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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060897-protein ID=TCONS_00060897-protein|Name=TCONS_00060897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MNSNRTNGSSCDCPKGMIRVNATTCEKCRPGYYASAGWPECRRCGEEKVL
SADRSTCIYCPPGFFKRRWRNECKPCAHGTIVDRWSKFNCEECPFDSFSV
NGTKCQKCPLGTYIRRYDTNECKPCYWGTNVNKNKTASCDCPAGMYRRNA
TTCLKCRHGHYSEKGEFVWCKKCNSGSIHSPNQTMCIDCPKGTYEVNRQV
CKSCPFGTYSSWKGSSKCYSCKQGTIGENGTCCEPCPPGSYGYKNQCVKC
PPGTEVERVSYSDVGGICIKCIYGTVSSDGTSCRNCPKGTFKVNGTTCQK
CPLGTYTFKE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011641 | Tyr-kin_ephrin_A/B_rcpt-like |
| IPR009030 | Growth_fac_rcpt_ |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 16..57
e-value: 0.81
score: 17.8
coord: 63..108
e-value: 0.13
score: 21.3
coord: 274..310
e-value: 2.6
score: 13.2
coord: 111..156
e-value: 7.5
score: 9.1
coord: 224..264
e-value: 1.0
score: 16.9
coord: 176..221
e-value: 9.5E-7
score: 38.4 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 278..288
e-value: 0.052
score: 13.0 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 182..206
e-value: 2.1E-5
score: 24.0
coord: 160..181
e-value: 1.4E-4
score: 21.4
coord: 289..310
e-value: 1.2E-5
score: 24.8 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 13..58
e-value: 3.6E-6
score: 26.7
coord: 102..139
e-value: 6.0E-7
score: 29.2 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 232..246
e-value: 0.0018
score: 17.7
coord: 81..101
e-value: 0.037
score: 13.5
coord: 59..80
e-value: 3.2E-6
score: 26.5
coord: 140..159
e-value: 8.5E-4
score: 18.8
coord: 207..231
e-value: 0.021
score: 14.3 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 247..277
e-value: 5.7E-4
score: 19.7 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 54..176 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 183..304 |
Blast
The following BLAST results are available for this feature:
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