TCONS_00047906-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047906-protein
Unique NameTCONS_00047906-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047906-protein ID=TCONS_00047906-protein|Name=TCONS_00047906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MAARIGKVAADTSAFFLCDVQDKFRPLIRYFPEICTVANRLSAASKALDI
PLVVSEHYPKALGNTVPEIDTGHGTVFPKTSFSMAVKDLKDHVKTVRPNL
KSVILYGIEAQMCVQQTALDFLEEDYDVHVIADATSSRTMTERLMALERM
KQSGAFITTSESILFMLLKDAKHERFREIQKIIMDSAPYQGLVPNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030483XLOC_030483Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047906TCONS_00047906Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000868Isochorismatase-like
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000868Isochorismatase-likePFAMPF00857Isochorismatasecoord: 13..161
e-value: 1.5E-24
score: 87.0
IPR000868Isochorismatase-likeSUPERFAMILY52499Isochorismatase-like hydrolasescoord: 1..189
NoneNo IPR availableGENE3D3.40.50.850coord: 2..196
e-value: 1.5E-43
score: 148.3
NoneNo IPR availableCDDcd01012YcaC_relatedcoord: 14..169
e-value: 3.93031E-57
score: 178.557

Blast
[Close]
BLAST of TCONS_00047906-protein vs. Swiss-Prot (Human)
Match: ISOC1 (Isochorismatase domain-containing protein 1 OS=Homo sapiens GN=ISOC1 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 4.047e-61
Identity = 86/190 (45.26%), Postives = 134/190 (70.53%), Query Frame = 0 
Query:    5 IGKVAADTSAFFLCDVQDKFRPLIRYFPEICTVANRLSAASKALDIPLVVSEHYPKALGNTVPEID-TGHGTVFPKTSFSMAVKDLKDHVKTVRPNLKSVILYGIEAQMCVQQTALDFLEEDYDVHVIADATSSRTMTERLMALERMKQSGAFITTSESILFMLLKDAKHERFREIQKIIMDSAPYQGLV 193
            +G +   ++ FF CD+Q++FRP I+YF +I +V  RL   ++ L IP++V+E YPK LG+TV EID TG   V PKT FSM + +++  +  + P ++SV+L+G+E  +C+QQTAL+ +    +VH++ADATSSR+M +R+ ALER+ ++G  +TTSE++L  L+ D  H +F+EIQ +I  SAP  GL+
Sbjct:  107 LGNLTPSSTVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIVTEQYPKGLGSTVQEIDLTGVKLVLPKTKFSMVLPEVEAALAEI-PGVRSVVLFGVETHVCIQQTALELVGRGVEVHIVADATSSRSMMDRMFALERLARTGIIVTTSEAVLLQLVADKDHPKFKEIQNLIKASAPESGLL 295
The following BLAST results are available for this feature:
BLAST of TCONS_00047906-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISOC14.047e-6145.26Isochorismatase domain-containing protein 1 OS=Hom... [more]
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