TCONS_00061102-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061102-protein
Unique NameTCONS_00061102-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length361

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061102-protein ID=TCONS_00061102-protein|Name=TCONS_00061102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MYIAAAGTHQIWSYFLEDGSWLKKGSQTERTCIRFAGSGNEENRNNSYPH
KASFAQPSHLSLGKVKGQNVLFVADSESSSVRTVELKSGAVKACVGGERD
PMNLFAYGDQDGKSVDAKLQHPLAVVYDQQDDVVYVADSYNHKIKKIEAS
KNTCSTLTIRGGVGSTDGQMAECQFNEPGGLALHPHKRLLYVADTNNHRI
RVIDLEKNTCTTLPLIESDSKDSPVPLEFKALVNIQRNPPTVLEKITRDL
SSVVSARVQLVFPEHLHFTEGVNSKVQLSLSDMDGEVISFESGEIEREKK
TFGCNLSTHHANKDLLLKVEMILYVCIGESCMMKSYVIQQHVTHDVTTTN
DIIEIEHQVVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038337XLOC_038337Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061102TCONS_00061102Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001258NHL_repeat
IPR0110426-blade_b-propeller_TolB-like
IPR013017NHL_repeat_subgr
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001258NHL repeatPFAMPF01436NHLcoord: 175..202
e-value: 2.1E-5
score: 24.2
coord: 119..146
e-value: 6.6E-5
score: 22.6
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1..248
e-value: 3.5E-16
score: 58.8
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 119..150
score: 7.319
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 174..206
score: 9.231
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 2..215

Blast
[Close]
BLAST of TCONS_00061102-protein vs. Swiss-Prot (Human)
Match: NHLC2 (NHL repeat-containing protein 2 OS=Homo sapiens GN=NHLRC2 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 3.902e-92
Identity = 163/373 (43.70%), Postives = 225/373 (60.32%), Query Frame = 0 
Query:    1 MYIAAAGTHQIWSYFLEDGSWLKKGSQTERTCIRFAGSGNEENRNNSYPHKASFAQPSHLSLGKVKGQNVLFVADSESSSVRTVELKSGAVKACVGGERDPMNLFAYGDQDGKSVDAKLQHPLAVVYDQQDDVVYVADSYNHKIKKIEASKNTCSTLTIRGGVGS-TDGQMAECQFNEPGGLALHPHKRLLYVADTNNHRIRVIDLEKNTCTTLPLIESDSK--DSPVPLEF-KALVNIQRNPPTV-LEKITRDLSSVVSARVQLVFPEHLHFTEGVNSKVQLSLSD----MDGEVISFESGEIER--EKKTFGCNLSTHHANKDLLLKVEMILYVCIGES--CMMKSYVIQQHVTHDVTTTNDIIEIEHQVV 360
            ++IA AGTHQIW+  L+ G   KK   T+ TC+RFAGSGNEENRNN+YPHKA FAQPS LSL      + LFVADSESS+VRTV LK GAVK  VGGERDPMNLFA+GD DG  ++AKLQHPL V +D++ +++YVADSYNHKIK ++     C+TL   G   + T     E  FNEPGGL +  +  LLYVADTNNH+I+V+DLE    + LP+  S++   D P  +E  K L  + ++ P++ L  +T      +  +++L  P     TEGV+S   L+       + G++    +G+IE    + T    +     + + ++ V + LY C  +S  CMMK+ +  Q +    T    I  +E + V
Sbjct:  356 LWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQI---AAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPVELRYV 725
The following BLAST results are available for this feature:
BLAST of TCONS_00061102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NHLC23.902e-9243.70NHL repeat-containing protein 2 OS=Homo sapiens GN... [more]
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