TCONS_00052384-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052384-protein
Unique NameTCONS_00052384-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length227

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052384-protein ID=TCONS_00052384-protein|Name=TCONS_00052384-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
MQKPSSGSGRFRASEGDWVCSKEDCENVNFARRDKCNKCGRAKGSSYIVK
NAGNEIGSKFAEKSKGLFSADDWQCSKCSNINWARRTTCNVCNAPKVGPD
ENRTGFGGGFKENEGVIYNERQDDSDGEYDEFGRKKKKYRGKLPSKEEER
EEKKAVVKEQQHNYEDEEEEDDDDDEDGDLSKYNLSSSDEDDKPPPAPRI
IGRSRPSADGSSSSDKRDRSRSPISRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033115XLOC_033115Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052384TCONS_00052384Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR017337UCP037956_Znf_RanB2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 150..170
NoneNo IPR availableGENE3D4.10.1060.10coord: 8..46
e-value: 4.2E-10
score: 38.2
coord: 58..98
e-value: 4.7E-12
score: 44.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..227
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 71..95
e-value: 2.9E-7
score: 40.1
coord: 16..42
e-value: 1.1E-4
score: 31.6
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 69..96
e-value: 8.7E-8
score: 31.3
coord: 14..40
e-value: 8.4E-5
score: 21.7
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 73..92
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 18..39
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 14..45
score: 9.54
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 69..98
score: 9.823
IPR001876Zinc finger, RanBP2-typeSUPERFAMILY90209Ran binding protein zinc finger-likecoord: 7..45
IPR001876Zinc finger, RanBP2-typeSUPERFAMILY90209Ran binding protein zinc finger-likecoord: 62..98
IPR017337Uncharacterised conserved protein UCP037956, zinc finger Ran-bindingPIRSFPIRSF037956ZRANB2coord: 5..227
e-value: 8.1E-73
score: 243.5

Blast
[Close]
BLAST of TCONS_00052384-protein vs. Swiss-Prot (Human)
Match: ZRAB2 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 8.983e-48
Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0 
Query:   11 FRASEGDWVCSKEDCENVNFARRDKCNKCGRAKGS-SYIVKNAGNEIGSKFAEKSKGLFSADDWQCSKCSNINWARRTTCNVCNAPKVGPDENRTGFGGGFKENEGVIYNERQDDSDGEYDEF 132
            FR S+GDW+C  + C NVNFARR  CN+CGR K + + ++K  G EIG   AEKS+GLFSA+DWQC  CSN+NWARR+ CN+CN PK    E RTG+GGGF E E V Y ER+ +SDGEYDEF
Sbjct:    6 FRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIERE-ESDGEYDEF 127
The following BLAST results are available for this feature:
BLAST of TCONS_00052384-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZRAB28.983e-4860.98Zinc finger Ran-binding domain-containing protein ... [more]
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