TCONS_00060431-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060431-protein
Unique NameTCONS_00060431-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length588

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060431-protein ID=TCONS_00060431-protein|Name=TCONS_00060431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=588bp
MSSRALRSKAKIKVIPTRSYSASLRGSKQREPFLSLDSSKKTTPNKEKTT
RGTRGRPPKKQVPSPKAEKDKSSNEQDDTITEAENIDFQVIKKEPDVKEE
PQSKVVDNESNNVQEVTQRNHENEDSNQDENHTHEGTVSEEQAHEGTVSE
EQAHEGTVNEEEPSKSSPKELTIVPPLKRKRGRPRKTEFLQTDTVENIAK
KLKTERDPTPPVVIKEEQKPISPEPPRRKPRMASLNALAKVNAVLDIYRF
EKLKDIIDEQSSYVDTVDIKKEKEMKSNNKKQEKTDKIDVKIESKTVCET
REMKAEEVTVIEDEEEEDEEVFVCPSPDPPTPPPEMITQSIQTENIHHCK
SVQTERVIFVDDHSTVKTLCTCYASNKKNELKHQHVKTNFTESGFPIHIR
STVLAHTPSYTVALPIVKTHKCPKTENTHNLTNIGGITANVTSMLDRCIS
RTLFQHNYYPECTKLAQMSAQKEAIEKKKRLAELAQQRIDQKKNAQRLVI
PSLHCEPISISIPTSDNYQKDITNKQVAKKSYKKKTKEKAQVQEPVKKQE
SIDTDEKADDHGWRFEGAHREENTNVVMTKYQSVLLKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038003XLOC_038003Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060431TCONS_00060431Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 465..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..231
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 178..190
e-value: 0.14
score: 20.0
coord: 51..63
e-value: 32.0
score: 6.7
IPR017956AT hook, DNA-binding motifPFAMPF02178AT_hookcoord: 53..62
e-value: 1.9
score: 8.6
coord: 178..188
e-value: 0.0097
score: 15.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060431-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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