TCONS_00055766-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055766-protein
Unique NameTCONS_00055766-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length473

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055766-protein ID=TCONS_00055766-protein|Name=TCONS_00055766-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
HEFAPSSIGTTLMHDETNDNGERLIEYCLGSNLTHAQSHFPQPVSRFWTW
RHPSGTHAQLDHILISSKWRNSLRNCRAYNTVEVDSDHRILSATVKVSLR
TTKGNSLARQKYNWKKLESLEVKREFQLKLSNRFRNIPQIETITERYDAF
EKTTCEVALEVLGKRVPTGLPSWVSKETEDMRKLRDAAKKRDIISKSTVS
RRQLKDLNVSLNQSYKDDERKHLEKQLAELTEASNKKEVNKVWSIINELS
GKKCQLPSKVKKQDGTDPANQQEILKEWKEYFSALLNNRSTTPAADPTPA
EIDLPINTDPPTLNETIKAIKSLKRNKSPGLDFGITPEALLDGGDGMASI
VHDFCHEVYVNKVPPKQWITNLIIPVPKKGDLSLMNNYRGITLMSICAKV
YNKLLLNRIYDIVDRRLRPNQAGFRAGRSCAQQVHILRRIIEGCTIKQLP
LVATFIDFRKAFDSINRDSMFKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035109XLOC_035109Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055766TCONS_00055766Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR005135Endo/exonuclease/phosphatase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..240
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 373..472
e-value: 2.64839E-36
score: 132.8
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 302..472
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 376..471
e-value: 4.1E-16
score: 59.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 357..473
score: 8.814
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 5..99
e-value: 1.1E-7
score: 31.1
IPR005135Endonuclease/exonuclease/phosphataseSUPERFAMILY56219DNase I-likecoord: 17..97

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055766-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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