TCONS_00057660-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057660-protein
Unique NameTCONS_00057660-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057660-protein ID=TCONS_00057660-protein|Name=TCONS_00057660-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MAYSIFTRDDIADFKEVFEYFDKRNRGHITRKQMVTTLRSLIPKPKENDI
TCLMENISFKNTVNFREYLDILHATIESNRKKQIHDKKPRRKRSHYTNLT
QDQLNDIRDTFTLFDRDGDGTISVHELQDMMTSLGQRVSEADIKEMLEDT
DTSADGTLDYPAFMSMMTRKSANNDLNCEIKEAFKFFDQDGDGTITKEEL
KICMKRIGEDLSDEDLNEMLNEADLDGNGKIEFHEFAKLITWPKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036368XLOC_036368Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057660TCONS_00057660Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 142..170
e-value: 0.1
score: 21.7
coord: 13..41
e-value: 8.5
score: 10.3
coord: 106..134
e-value: 5.3E-7
score: 39.3
coord: 215..243
e-value: 0.0073
score: 25.5
coord: 179..207
e-value: 1.4E-8
score: 44.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 179..240
e-value: 2.0E-14
score: 53.7
coord: 105..167
e-value: 8.8E-9
score: 35.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 9.213
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 9..44
score: 10.413
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 211..245
score: 10.552
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 179..210
score: 15.183
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 102..137
score: 15.601
IPR002048EF-hand domainCDDcd00051EFhcoord: 179..241
e-value: 1.2178E-20
score: 81.8253
IPR002048EF-hand domainCDDcd00051EFhcoord: 106..168
e-value: 8.73491E-14
score: 62.5653
NoneNo IPR availableGENE3D1.10.238.10coord: 156..193
e-value: 5.3E-17
score: 60.9
NoneNo IPR availableGENE3D1.10.238.10coord: 194..240
e-value: 1.8E-20
score: 72.4
NoneNo IPR availableGENE3D1.10.238.10coord: 7..93
e-value: 6.3E-10
score: 38.5
NoneNo IPR availableGENE3D1.10.238.10coord: 132..155
e-value: 5.2E-13
score: 48.4
NoneNo IPR availableGENE3D1.10.238.10coord: 95..131
e-value: 5.1E-17
score: 61.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 188..200
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 224..236
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 115..127
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 6..76
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 93..241

Blast
[Close]
BLAST of TCONS_00057660-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.510e-44
Identity = 64/143 (44.76%), Postives = 107/143 (74.83%), Query Frame = 0 
Query:   99 LTQDQLNDIRDTFTLFDRDGDGTISVHELQDMMTSLGQRVSEADIKEMLEDTDTSADGTLDYPAFMSMMTRKSANNDLNCEIKEAFKFFDQDGDGTITKEELKICMKRIGEDLSDEDLNEMLNEADLDGNGKIEFHEFAKLIT 241
            LT++Q+ + ++ F+LFD+DGDGTI+  EL  +M SLGQ  +EA++++M+ + D   +GT+D+P F++MM RK  + D   EI+EAF+ FD+DG+G I+  EL+  M  +GE L+DE+++EM+ EAD+DG+G++ + EF +++T
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147

HSP 2 Score: 93.2041 bits (230), Expect = 6.917e-24
Identity = 54/167 (32.34%), Postives = 91/167 (54.49%), Query Frame = 0 
Query:    6 FTRDDIADFKEVFEYFDKRNRGHITRKQMVTTLRSLIPKPKENDITCLMENISF--KNTVNFREYLDILHATIESNRKKQIHDKKPRRKRSHYTNLTQDQLNDIRDTFTLFDRDGDGTISVHELQDMMTSLGQRVSEADIKEMLEDTDTSADGTLDYPAFMSMMTRK 170
             T + IA+FKE F  FDK   G IT K++ T +RSL   P E ++  ++  +      T++F E+L ++       RK +  D +                 +IR+ F +FD+DG+G IS  EL+ +MT+LG+++++ ++ EM+ + D   DG ++Y  F+ MMT K
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA------RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of TCONS_00057660-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.510e-4444.76Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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