TCONS_00052251-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052251-protein
Unique NameTCONS_00052251-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052251-protein ID=TCONS_00052251-protein|Name=TCONS_00052251-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MAMNGTSSTETEQIIIGISSSISIVCSFLILTTFACLREVQTLTRQIIIC
MTIADLLTALANLIGAMVIHGQFHTVSSKTVIEDDGFLSWCTIQSFVSST
SSLWSFLWTMVLSIALHYVIVKEKVDRIIKVLPWLHVLCWLLPLVVNVVA
LWKGKLGYSKDAVTGGWCWISTDVHNEAVIWMTLDGKFIEILTYFVIFYY
FVLIKKHLKKKLRKISRSSASSLTKNSNSIVDAIRLLEKKLIFLPILLIL
LRIWGTIRYLFVVFKLNTANHKGVETADRVLSYLQGVGDSSQATLNFIIF
CACTPKIRKQIFNWIHSGKCHQNSAAKTDSEEGERKTLITKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033067XLOC_033067Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052251TCONS_00052251Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000848GPCR_cAMP
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0030552cAMP binding
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0030552 cAMP binding
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000848GPCR, cAMP-typePRINTSPR00247GPCRCAMPcoord: 95..121
score: 35.8
coord: 134..152
score: 38.6
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..341
e-value: 5.5E-28
score: 97.2
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 14..324
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 13..286
e-value: 1.2E-11
score: 44.4
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 12..304
score: 17.942

Blast
[Close]
BLAST of TCONS_00052251-protein vs. Swiss-Prot (Human)
Match: GP157 (G-protein coupled receptor 157 OS=Homo sapiens GN=GPR157 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.196e-27
Identity = 72/235 (30.64%), Postives = 129/235 (54.89%), Query Frame = 0 
Query:   81 VIEDDGFLSW-CTIQSFVSSTSSLWSFLWTMVLSIALHYVIVKE-KVDRIIKVLPWLHVLCWLLPLVVNVVALWKGKLGYSKDAVTGGWCWISTDVHNEAVIWMTLDGKFIEILTYFVIFYYFVLIKKHLKKKLRKISRSSASSLTKNSNSIVDAIRLLEKKLIFLPILLILLRIWGTIRYLFVVFKLNTANHKGVETADRVLSYLQGVGDSSQATLNFIIFCACTPKIRKQIFN 313
            V+++    SW C +Q  +S+ ++  SF WT+ +++ L+  IV+  +  R  ++L   HV+ W +PLV+ V A+   K+GY    V+ GWCWI  +  +  V+WM L GK  E+L Y ++   ++L++KH+ +    +S      +    + ++    + +KKL+ +P++ I LR+W T+R     F L       V+T   VL  L G+G++ Q   N I+F  CT  +R ++F+
Sbjct:   68 VLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDH-VLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEY--RPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVR-----FVLTLCGSPAVQTP--VLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFS 292
The following BLAST results are available for this feature:
BLAST of TCONS_00052251-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1571.196e-2730.64G-protein coupled receptor 157 OS=Homo sapiens GN=... [more]
back to top