TCONS_00050903-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050903-protein
Unique Name	TCONS_00050903-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1136

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050903-protein ID=TCONS_00050903-protein|Name=TCONS_00050903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1136bp
MERMSLLEKLKTLNQWQLQQQLHFAKLQSDVEAVSIPQNLSNKENLVIGR
QQQQQQPADSIHQQHFEKPSQSNFMQTMNQNALTNALKSVNSNSLNTQPI
HSNLMNENSLNSVDYEENLIDEKDEIAQAQTTNKGGGLDNWYLSGLQTVK
FMSPSDCENLTEVENDDDVISDHEEENSCHDNQEDFSDLDDVVLQYESED
GVRPFSTDVSEDEHETLLRRDENSNHDLQDPFQRYLNVNSSKTQRLVPEA
STVYTKNAHGGEQYNQGLPNRDNSALSRGGLYENEGDSTSEEENECTVIH
NEEESAEDEIAANIDERPVKSMINGIGVTFENIVENELKNDMENVLNTST
PMKNKSHKFLKRGEGLKRFQKGNNAFIPTKEKEKNKNKKPAYHNKQPKNN
KAVVMNIDPPPPNKASKTALVRKTRPGLPLKLKLKHRVQKEASTTVSNTV
PQLQHLEKIADPVKATDTMDPKSTSQPVKTTTRHDHRDAVSSSVMEASFQ
KMLIQYTNKEEKENKDLDDFEALEEAAENMSLSSNCSFVHKVLGGKTKTV
YQGEHLSALMVDGLQKFQEVGNMKSNSTVKKVTSISNNTQSEKQQDQQDD
DEAKNSKDTERPKSSYDFDDESTWSDNSLNDGEDTSIFSAGECNNDTLRD
TSDNENSPSHVFQETVPPKRIISKRKDRSVSQNTTTELEEGTVEPPSLLT
QTVDIPTSSISNTVKQKLAELEKEIKTFRMENDKLAKLREQRETEVSKLH
KEIESFQRERKAETERFESYQTEETKKLRAEKRAFEKFQKAAKAFPNKQE
REETKELKQELERLKDELKTREARWNNASIRFRTRITDLEEENGELKKEI
KIFEEQRIERWKNNHNNNKKPPRVQSPTDKALDKRESIFQDPSSIGVEMN
ERLSFSPLSAPLSTQPQMQPTLPQTKPQSLQQRNHESNETQNALTSGAMQ
HLKDGKTEVLHADGSKLITFPNGTKKTISADGKTISICFFNGDIKRLHPD
QRVVYYYAETQTTHTTFKDGLEVLEFSNKQIEKRHTDGRTEIIFPDQTVK
YVNPDGSEETVFVDGMVQNVDKTGVRTVLYPNGQREVHTNQFKRREYPNG
TIKTVYEDGRQETKYSNGRLRVKDKDGNLVIDRLKP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032262	XLOC_032262	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050903	TCONS_00050903	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009852	Tcp10_C_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 797..856
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	COILS	Coil	Coil	coord: 711..773
None	No IPR available	GENE3D	1.20.58.130		coord: 697..764 e-value: 0.045 score: 13.4 coord: 765..855 e-value: 5.6E-4 score: 19.6
None	No IPR available	GENE3D	2.20.110.10		coord: 991..1128 e-value: 3.1E-4 score: 20.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 907..941
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 862..882
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..662
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 674..694
IPR009852	T-complex protein 10, C-terminal domain	PFAM	PF07202	Tcp10_C	coord: 960..1133 e-value: 7.6E-79 score: 263.6

Blast

[Close]

BLAST of TCONS_00050903-protein vs. Swiss-Prot (Human)
Match: CENPJ (Centromere protein J OS=Homo sapiens GN=CENPJ PE=1 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 2.690e-107
Identity = 219/567 (38.62%), Postives = 328/567 (57.85%), Query Frame = 0

Query:  617 DFDDESTWSDNSLNDGEDTSIFSAGECNNDTLRDTSDNENSPSHVF-------------QETVPPKRIISKRKDRSVSQNTTTELEEGTVEPPSL---------------LTQTVDIPTS--SISNTVKQKLAELEKEIKTFRMENDKLAKLREQRETEVSKLHKEIESFQRERKAETERFESYQTEETKKLRAEKRAFEKFQKAAKAFPNKQEREETKELKQELERLKDELKTREARWNNASIRFRTRITDLEEENGELKKEIKIFEEQRIERWKNNHNNNKKPPRVQSPTDKALDKRESI------FQDPS-SIGVEMNE-RLSFSPL---------SAP---LSTQPQMQPTLPQTKPQSLQQRNHE-SNETQNALTSGAMQHLKDGKTEVLHADGSKLITFPNGTKKTISADGKTISICFFNGDIKRLHPDQRVVYYYAETQTTHTTFKDGLEVLEFSNKQIEKRHTDGRTEIIFPDQTVKYVNPDGSEETVFVDGMVQNVDKTGVRTVLYPNGQREVHTNQFKRREYPNGTIKTVYEDGRQETKYSNGRLRVKDKDGNLVID 1132
            DFDDE TW+D                CN+D +        +P   +             ++  P KR     K R      T+EL       PSL               L  + D P    + S  +++K+ ELE EI+ F+ EN  LAKLR +RE+ + KL KEI  F++++  E  R E ++ EE +KL+ E++ FEK+  AA+ FP+K+EREE + LKQ++  L+++LK +E +W++   R R++I  L  EN +L++EIK+ E  R++ WK           ++S  +  ++K++ +      FQ+   S G ++ + + ++ P+         SAP   L    + Q   P+   + L   + E   E ++    G + H  DGK E ++ +G ++I FPNGT+K +SADGKTI++ FFNGD+K++ PDQRV+YYYA  QTTHTT+ +GLEVL FS+ QIEK + DGR EI FPDQTVK + PDG EE++F DG +  V + G + + + NGQRE+HT QFKRREYP+GT+KTVY +G QETKY +GR+RVKDK+GN+++D
Sbjct:  792 DFDDERTWTD-----------LEENLCNHDVVLGNESTYGTPQTCYPNNEIGILDKTIKRKIAPVKRGEDLSKSRRSRSPPTSELMMKFF--PSLKPKPKSDSHLGNELKLNISQDQPPGDNARSQVLREKIIELETEIEKFKAENASLAKLRIERESALEKLRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERFRLDAWKRAEA-------IESSLE--VEKKDKLANTSVRFQNSQISSGTQVEKYKKNYLPMQGNPPRRSKSAPPRDLGNLDKGQAASPREPLEPLNFPDPEYKEEEEDQDIQGEISH-PDGKVEKVYKNGCRVILFPNGTRKEVSADGKTITVTFFNGDVKQVMPDQRVIYYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIFPDGTIVRVQRDGNKLIEFNNGQRELHTAQFKRREYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMD 1335

The following BLAST results are available for this feature:

BLAST of TCONS_00050903-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CENPJ	2.690e-107	38.62	Centromere protein J OS=Homo sapiens GN=CENPJ PE=1...	[more]

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TCONS_00050903-protein (polypeptide) - C. hemisphaerica