TCONS_00051386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051386
Unique NameTCONS_00051386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1480

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051386 ID=TCONS_00051386|Name=TCONS_00051386|organism=Clytia hemisphaerica|type=transcript|length=1480bp
CTGTATTCGTTGGTTTGAAGTTTCTGTAAACAGGCCTAATAacagaaatt
ccaaaattctacTCTACGTAAAGAATCTGAGAAATTTGACATGGCTTCGA
ATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCA
GTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAA
CCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAGATTGATTCTG
TACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTT
GAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCGAACTCCCTTG
CGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAAAAGGAACAAA
ATGAAAGAGCTAAAAGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGT
ATTTGCCAAACAGAATATAAAATTGCAGATAAAAACGCAGTCCGATCGAC
AGATCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAAAAGT
GTCAATGGGTCGGATGTATCATGGATTATGAGGTCCACAAGATAAATCGA
TGTAATTTTGAACTAATCCGATGCTCGTATTACGATTTGGGATGTTTGAC
CAATATCCTAAAAGGGGATGTCCAAAAGCACAACCAAACAAACCGCTTCA
TTCATCACTCTCTGCTTTTGACAGCAGTTAGTGCTTTTTCTGAAGAAAGA
AAAGGATATCGTCAAAAGATCGAAAGTCAAGACCTTAAAATCCAAAGTCT
TCAAGACGAAAATAATGAGAGATTTCAAGCTTTGGAAAGGAGAATGGATG
CACAAAGCAACCTTGTTGATGGTGTTGTCAAGAAAATGCAAGCactggaa
aaagaaaatgttgatttagtagaaaaagtgaagcaacAGGACAAGACAAT
CGAAGAGATGTACAAGGAAGTTatcagaaaaaaagttgaagcaGAAAAGA
ATATTCTTGAggtacaacaacaacaaaatcatAGAAACAACCAAGCTCTT
TTCAGATTatcagaaaatgataaaaatgataaactACGTAAAAAGATATA
TTGTTCAGTAGCTGGTTGTGATCAGAATGTACGCTCAATAAACGATAATC
AATGTGAACACCATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAA
ATCGAGAAGGAAATGTGTTGGAATTGCAACAACAATTTTGCAGATGATAA
CGCTCTTGGCACGTGTACAGTATGCGTGGCGACGCAAGATAATCTCATCA
AAGAAGCGCAACAAGTTGATCTTTTCAGTTTACCGGACCTTCCCCGGGTC
CAACAACCTCCACCACAAGCAGAACGTCGTAAACGAGCAGATCGATGGCA
ATCGCATTattcaaagtaaaaacaaaggaaGCGAAATTAAAATAAACTTT
TCGAAAGTGTAAATTTTGATTCGAATTTAG
Run BLAST on NCBI

protein sequence of TCONS_00051386-protein

>TCONS_00051386-protein ID=TCONS_00051386-protein|Name=TCONS_00051386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MASNKQNIIQEEEMASQACAVQTDHSKCSICLMPLVNQGSSNKCHQCMAK
IDSVPNGFPFETVGPERKEFECPICLCIIKNATELPCEHLMCKECLEHYE
KEQNERAKRVGLDEAEFLCSICQTEYKIADKNAVRSTDRMIQTTLQVKCL
QKKCQWVGCIMDYEVHKINRCNFELIRCSYYDLGCLTNILKGDVQKHNQT
NRFIHHSLLLTAVSAFSEERKGYRQKIESQDLKIQSLQDENNERFQALER
RMDAQSNLVDGVVKKMQALEKENVDLVEKVKQQDKTIEEMYKEVIRKKVE
AEKNILEVQQQQNHRNNQALFRLSENDKNDKLRKKIYCSVAGCDQNVRSI
NDNQCEHHYNFNQQKQVEKKIEKEMCWNCNNNFADDNALGTCTVCVATQD
NLIKEAQQVDLFSLPDLPRVQQPPPQAERRKRADRWQSHYSK
Run BLAST on NCBI

transcript from alignment at scaffold_201:379874..385917+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051386 ID=TCONS_00051386|Name=TCONS_00051386|organism=Clytia hemisphaerica|type=transcript|length=6044bp|location=Sequence derived from alignment at scaffold_201:379874..385917+ (Clytia hemisphaerica)
CTGTATTCGTTGGTTTGAAGTTTCTGTAAACAGGCCTAATAacagaaatt ccaaaattctacTCTACGTAAAGAATCTGAGAAATTTGACATGGCTTCGA ATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCA GTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAA CCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAGATTGATTCTG TACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTT GAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCGAACTCCCTTG CGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAAAAGGAACAAA ATGAAAGAGCTAAAAGGTATAAACCCAATAGACATACAactttgtttcaa cgtttatctaacgtccaTATAGCGtttgatgaacgttgaaacaaagttgt gtgccagctgggaaggaaACGCCGGATTTTGATGGGCATTTGAAAGCTCC CTTTATCTCCTCATATTTgttgaacaaaataaaacttaGTATCAtattat ggcgcgccaaagcggaaataaatactatctctcatttcgcgacactacct ttcatttcacgacactatctttcacttcgcggcactatctttcatttcgc gacactatctttcatttcgcgatactatcttttatttcgcgacactatct ttcatttcgcgacactatcttttatttcgcgacactatctttattaaaac gacactatcttttttaaaacgatactatctttccaaaaaaacattatctt aattgaaacaatactatcttaTTTAcgggatactatcttttttatggaag ccgagaagtgccatcgacaaaaaaatatttaatctcagaaaaaaataata aattttagaataaaagaatatttaattttagaaaaataaatttgaattca gagaaaaataattgattttagaaaaacgatttaaatttagaaacaaaata tttaattttagcaaaataaatttaaattgggaaaaaaatatttaacttta ttttagtaaaaaaaaaaaaacttagaaaaattatcaatttagagaaaaaa atttaattttactttagaaaaaaaattaaaaccttaaaacataCCTTATT AATTGGAACTACttctcgcgggttttaattttagcgcttTTCGTGGTTTG TTATGTACATTAATTTTTGTTACCGAAATCTAACGCAACCGTTACCTACC TTTTTATGATACtctacttttatgcaaaaaatgagaaaaatttttacCTA CGTTGTTATTATGGGGAAAAAATGTCAGCGGAAagcaagtgacgaaaatt ttgaaggggtgacgaaatttttccccaacaAAATTTATTCCCAACATTTC ATCACctgaccaaaactttttttacccgatttttttattcccgaccaaaa acttttactcaatttttcccCAAACCAAActtcaaatccaaattttttac acctttattaaccgaaattagtgttttataaacgtcgaattacaagatct attttcgagctaactaagtgaagaaaaccatttcatttggacagtTTAGT CATGTGAAAGTGACTagctaaattgtaaatttggtcggggaaaagtgacg aatttgaaattttggtcgggagaaagtgaagaaaatacCTCTAGGTGACG ATTTTTTTCCCTGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACGATTTTTTTCCCTGAC GAAATAAAActtcgacattttttccccaatAAATAAAAGGTATTAAATAT TGAGCATAATATCGGTTCTGTCAACTTGAATTGATTGTGGATTGACATCT ATGTgatgtgcaaaaaaataatctgGTCTGAACAAAAGTGAAATCCAAAA ACAAATCCAGTAAgtatgaaaacgaaagttgtaaGTAAGTGTGTGGCCCG GGAGGAATCAggccaaaaagtttttcttttttcaaatttttttcagacgg tGGACTTTTGGTGTAAGCATGCACGGAATCAGGCTCtcccaaaaaaacag ttttttctgaagtgaacttaattttttctctaaattgatattttttctaa atttaatttttcttactaaaagtaaatattttttttctaaaattaaatat ttttttctcgatggcacttctcggcttccataataAAAATGGTATCTTgt gaaaaagatagtattgtttcaattaaaagaatgtttttttgggaaaatag tgtcgcgaactgaaagatagtgtcgcgaactgaaagatagtttcgcgaaa tgaaagatagtgccgcgaaatgaaagatagtgccgcgaaatgaaagatag tcccgcgaaatgaaagatagtgccgcgaaatgaaagatagtgtcgcgaaa tgaaagatagtatttatttccgctttggcgcacCATATCATATATCATTT TACCTGACAGTTGCTTTGTtattacagaaaaatgttttgtACACTGCTTT TTCTTTTAGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGTATTTGCC AAACAGAATATAAAATTGCAGATGTAAGCATATCATTTCTCCGTCTTGTC TATTAGTGTTGCGTACatattttcctgaaatttttttaattatattttct tattaAGTCAAGGGCTTTCTTTTGCCACAGTTATCTTTAAAAATAGTTCT GACTCAAGATAGTTTTACAAAATAGCTTTACACAAGCTCGAATTTCGAAT AAAAGGGGACTCGAATAGCTGGATGTCTACTGTCCTTACAGTTGATACAC TCTAATATATCTAACTATTCTCGGGTATCTAATAGCCACCCTCCCCCGCc aattaagtttttgaaaatttcccaccgaggacattcttattccaactccc cccccccgcttattgattttttaggaaaatgtttttaaaagttcccTTTT TCAGATTGGATGTTGGCGCTTTCAatgctcaaattttttctgtgtattta gaccttttcataaattacgtcacgaacatcacttgcctcgtattcaaaca attaccatggtgattgtgtcccttgagacattaaatgattcttttatGAA TAGGAAGTAGTTTTAATAAAAcctgctgggagttaatcaccatggtaata atttcaaaacgaggcaagtgatgttcgtgacgtaatttatgaaaaggtct attcgccGGTCCTGAGCTTGGCTCATATCATGaaattgtctttttctttt aaatgttaGAAAAACGCAGTCCGATCGACAGATCGCATGATTCAAACGAC TCTTCAAGTGAAATGCTTGCAGAAAAAGTGTCAATGGGTCGGATGTATCA TGGATTATGAGGTATGAGGTatttcactttaaaaaaatcaaaattgaatt cACTGTATATTTCAAACAAATCCGATTTCTATGCCTTTCGCCTATGCTCA AGATCAATTCTTTTGAGTGCCAAAACTCTATGATTTTTTAAGTGCTCATC AATTTAACGGTTAGTAGAAGGAATTTTTTCAGATTCTTGATCGTCCCCCG GGGGGGGGctactcgatttcgaaacgacggtatgtgccgcgaaAAATCTG CTTTTTAAAATCGTGCatttacagtgcagttcaatatggctgaaaaggta cccttttcaagaaaaactgaGCAAATTATTCTTATCAACTGttattatca gacaatagaaacttttaaaaaaaacgagaagtaaaaacctttctttttat caataattttgaatttgttttaaaattcgacccttgcagtgcaatctcac agaaacacaccctttcagtgcatatttttgggatgctgaaaaaccccaac cttaagcgcggcacatgacgtaggccagatcatatgagtgcccccccccc cccggtgatCGTCACTtgaattttttagtcaaagcacttgttttTGGAAT GTATAATGActcatagctgtcaacttcgcctcacaaaaatgcgggagagc tccaagtcggaaaaactttccccgataatccgatttttcaaaatcggaaa atcggaaaatctgggaaattttctcgtaaaatccgattttattggaaatt tttttcgcgAAATTGGGGAATTTTTCGTTCCGATCTTTCAAAATCCAGAA ATTTCGCCGTTTGGTTTTtacaaaatcagaaaatttttggaaatgcggga gatgcgggagaaaatcccaaaaatgcgggagatttggcagaattttcttc acgcgggagaaatcgttgacatgcgggagtctcccgctcaatgcgggaga gttgacagctatgtaatgtataagaaatcaaatttacatttacatccaat tttttttcggagaATAGTGTAATTCACAGACCAGAAAAGAAAACGTCCGA AAATCACCGAAATCACAATGTATGTAATGTAATGTGGCTCAATGTATCTT TAAAAATTCAACTTACTGTAGGGGTTAACATTCCTTTAATTGTGAATTCA CAGGTCCACAAGATAAATCGATGTAATTTTGAACTAATCCGATGCTCGTA TTACGATTTGGGATGTTTGACCAATGTAAGTAAAGCGTCCACGTTCGATT TTGTAAAGTATCGTTCACGAAGCACCCAAAACACCCCTGTATCGCCCTCG taaaaaaagttgagaaaacCATTCTGTGGTGATTCGAATTAGTTGTACGG AGACCATCCTAGGCGATTCCAGGGCGAACATCACCAACGTTTTTATTTGG ATATTATTTGATGAGTTTTACGCCTGGTACGCGATCTCGAAAGTTTTTCT TATACACTTCACAAACGCGCTTGCTTCAAAATAACAGAATTGAGCTGCTA GACAAGCTGTGCTCAAATTTGTCGAAATTTTTTAAGGGTCTAATTTTGAG ACCCTCATTATGTCCACACATACGGTAGCTTTTCAGATTAAAGATGAATA CACCCTGGGGGAGAGGGTATTTGCAATCTTCTCTGTGCAATCTGTCGATT TATTCGCCAGAATTGAGATTTAAGGAATAGAGCTCatacaaaacaaattt tgtttttcgtttCGACAGATCCTAAAAGGGGATGTCCAAAAGCACAACCA AACAAACCGCTTCATTCATCACTCTCTGCTTTTGACAGCAGTTAGTGCTT TTTCTGAAGAAAGAAAAGGATATCGTCAAAAGATCGAAAGTCAAGACCTT AAAATCCAAAGTCTTCAAGACGAAAATAATGAGAGATTTCAAGCTTTGGA AAGGAGAATGGATGCACAAAGCAACCTTGTTGATGGTGTTGTCAAGAAAA TGCAAGCactggaaaaagaaaatgttgatttagtagaaaaagtgaagcaa cAGGACAAGACAATCGAAGAGATGTACAAGGAAGTTatcagaaaaaaagt tgaagcaGAAAAGAATATTCTTGAggtacaacaacaacaaaatcatAGAA ACAACCAAGCTCTTTTCAGATTatcagaaaatgataaaaatgataaactA CGTAAAAAGATATATTGTTCAGTAGCTGGTTGTGATCAGAATGTACGCTC AATAAACGATAATCAATGTGAACACCATTACAATTTCAACCAACAGAAAC AAGTAGAGAAGAAAATCGAGAAGGAAATGTGTTGGAATTGCAACAACAAT TTTGCAGATGATAACGCTCTTGGCACGTGTACAGTATGCGTGGCGACGCA AGATAATCTCATCAAAGAAGCGCAACAAGTTGATCTTTTCAGTTTACCGG ACCTTCCCCGGGTCCAACAACCTCCACCACAAGCAGAACGTCGTAAACGA GCAGATCGATGGCAATCGCATTattcaaagtaaaaacaaaggaaGCGAAA TTAAAATAAACTTTTCGAAAGTGTAAATTTTGATTCGAATTTAG

Coding sequence (CDS) from alignment at scaffold_201:379874..385917+

>TCONS_00051386 ID=TCONS_00051386|Name=TCONS_00051386|organism=Clytia hemisphaerica|type=CDS|length=6645bp|location=Sequence derived from alignment at scaffold_201:379874..385917+ (Clytia hemisphaerica)
ATGGCTTCGAATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCA
GGCATGCGCAGTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGC
CATTGGTCAACCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAG
ATTGATTCTGTACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAG
AAAGGAATTTGAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCG
AACTCCCTTGCGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAA
AAGGAACAAAATGAAAGAGCTAAAAGGGTTGGATTGGATGAAGCAGAATT
CCTTTGCAGTATTTGCCAAACAGAATATAAAATTGCAGATAAAAACGCAG
TCCGATCGACAGATCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTG
CAGAAAAAGTGTCAATGGGTCGGATGTATCATGGATTATGAGGTCCACAA
GATAAATCGATGTAATTTTGAACTAATCCGATGCTCGTATTACGATTTGG
GATGTTTGACCAATATCCTAAAAGGGGATGTCCAAAAGCACAACCAAACA
AACCGCTTCATTCATCACTCTCTGCTTTTGACAGCAGTTAGTGCTTTTTC
TGAAGAAAGAAAAGGATATCGTCAAAAGATCGAAAGTCAAGACCTTAAAA
TCCAAAGTCTTCAAGACGAAAATAATGAGAGATTTCAAGCTTTGGAAAGG
AGAATGGATGCACAAAGCAACCTTGTTGATGGTGTTGTCAAGAAAATGCA
AGCactggaaaaagaaaatgttgatttagtagaaaaagtgaagcaacAGG
ACAAGACAATCGAAGAGATGTACAAGGAAGTTatcagaaaaaaagttgaa
gcaGAAAAGAATATTCTTGAggtacaacaacaacaaaatcatAGAAACAA
CCAAGCTCTTTTCAGATTatcagaaaatgataaaaatgataaactACGTA
AAAAGATATATTGTTCAGTAGCTGGTTGTGATCAGAATGTACGCTCAATA
AACGATAATCAATGTGAACACCATTACAATTTCAACCAACAGAAACAAGT
AGAGAAGAAAATCGAGAAGGAAATGTGTTGGAATTGCAACAACAATTTTG
CAGATGATAACGCTCTTGGCACGTGTACAGTATGCGTGGCGACGCAAGAT
AATCTCATCAAAGAAGCGCAACAAGTTGATCTTTTCAGTTTACCGGACCT
TCCCCGGGTCCAACAACCTCCACCACAAGCAGAACGTCGTAAACGAGCAG
ATCGATGGCAATCGCATTattcaaagtaaATGGCTTCGAATAAACAAAAC
ATCATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCAGTACAAACTGA
TCATTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAACCAAGGTTCTT
CAAACAAATGTCACCAATGTATGGCAAAGATTGATTCTGTACCGAATGGT
TTCCCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTTGAGTGTCCAAT
TTGTCTATGCATCATAAAAAATGCTACCGAACTCCCTTGCGAACATTTAA
TGTGCAAAGAATGTTTGGAACACTATGAAAAGGAACAAAATGAAAGAGCT
AAAAGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGTATTTGCCAAAC
AGAATATAAAATTGCAGATAAAAACGCAGTCCGATCGACAGATCGCATGA
TTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAAAAGTGTCAATGGGTC
GGATGTATCATGGATTATGAGGTCCACAAGATAAATCGATGTAATTTTGA
ACTAATCCGATGCTCGTATTACGATTTGGGATGTTTGACCAATATCCTAA
AAGGGGATGTCCAAAAGCACAACCAAACAAACCGCTTCATTCATCACTCT
CTGCTTTTGACAGCAGTTAGTGCTTTTTCTGAAGAAAGAAAAGGATATCG
TCAAAAGATCGAAAGTCAAGACCTTAAAATCCAAAGTCTTCAAGACGAAA
ATAATGAGAGATTTCAAGCTTTGGAAAGGAGAATGGATGCACAAAGCAAC
CTTGTTGATGGTGTTGTCAAGAAAATGCAAGCactggaaaaagaaaatgt
tgatttagtagaaaaagtgaagcaacAGGACAAGACAATCGAAGAGATGT
ACAAGGAAGTTatcagaaaaaaagttgaagcaGAAAAGAATATTCTTGAg
gtacaacaacaacaaaatcatAGAAACAACCAAGCTCTTTTCAGATTatc
agaaaatgataaaaatgataaactACGTAAAAAGATATATTGTTCAGTAG
CTGGTTGTGATCAGAATGTACGCTCAATAAACGATAATCAATGTGAACAC
CATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATCGAGAAGGA
AATGTGTTGGAATTGCAACAACAATTTTGCAGATGATAACGCTCTTGGCA
CGTGTACAGTATGCGTGGCGACGCAAGATAATCTCATCAAAGAAGCGCAA
CAAGTTGATCTTTTCAGTTTACCGGACCTTCCCCGGGTCCAACAACCTCC
ACCACAAGCAGAACGTCGTAAACGAGCAGATCGATGGCAATCGCATTatt
caaagtaaATGGCTTCGAATAAACAAAACATCATCCAAGAAGAAGAAATG
GCAAGTCAGGCATGCGCAGTACAAACTGATCATTCGAAATGTTCCATTTG
TCTAATGCCATTGGTCAACCAAGGTTCTTCAAACAAATGTCACCAATGTA
TGGCAAAGATTGATTCTGTACCGAATGGTTTCCCTTTCGAGACCGTAGGA
CCAGAGAGAAAGGAATTTGAGTGTCCAATTTGTCTATGCATCATAAAAAA
TGCTACCGAACTCCCTTGCGAACATTTAATGTGCAAAGAATGTTTGGAAC
ACTATGAAAAGGAACAAAATGAAAGAGCTAAAAGGGTTGGATTGGATGAA
GCAGAATTCCTTTGCAGTATTTGCCAAACAGAATATAAAATTGCAGATAA
AAACGCAGTCCGATCGACAGATCGCATGATTCAAACGACTCTTCAAGTGA
AATGCTTGCAGAAAAAGTGTCAATGGGTCGGATGTATCATGGATTATGAG
GTCCACAAGATAAATCGATGTAATTTTGAACTAATCCGATGCTCGTATTA
CGATTTGGGATGTTTGACCAATATCCTAAAAGGGGATGTCCAAAAGCACA
ACCAAACAAACCGCTTCATTCATCACTCTCTGCTTTTGACAGCAGTTAGT
GCTTTTTCTGAAGAAAGAAAAGGATATCGTCAAAAGATCGAAAGTCAAGA
CCTTAAAATCCAAAGTCTTCAAGACGAAAATAATGAGAGATTTCAAGCTT
TGGAAAGGAGAATGGATGCACAAAGCAACCTTGTTGATGGTGTTGTCAAG
AAAATGCAAGCactggaaaaagaaaatgttgatttagtagaaaaagtgaa
gcaacAGGACAAGACAATCGAAGAGATGTACAAGGAAGTTatcagaaaaa
aagttgaagcaGAAAAGAATATTCTTGAggtacaacaacaacaaaatcat
AGAAACAACCAAGCTCTTTTCAGATTatcagaaaatgataaaaatgataa
actACGTAAAAAGATATATTGTTCAGTAGCTGGTTGTGATCAGAATGTAC
GCTCAATAAACGATAATCAATGTGAACACCATTACAATTTCAACCAACAG
AAACAAGTAGAGAAGAAAATCGAGAAGGAAATGTGTTGGAATTGCAACAA
CAATTTTGCAGATGATAACGCTCTTGGCACGTGTACAGTATGCGTGGCGA
CGCAAGATAATCTCATCAAAGAAGCGCAACAAGTTGATCTTTTCAGTTTA
CCGGACCTTCCCCGGGTCCAACAACCTCCACCACAAGCAGAACGTCGTAA
ACGAGCAGATCGATGGCAATCGCATTattcaaagtaaATGGCTTCGAATA
AACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCAGTA
CAAACTGATCATTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAACCA
AGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAGATTGATTCTGTAC
CGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTTGAG
TGTCCAATTTGTCTATGCATCATAAAAAATGCTACCGAACTCCCTTGCGA
ACATTTAATGTGCAAAGAATGTTTGGAACACTATGAAAAGGAACAAAATG
AAAGAGCTAAAAGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGTATT
TGCCAAACAGAATATAAAATTGCAGATAAAAACGCAGTCCGATCGACAGA
TCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAAAAGTGTC
AATGGGTCGGATGTATCATGGATTATGAGGTCCACAAGATAAATCGATGT
AATTTTGAACTAATCCGATGCTCGTATTACGATTTGGGATGTTTGACCAA
TATCCTAAAAGGGGATGTCCAAAAGCACAACCAAACAAACCGCTTCATTC
ATCACTCTCTGCTTTTGACAGCAGTTAGTGCTTTTTCTGAAGAAAGAAAA
GGATATCGTCAAAAGATCGAAAGTCAAGACCTTAAAATCCAAAGTCTTCA
AGACGAAAATAATGAGAGATTTCAAGCTTTGGAAAGGAGAATGGATGCAC
AAAGCAACCTTGTTGATGGTGTTGTCAAGAAAATGCAAGCactggaaaaa
gaaaatgttgatttagtagaaaaagtgaagcaacAGGACAAGACAATCGA
AGAGATGTACAAGGAAGTTatcagaaaaaaagttgaagcaGAAAAGAATA
TTCTTGAggtacaacaacaacaaaatcatAGAAACAACCAAGCTCTTTTC
AGATTatcagaaaatgataaaaatgataaactACGTAAAAAGATATATTG
TTCAGTAGCTGGTTGTGATCAGAATGTACGCTCAATAAACGATAATCAAT
GTGAACACCATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATC
GAGAAGGAAATGTGTTGGAATTGCAACAACAATTTTGCAGATGATAACGC
TCTTGGCACGTGTACAGTATGCGTGGCGACGCAAGATAATCTCATCAAAG
AAGCGCAACAAGTTGATCTTTTCAGTTTACCGGACCTTCCCCGGGTCCAA
CAACCTCCACCACAAGCAGAACGTCGTAAACGAGCAGATCGATGGCAATC
GCATTattcaaagtaaATGGCTTCGAATAAACAAAACATCATCCAAGAAG
AAGAAATGGCAAGTCAGGCATGCGCAGTACAAACTGATCATTCGAAATGT
TCCATTTGTCTAATGCCATTGGTCAACCAAGGTTCTTCAAACAAATGTCA
CCAATGTATGGCAAAGATTGATTCTGTACCGAATGGTTTCCCTTTCGAGA
CCGTAGGACCAGAGAGAAAGGAATTTGAGTGTCCAATTTGTCTATGCATC
ATAAAAAATGCTACCGAACTCCCTTGCGAACATTTAATGTGCAAAGAATG
TTTGGAACACTATGAAAAGGAACAAAATGAAAGAGCTAAAAGGGTTGGAT
TGGATGAAGCAGAATTCCTTTGCAGTATTTGCCAAACAGAATATAAAATT
GCAGATAAAAACGCAGTCCGATCGACAGATCGCATGATTCAAACGACTCT
TCAAGTGAAATGCTTGCAGAAAAAGTGTCAATGGGTCGGATGTATCATGG
ATTATGAGGTCCACAAGATAAATCGATGTAATTTTGAACTAATCCGATGC
TCGTATTACGATTTGGGATGTTTGACCAATATCCTAAAAGGGGATGTCCA
AAAGCACAACCAAACAAACCGCTTCATTCATCACTCTCTGCTTTTGACAG
CAGTTAGTGCTTTTTCTGAAGAAAGAAAAGGATATCGTCAAAAGATCGAA
AGTCAAGACCTTAAAATCCAAAGTCTTCAAGACGAAAATAATGAGAGATT
TCAAGCTTTGGAAAGGAGAATGGATGCACAAAGCAACCTTGTTGATGGTG
TTGTCAAGAAAATGCAAGCactggaaaaagaaaatgttgatttagtagaa
aaagtgaagcaacAGGACAAGACAATCGAAGAGATGTACAAGGAAGTTat
cagaaaaaaagttgaagcaGAAAAGAATATTCTTGAggtacaacaacaac
aaaatcatAGAAACAACCAAGCTCTTTTCAGATTatcagaaaatgataaa
aatgataaactACGTAAAAAGATATATTGTTCAGTAGCTGGTTGTGATCA
GAATGTACGCTCAATAAACGATAATCAATGTGAACACCATTACAATTTCA
ACCAACAGAAACAAGTAGAGAAGAAAATCGAGAAGGAAATGTGTTGGAAT
TGCAACAACAATTTTGCAGATGATAACGCTCTTGGCACGTGTACAGTATG
CGTGGCGACGCAAGATAATCTCATCAAAGAAGCGCAACAAGTTGATCTTT
TCAGTTTACCGGACCTTCCCCGGGTCCAACAACCTCCACCACAAGCAGAA
CGTCGTAAACGAGCAGATCGATGGCAATCGCATTattcaaagtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032562XLOC_032562Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051386-exon-scaffold_201-1491911889:379874..380289TCONS_00051386-exon-scaffold_201-1491911889:379874..380289Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1510915933:379874..380289TCONS_00051386-exon-scaffold_201-1510915933:379874..380289Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1575043694:379874..380289TCONS_00051386-exon-scaffold_201-1575043694:379874..380289Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1491911889:382533..382596TCONS_00051386-exon-scaffold_201-1491911889:382533..382596Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1510915933:382533..382596TCONS_00051386-exon-scaffold_201-1510915933:382533..382596Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1575043694:382533..382596TCONS_00051386-exon-scaffold_201-1575043694:382533..382596Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1491911889:383283..383384TCONS_00051386-exon-scaffold_201-1491911889:383283..383384Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1510915933:383283..383384TCONS_00051386-exon-scaffold_201-1510915933:383283..383384Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1575043694:383283..383384TCONS_00051386-exon-scaffold_201-1575043694:383283..383384Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1491911889:384527..384598TCONS_00051386-exon-scaffold_201-1491911889:384527..384598Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1510915933:384527..384598TCONS_00051386-exon-scaffold_201-1510915933:384527..384598Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1575043694:384527..384598TCONS_00051386-exon-scaffold_201-1575043694:384527..384598Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1491911889:385092..385917TCONS_00051386-exon-scaffold_201-1491911889:385092..385917Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1510915933:385092..385917TCONS_00051386-exon-scaffold_201-1510915933:385092..385917Clytia hemisphaericaexon
TCONS_00051386-exon-scaffold_201-1575043694:385092..385917TCONS_00051386-exon-scaffold_201-1575043694:385092..385917Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051386-proteinTCONS_00051386-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:379874..385917 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.731964 0.729718 0.224539 0.446448 2.12158 2.03932 2.0207 3.17616 1.35609 2.33718 2.40958 1.44809 4.28869 2.9293 2.07751 2.55015 3.06565 2.45915 3.45544 3.71743 2.25069 1.94041 2.4562 2.16996 4.90755 4.78369 1.44487 2.62308 2.47041 2.56361
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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