TCONS_00060913-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060913-protein
Unique NameTCONS_00060913-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060913-protein ID=TCONS_00060913-protein|Name=TCONS_00060913-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MASKVDLFTSCRKIVGAAFAFKGPNPPPPNPVIFLKAPTSLLPQGEFIRI
PEGCDTINHEVELGVVIGKGGSSIPENQVMDHIEGYVLALDMTSTSHFKE
ALDEKKPWLLAKCFDTFCPISEILSKSEVPDPDNVDLWLTVNGEDRQAAN
TKDLNFSISQLISYTSKITKLERGDLILTGTPGGISTVKSGDIIDCGFKG
IKSMKFEVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038243XLOC_038243Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060913TCONS_00060913Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011234Fumarylacetoacetase_C-rel
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011234Fumarylacetoacetase, C-terminal-relatedPFAMPF01557FAA_hydrolasecoord: 24..208
e-value: 7.0E-51
score: 172.9
IPR011234Fumarylacetoacetase, C-terminal-relatedGENE3D3.90.850.10coord: 8..209
e-value: 3.1E-63
score: 212.6
IPR011234Fumarylacetoacetase, C-terminal-relatedSUPERFAMILY56529FAHcoord: 24..208

Blast
[Close]
BLAST of TCONS_00060913-protein vs. Swiss-Prot (Human)
Match: FAHD1 (Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens GN=FAHD1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.187e-53
Identity = 84/180 (46.67%), Postives = 111/180 (61.67%), Query Frame = 0 
Query:   30 NPVIFLKAPTSLLPQGEFIRIPEGCDTINHEVELGVVIGKGGSSIPENQVMDHIEGYVLALDMTSTSHFKEALDEKKPWLLAKCFDTFCPISEILSKSEVPDPDNVDLWLTVNGEDRQAANTKDLNFSISQLISYTSKITKLERGDLILTGTPGGISTVKSGDIIDCGFKGIKSMKFEVK 209
             PV+FLK  T+  P+G  I +P     ++HE+ELGVV+GK   ++PE   MD++ GY L LDMT+     E   +  PW LAK F   CP+S  + K ++PDP  + LWL VNGE RQ   T  + FSI  +ISY SKI  LE GD+ILTGTP G+  VK  D I+ G  G+ SM F+V+
Sbjct:   41 EPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVE 220
The following BLAST results are available for this feature:
BLAST of TCONS_00060913-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAHD13.187e-5346.67Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens ... [more]
back to top