TCONS_00056863-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056863-protein
Unique NameTCONS_00056863-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length864

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056863-protein ID=TCONS_00056863-protein|Name=TCONS_00056863-protein|organism=Clytia hemisphaerica|type=polypeptide|length=864bp
MYRLKLLQKGKWISSLQTSRGLQATATVLSDRVVGNKKIKDKVEVAVIGG
GCVGASITYHLARQGTKDVVLLEKSELTAGSTWHAAGLTTTFHPGINVKH
LHWYSMNFYPQLEKETGQIVGFHRPGSIRILSTNDRVNEAKYQLSRGGWH
SAYMKFMNPDEIHEMVPYMNMDGIHGGIWTPGDGHTDPYSLTQAFAIGAR
KWGAEIYLSSPVEGLTQKEDGTWDVQTPHGMINAKHVVNASGFWGREIGK
MVGVEHPLIPIHHQYLVTSTIPEVQQCKHEIPVMRDLEGSYYLRQEKQGL
VVGPYERAEKMRLQDDWWDGVPPGFGKELYESDLDRIMENVEVAMERFPC
VKDADIASVVSGPITYTPDILPMLGPMPEVHNYWCAIGFGYGVIHAGGAG
KYLADWIQNGEPTYDLNELDPGRYGKWTNREYVLAKARESYGFNNLVGFP
KEERYAGRPMRLSPFYEKLKAAGAQHTFSAGWEVPKWYAQDGDDASYKPS
YFRTNWHEPVGREIKNTMENVSVADISAFAKISIKGNGATKFLDYMVANK
LPKIGKSNVSHMLSPKGKVYAEVTVSTLSDNHYYVITGGGVEYHDIRWLQ
EHARNFSDVQITNETDDFATLSINGPKSRALLQELADSDVSENGFKFMEN
KHMKVGGIDVLALCVSYTGELGWEFYVANDQASALYDAIMDAGQKHGIGH
IGGYAINSMRLEKGFRLWGAEMNMDVNPYAAGLDFFIKLKKGDFIGRDAL
IESRKSIPTRRLVAMVVDTDNIDPEGNESIWYMGKVVGNTTSGCYSHNFG
TSICYAYVPTYLDPVGSQLEVELVGKKYKCTIVEEPFIPMEASRRRMKKT
VQQCMDEKRKEIGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035822XLOC_035822Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056863TCONS_00056863Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006222GCV_T_N
IPR013977GCV_T_C
IPR032503FAO_M
IPR006076FAD-dep_OxRdtase
IPR023753FAD/NAD-binding_dom
IPR029043GcvT/YgfZ_C
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..347
NoneNo IPR availableGENE3D3.30.1360.120coord: 607..712
e-value: 3.9E-22
score: 78.2
NoneNo IPR availableGENE3D3.30.9.10coord: 208..367
e-value: 2.3E-33
score: 114.6
NoneNo IPR availableGENE3D3.40.50.720coord: 40..133
e-value: 1.7E-5
score: 24.4
NoneNo IPR availableGENE3D3.30.1360.120coord: 460..606
e-value: 6.6E-22
score: 77.2
NoneNo IPR availableGENE3D4.10.1250.10coord: 714..755
e-value: 3.3E-15
score: 55.5
NoneNo IPR availableGENE3D3.30.9.10coord: 134..207
e-value: 1.6E-5
score: 24.4
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 258..367
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 458..754
IPR006222Glycine cleavage T-protein-like, N-terminalPFAMPF01571GCV_Tcoord: 466..736
e-value: 6.3E-72
score: 241.9
IPR013977Glycine cleavage T-protein, C-terminal barrel domainPFAMPF08669GCV_T_Ccoord: 742..834
e-value: 8.8E-19
score: 67.5
IPR013977Glycine cleavage T-protein, C-terminal barrel domainGENE3D2.40.30.110coord: 756..834
e-value: 1.2E-20
score: 72.4
IPR032503FAD dependent oxidoreductase, central domainPFAMPF16350FAO_Mcoord: 409..463
e-value: 5.2E-13
score: 49.0
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 45..406
e-value: 3.9E-56
score: 191.0
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 368..434
coord: 44..258
IPR029043Glycine cleavage T-protein/YgfZ, C-terminal domainSUPERFAMILY101790Aminomethyltransferase beta-barrel domaincoord: 760..844

Blast
[Close]
BLAST of TCONS_00056863-protein vs. Swiss-Prot (Human)
Match: M2GD (Dimethylglycine dehydrogenase, mitochondrial OS=Homo sapiens GN=DMGDH PE=1 SV=2)

HSP 1 Score: 1017.68 bits (2630), Expect = 0.000e+0
Identity = 473/814 (58.11%), Postives = 611/814 (75.06%), Query Frame = 0 
Query:   40 KDKVEVAVIGGGCVGASITYHLARQGTKDVVLLEKSELTAGSTWHAAGLTTTFHPGINVKHLHWYSMNFYPQLEKETGQIVGFHRPGSIRILSTNDRVNEAKYQLSRGGWHSAYMKFMNPDEIHEMVPYMNMDGIHGGIWTPGDGHTDPYSLTQAFAIGARKWGAEIYLSSPVEGLTQKEDGTWDVQTPHGMINAKHVVNASGFWGREIGKMVGVEHPLIPIHHQYLVTSTIPEVQQCKHEIPVMRDLEGSYYLRQEKQGLVVGPYERAEKMRLQDDW-WDGVPPGFGKELYESDLDRIMENVEVAMERFPCVKDADIASVVSGPITYTPDILPMLGPMPEVHNYWCAIGFGYGVIHAGGAGKYLADWIQNGEPTYDLNELDPGRYGKWTNREYVLAKARESYGFNNLVGFPKEERYAGRP-MRLSPFYEKLKAAGAQHTFSAGWEVPKWYAQDGDDASYKPSYFRTNWHEPVGREIKNTMENVSVADISAFAKISIKGNGATKFLDYMVANKLPKIGKSNVSHMLSPKGKVYAEVTVSTLSDNHYYVITGGGVEYHDIRWLQEHA-RNFSDVQITNETDDFATLSINGPKSRALLQELADSDVSENGFKFMENKHMKVGGIDVLALCVSYTGELGWEFYVANDQASALYDAIMDAGQKHGIGHIGGYAINSMRLEKGFRLWGAEMNMDVNPYAAGLDFFIKLKK-GDFIGRDALIESRKSIPTRRLVAMVVDTDNIDPEGNESIWYMGKVVGNTTSGCYSHNFGTSICYAYVPTYLDPVGSQLEVELVGKKYKCTIVEEPFIPMEASRRRMKK 849
            KD+ E  +IGGGCVG S+ YHLA+ G KDVVLLEKSELTAGSTWHAAGLTT FHPGIN+K +H+ S+  Y +LE+ETGQ+VGFH+PGSIR+ +T  RV+E KYQ++R GWH+     + P++I EM P +NM+ +  G++ PGDGH DPYSLT A A GARK GA +   +PV  L  + DGTWDV+TP G + A  +VNA+GFW RE+GKM+G+EHPLIP+ HQY+VTSTI EV+  K E+PV+RDLEGSYYLRQE+ GL+ GPYE  EKM++QD W  +GVPPGFGKEL+ESDLDRIME+++ AME  P +K ADI +VV+GPITY+PDILPM+GP   V NYW AIGFGYG+IHAGG GKYL+DWI +GEP +DL ELDP RYGKWT  +Y  AKARESYGFNN+VG+PKEER+AGRP  R+S  Y++L++      F AGWE P W+ + G D  Y+PS+ RTNW EPVG E K  M+ V+V D+S F K +IKG  + + LD++ AN +PK+G +N+SHML+PKG+VYAE+TVS  S   + +ITG G E HD+RW++E A +   DV+I N TD+   L + GP++R +LQ+L   D+S++ FKF++ K +KV  I V A+ +SYTGELGWE Y   + + ALYDAIM+AGQ+ GI + G YA+N++RLEK FR WG EMN D NP  AGL++F+KL K  DFIG+ AL + +     RRLV + + TD++DPEGNESIWY GKVVGNTTSG YS++   S+ +AYVP  L  VG Q+EVEL+GK Y   I++EP +  E +R R++K
Sbjct:   47 KDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRLATTPVRVDEFKYQMTRTGWHATEQYLIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTWDVETPQGSMRANRIVNAAGFWAREVGKMIGLEHPLIPVQHQYVVTSTISEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKVQDSWVTNGVPPGFGKELFESDLDRIMEHIKAAMEMVPVLKKADIINVVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRVSGLYQRLESK-CSMGFHAGWEQPHWFYKPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVIPKVGFTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYNGKVVGNTTSGSYSYSIQKSLAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLVLTEPTRNRLQK 859
The following BLAST results are available for this feature:
BLAST of TCONS_00056863-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M2GD0.000e+058.11Dimethylglycine dehydrogenase, mitochondrial OS=Ho... [more]
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