGGCAGGGCC
TAGTATGTCAACATTCGACACCGTTCCCATTGTTCCTGGTCGTGGTGAAG
ACATCTCATCTTGGGTTAACGAGAAGCGTATTGGAGGTTCTTTTGTTCAA
GATCAACTCGATGCTGGCAAAGATCCTCTACAACCTGACCCAGATACTCA
GCCTGTTGTCGTCACTGAAGCTCTTTCTCCACAGGTGCTCCTTTCATCTT
TCCGACGAATTAATTGGTCAATTCTCGTCCTGTAGTCCACCATTGCTGTT
CAAAATGAGGAAATCTATCTTTGATAATGATCAAACTAGGTAGATATTTT
CGCCTGTTAGAATCAAACATTTCTTGTGTCAAACTTTCGTTGTCctgtta
tattttattgttttcctTACGCCCGGCTGGGTTATTACTTGCCCATCAAA
AGATTCCTTGCCGCTTTTCTGAAATggttaaatattttctttcacttCCA
CAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGAATGA
ACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgAGAAA
CAACAAATTCTCCAAATGTTGCATGCGAAAACCGTCATCAGGACAGTAAG
TTTAGTTCTCAATCAAGGAGGATTTCATTGAAAAGCTCAGTtcgaattat
caaaaagcaactACAAACGAAGCAAGCGTAAAGCGACCTAACTCGACCAC
ACCAGGATGATTATGAAGATTCAAAACACTtagaaagaaattcaaacttt
cCCTTTTTCACTGTTTTAAATTGCACAACACATGTATGTCACACACTATG
GTACAAACTGCGGCTGTAATATCTATTTAAAGTTTCGAActacattttca
aaacaaagaagaTCACCAttggtttatataccaaatAAACTATTCAGATC
CTAGGAATGCTGCAATATATCGACTTAACGGACTGAACTGTATAATGGAA
GAGCCATAAACTCTTGTTATTACCATAAAGAAACATTAACATCGAATGAG
TTTACTAATAAAGTGCCCCTCCAAAAACTATGCGATCTAACACCGATCTA
GCATTGATTTCACATGAAGAATTTCAATAACCTTCCCAGGTATGCTATCC
TAATCGTCTCcatttattttcatatttatgCATATACACTGTTCTTGGAT
CTTGTACATTTTGCGATCTGGATTTTAAAGGATAATATAAAAGTGATTTA
CTCAGTCTAATAGGAA

Coding sequence (CDS) from alignment at scaffold_361:347380..352295+

>TCONS_00061874 ID=TCONS_00061874|Name=TCONS_00061874|organism=Clytia hemisphaerica|type=CDS|length=8400bp|location=Sequence derived from alignment at scaffold_361:347380..352295+ (Clytia hemisphaerica)
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
atggctgatTTGAGTGCGCGAAGACAAATTTCAGAAAGTCTGAGGACACA
GTCCTGGCAACAAGTTTCGATTCCCAAGGATGACACCACTATCGATAGAG
GACAAGATTTGGTATTGAAGTATTACTTTGATCGATTACGTCACTCGTAT
GACATCATTGTATATGATggtaaaacattacgtcatgagtCGGTAGCAAA
CGAAGAAGACTTCTTAGCCAAAAATAAACTTTTCAACCCGAATTTGGAAG
CAGAATCCACATCGATACTCAACGAGTTGTCCTATTGTCTCCAACAATGT
CAAAAAGAATTGACTGGGCTGTCGTTCCAAGTTGAGGAGGACGTCTTAAA
GATGAACATCAAAACCAAACTAAAATCAGGAATCCCTTTTGCGTGGACAT
TCACACTGAAAGAAGCCACTACTCACATGATTATAGAGCATTTGGTACAA
CCATTGGCAATCTTGACCTCCGAACTCAATCGAAGGCAACAAGAATTGTT
TTATATGTTGGAAAGGAAAGATAGAGAGCTTCAAGATTATAAAGACCAAG
GGGCGGTTGCCAGTAGACGTCATCTGGAAACAGTGCAATTCGATCGAGTC
AATTTCCAAACTTCATCGAACGTACACCAGACTTTTCTGGATTCGTGTAC
CAACCCAACGTTGAATAGTTTAACGAaagatttgaaagatcttcacaGAA
ATGTTGTTCTTAATACTGCATCAAAGGTTCTACCAGCCGAAGCGGCGCCC
CGTGAGCAGCAAAAGGCAGGGCCTAGTATGTCAACATTCGACACCGTTCC
CATTGTTCCTGGTCGTGGTGAAGACATCTCATCTTGGGTTAACGAGAAGC
GTATTGGAGGTTCTTTTGTTCAAGATCAACTCGATGCTGGCAAAGATCCT
CTACAACCTGACCCAGATACTCAGCCTGTTGTCGTCACTGAAGCTCTTTC
TCCACAGGAGGAAGAGCTGAAACGTCGAGAAGCTTTAAAGAAGAAGTTGA
ATGAACAAACTGAGAAGAAAGccaagaagaaaagaaaaatcaaattgtgA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038807XLOC_038807Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061874-exon-scaffold_361-1491911889:347380..347639TCONS_00061874-exon-scaffold_361-1491911889:347380..347639Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:347380..347639TCONS_00061874-exon-scaffold_361-1510915933:347380..347639Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:347380..347639TCONS_00061874-exon-scaffold_361-1575043694:347380..347639Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:347969..348070TCONS_00061874-exon-scaffold_361-1491911889:347969..348070Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:347969..348070TCONS_00061874-exon-scaffold_361-1510915933:347969..348070Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:347969..348070TCONS_00061874-exon-scaffold_361-1575043694:347969..348070Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:349507..349605TCONS_00061874-exon-scaffold_361-1491911889:349507..349605Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:349507..349605TCONS_00061874-exon-scaffold_361-1510915933:349507..349605Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:349507..349605TCONS_00061874-exon-scaffold_361-1575043694:349507..349605Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:350024..350162TCONS_00061874-exon-scaffold_361-1491911889:350024..350162Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:350024..350162TCONS_00061874-exon-scaffold_361-1510915933:350024..350162Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:350024..350162TCONS_00061874-exon-scaffold_361-1575043694:350024..350162Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:350423..350484TCONS_00061874-exon-scaffold_361-1491911889:350423..350484Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:350423..350484TCONS_00061874-exon-scaffold_361-1510915933:350423..350484Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:350423..350484TCONS_00061874-exon-scaffold_361-1575043694:350423..350484Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:350612..350723TCONS_00061874-exon-scaffold_361-1491911889:350612..350723Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:350612..350723TCONS_00061874-exon-scaffold_361-1510915933:350612..350723Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:350612..350723TCONS_00061874-exon-scaffold_361-1575043694:350612..350723Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:351049..351263TCONS_00061874-exon-scaffold_361-1491911889:351049..351263Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:351049..351263TCONS_00061874-exon-scaffold_361-1510915933:351049..351263Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:351049..351263TCONS_00061874-exon-scaffold_361-1575043694:351049..351263Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1491911889:351533..352295TCONS_00061874-exon-scaffold_361-1491911889:351533..352295Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1510915933:351533..352295TCONS_00061874-exon-scaffold_361-1510915933:351533..352295Clytia hemisphaericaexon
TCONS_00061874-exon-scaffold_361-1575043694:351533..352295TCONS_00061874-exon-scaffold_361-1575043694:351533..352295Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061874-proteinTCONS_00061874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:347380..352295 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.78321	8.13901	6.61251	4.58455	0.0470787	1.29189	1.58474	2.26693	2.14524	1.78234	1.58404	0.981417	1.46673	2.17428	2.71565	3.1525	3.81458	4.06904	1.58871	1.86709	2.7566	2.96023	7.02059	6.87875	2.14666	1.39198	0.630551	0.481313	4.49154	4.78418
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015381XLF_fam
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006302 double-strand break repair
cellular_component GO:0005634 nucleus
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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