TCONS_00052726-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052726-protein
Unique NameTCONS_00052726-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052726-protein ID=TCONS_00052726-protein|Name=TCONS_00052726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MFSREEKEKEKENNLALIEELRRRLLSRGPELQDFDEEDIEKVQKSDGFV
WQFLIHQHKDIDKALEMMVECLKWRESFGLNEITERNIDRHLFEIGFLFP
RNTDKNGNLLLHFLANRYRKELYNIEEVKKLFAFALEKLCENNSGKKVTM
VFDMQDAGFANMDMDLIKFLITCFQTYFPNVLEYLIVFETPWILITGWKL
VKTWMNSDGISKIKFVKKNEINQFIAPKNLLCTMGGKDDYVYKYPPQLFT
AKTQNNIIEANGVSSNHLTVNQTDVFSSISLNFDDKSVIQQQQQQQQQQQ
LSDEAANKTNYSKMIPSVQTEDGEPIVTIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033330XLOC_033330Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052726TCONS_00052726Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR011074CRAL/TRIO_N_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..314
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 89..239
e-value: 5.1E-15
score: 65.9
IPR001251CRAL-TRIO lipid binding domainGENE3D3.40.525.10coord: 3..319
e-value: 1.2E-46
score: 158.6
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 98..237
e-value: 5.7E-25
score: 87.8
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 85..242
score: 12.744
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 96..237
e-value: 3.51344E-15
score: 70.1066
IPR001251CRAL-TRIO lipid binding domainSUPERFAMILY52087CRAL/TRIO domaincoord: 90..248
IPR011074CRAL/TRIO, N-terminal domainSUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 12..86

Blast
[Close]
BLAST of TCONS_00052726-protein vs. Swiss-Prot (Human)
Match: MSPD2 (Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.413e-54
Identity = 91/272 (33.46%), Postives = 155/272 (56.99%), Query Frame = 0 
Query:    8 EKEKENNLALIEELRRRLLSR--GPELQDFDEEDIEKVQKSDGFVWQFLIHQHKDIDKALEMMVECLKWRESFGLNEITERNIDRHLFEIGFLFPRNTDKNGNLLLHFLANRYRKELYNIEEVKKLFAFALEKLCENNSGKKVTMVFDMQDAGFANMDMDLIKFLITCFQTYFPNVLEYLIVFETPWILITGWKLVKTWMNSDGISKIKFVKKNEINQFIAPKNLLCTMGGKDDYVYKYPPQLFTAKTQNNIIEANGVSSNHLTVNQTDVFS 277
            E   +N   LI E RRR  +     +   +D  D+E++Q+ D +V  +L  +H  +D+ L+M+ E  +WR+   +N++ E +I R L EIG ++    DK GN L       + K+   I + KKL AF LE+  +  +GK VT++FD+ + G  ++DMD ++F+I CF+ Y+P  L  +++F+ PW++   +K+VKTW+  + +S +KF  KNE+  +++ + L   MGG D + Y YPP L     Q  + E   ++S   T ++ D+ S
Sbjct:    3 ENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQKTILDKKKLIAFWLERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYSYPP-LVDDDFQTPLCENGPITSEDETSSKEDIES 273
The following BLAST results are available for this feature:
BLAST of TCONS_00052726-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSPD21.413e-5433.46Motile sperm domain-containing protein 2 OS=Homo s... [more]
back to top