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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00056916-protein ID=TCONS_00056916-protein|Name=TCONS_00056916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
MDTTFRPFKGDGHRRLHPTQLLALTNTLLPRDGRRTPPPPRQRMEDQEIK
RSFDLAIGLIVALLNVAEIIMILRIRRKKKIFELVLLSLSFSDLLFGLSN
GAICVVFLGNWRNEEVLEVTTSIYFLFILCSIFHLVFIALDRLWAIVRPI
KHNIFMTRKKVYIILSTIWMLGIVVTLALYYTNDEGYLFQDQYEFELVED
EDDNHNTTTALTNTTLTPLSTVTTAPPITIHHITSNLTDGGRNRTNRPRT
TRQPPSKKPPQFRKKLLADKIQVFKKFMRLLLSGFILGADILLILIYSLI
MYRVRLAKKKAKLQHQQKTSHNKVNLVCVFVAGSFIMFTVPYALNRIITG
EGQFWVNVILVSNSGMNSIIYFFRNRCEEEVQKQRKKEGVSSSSGLTPAT
TPLSSRHHINLADSVDTTPVGTPKQERIIMKKI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 353..379
score: 21.25
coord: 82..103
score: 26.64
coord: 124..146
score: 32.02
coord: 160..181
score: 14.11
coord: 324..348
score: 18.43 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 65..345
e-value: 7.0E-16
score: 58.2 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 46..386
e-value: 3.3E-36
score: 124.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 384..421 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 235..261 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 51..206
coord: 276..376 |
| IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 64..348
score: 20.452 |
Blast
The following BLAST results are available for this feature:
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