TCONS_00048525-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048525-protein
Unique Name	TCONS_00048525-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	415

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048525-protein ID=TCONS_00048525-protein|Name=TCONS_00048525-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MADVKCNEGCSDSKTICVAEQKPKKTIKRRVLNQIPAEILNNQLLNNAIK
QLPSNYNFEIHKTIWKLKQAESKRVALQFPEGLLLYACAIADIVEEFTEA
ETVIMGDVTYGACCVDDYSARALECDFMVHYGHSCLVPISATDGIKMLYV
FVDIQIDIIHFIETVKLNFANGSKLALVSTVQFITSLQAAKLELETNFNI
TIPQAKPLSPGEILGCTSPKLPEQDAIIYLGDGRFHLESIMIHNPKLAAY
MYDPYSKVFSREEYQHEEMLRNRKRAIETASKAQTFGLILGTLGRQGSPK
VLESLEEKLTAAGKKFVIVLLSEIFPGKLKLFEEIDAWVQVACPRLSIDW
GLAFQKPLLSPYELAVALEECSWKTVYPMDYYANESLGPWTVNNEKHRPV
RKPRNKQPIKIQYET

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030858	XLOC_030858	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048525	TCONS_00048525	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016435	DPH1/DPH2

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016435	Diphthamide synthesis DPH1/DPH2	PFAM	PF01866	Diphthamide_syn	coord: 79..377 e-value: 2.4E-122 score: 408.0
IPR016435	Diphthamide synthesis DPH1/DPH2	TIGRFAM	TIGR00322	TIGR00322	coord: 56..368 e-value: 2.6E-116 score: 386.5
IPR016435	Diphthamide synthesis DPH1/DPH2	SFLD	SFLDS00032	Radical_SAM_3-amino-3-carboxy	coord: 36..398 e-value: 0.0 score: 368.2
None	No IPR available	PIRSF	PIRSF004967	DPH1	coord: 39..401 e-value: 2.1E-142 score: 472.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..415

Blast

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BLAST of TCONS_00048525-protein vs. Swiss-Prot (Human)
Match: DPH1 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 OS=Homo sapiens GN=DPH1 PE=1 SV=2)

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 242/385 (62.86%), Postives = 300/385 (77.92%), Query Frame = 0

Query:   28 KRRVLNQIPAEILNNQLLNNAIKQLPSNYNFEIHKTIWKLKQAESKRVALQFPEGLLLYACAIADIVEEFTEAETVIMGDVTYGACCVDDYSARALECDFMVHYGHSCLVPI-SATDGIKMLYVFVDIQIDIIHFIETVKLNFANGSKLALVSTVQFITSLQAAKLELETNFNITIPQAKPLSPGEILGCTSPKLP-EQDAIIYLGDGRFHLESIMIHNPKLAAYMYDPYSKVFSREEYQHEEMLRNRKRAIETASKAQTFGLILGTLGRQGSPKVLESLEEKLTAAGKKFVIVLLSEIFPGKLKLFEEIDAWVQVACPRLSIDWGLAFQKPLLSPYELAVALEECSWKTVYPMDYYANESLGPWTVNNEK----HRPVRKPRNK 406
            + RV NQIP EIL N  L  AI+ LPSNYNFEI KTIW+++QA++K+VALQ PEGLLL+AC I DI+E FTEAE ++MGDVTYGACCVDD++ARAL  DF+VHYGHSCL+P+ ++    ++LYVFVDI+ID  H +++++L F   + LALVST+QF+++LQAA  EL+  + +++PQ KPLSPGEILGCTSP+L  E +A++YLGDGRFHLES+MI NP + AY YDPYSKV SRE Y H+ M   R+ AI TA  A+++GLILGTLGRQGSPK+LE LE +L A G  FV +LLSEIFP KL L  E+D WVQVACPRLSIDWG AF KPLL+PYE AVAL + SW+  YPMD+YA  SLGPWTVN+ +    H P R  R K
Sbjct:   30 RGRVANQIPPEILKNPQLQAAIRVLPSNYNFEIPKTIWRIQQAQAKKVALQMPEGLLLFACTIVDILERFTEAEVMVMGDVTYGACCVDDFTARALGADFLVHYGHSCLIPMDTSAQDFRVLYVFVDIRIDTTHLLDSLRLTFPPATALALVSTIQFVSTLQAAAQELKAEYRVSVPQCKPLSPGEILGCTSPRLSKEVEAVVYLGDGRFHLESVMIANPNVPAYRYDPYSKVLSREHYDHQRMQAARQEAIATARSAKSWGLILGTLGRQGSPKILEHLESRLRALGLSFVRLLLSEIFPSKLSLLPEVDVWVQVACPRLSIDWGTAFPKPLLTPYEAAVALRDISWQQPYPMDFYAGSSLGPWTVNHGQDRRPHAPGRPARGK 414

The following BLAST results are available for this feature:

BLAST of TCONS_00048525-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048525-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPH1	0.000e+0	62.86	2-(3-amino-3-carboxypropyl)histidine synthase subu...	[more]

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TCONS_00048525-protein (polypeptide) - C. hemisphaerica