TCONS_00057307-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057307-protein
Unique NameTCONS_00057307-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057307-protein ID=TCONS_00057307-protein|Name=TCONS_00057307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MDDISMVVLLLALIVLFFLARGLVGLKLFQRCVFLSKKNGQRPNLIVISK
SEDVTNSKKYIFDNAIKTYQLPLKFLVILPKPSVNTVFTMYIGKPIEDKT
QPYNKLCPLCLDELNTMTTNCFTVNCGHSYHQVCAVNLFLKETKTCPLCK
QGIEKRVKKVFGKETKIDTLAKFYGSTISTTLNSEADLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036112XLOC_036112Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057307TCONS_00057307Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 107..149
e-value: 1.9E-5
score: 34.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 107..150
e-value: 2.7E-8
score: 33.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 107..150
score: 11.486
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 107..153
e-value: 1.85025E-8
score: 47.0552
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 93..185
e-value: 2.0E-12
score: 46.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 98..155

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057307-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top