TCONS_00051386-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051386-protein
Unique NameTCONS_00051386-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length442

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051386-protein ID=TCONS_00051386-protein|Name=TCONS_00051386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MASNKQNIIQEEEMASQACAVQTDHSKCSICLMPLVNQGSSNKCHQCMAK
IDSVPNGFPFETVGPERKEFECPICLCIIKNATELPCEHLMCKECLEHYE
KEQNERAKRVGLDEAEFLCSICQTEYKIADKNAVRSTDRMIQTTLQVKCL
QKKCQWVGCIMDYEVHKINRCNFELIRCSYYDLGCLTNILKGDVQKHNQT
NRFIHHSLLLTAVSAFSEERKGYRQKIESQDLKIQSLQDENNERFQALER
RMDAQSNLVDGVVKKMQALEKENVDLVEKVKQQDKTIEEMYKEVIRKKVE
AEKNILEVQQQQNHRNNQALFRLSENDKNDKLRKKIYCSVAGCDQNVRSI
NDNQCEHHYNFNQQKQVEKKIEKEMCWNCNNNFADDNALGTCTVCVATQD
NLIKEAQQVDLFSLPDLPRVQQPPPQAERRKRADRWQSHYSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032562XLOC_032562Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051386TCONS_00051386Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..286
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableGENE3D3.90.20.10coord: 198..373
e-value: 1.1E-4
score: 21.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..442
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 67..144
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 72..122
e-value: 2.6E-4
score: 30.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 72..123
score: 9.893
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..58
e-value: 0.066
score: 12.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 141..197
e-value: 3.2E-8
score: 33.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 61..140
e-value: 5.9E-10
score: 38.0
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 72..102
e-value: 2.2E-5
score: 24.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 87..96

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051386-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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