TCONS_00047292-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047292-protein
Unique Name	TCONS_00047292-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	477

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047292-protein ID=TCONS_00047292-protein|Name=TCONS_00047292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MQCNIRSIFHGILSNLVQILEKWKYSNKTTLTPSPNCSPSLIELNHSASX
FTKLLTFPHRTEPFCFKAFYRNDVAIPHLDREIGDFIVNAGAATDSSVEK
IKVKVKLRVDKNGCFSVCSATMVETLPQSEAPIEEPMETDTSTPVVNGDN
KENNDKPAESAETPSKTEEEQKGQDQAKKSPEEATTDKKEDKSDDVKKPE
AKKAKKLTKSTDLKIDPIQTGLTAEDIANLVSIEQELQFHARVEKERADA
KNNLEEYIYAMRDKLSGDLENYVEEGQRDEFSVQLEDGESWLYGDGEDLQ
KQAYIDKLEGLKKISQPMEDRCVAHQAIPGAIDNFGKAMTHYKKILEQYE
NKDEKYVHIEAEEMKKVKNKVEEKFNWFNEKLNEMGKCPKTKNPPVYPSQ
IETEKKLMQTFCDPIVNKPKPKVEPPKDEPKKEGEEGAKPEETKNEKTTE
QPQTTENMETDTPKPEGKSEDLGMEVD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030124	XLOC_030124	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047292	TCONS_00047292	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013126	Hsp_70_fam
IPR029048	HSP70_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 240..260
None	No IPR available	COILS	Coil	Coil	coord: 342..362
IPR013126	Heat shock protein 70 family	PFAM	PF00012	HSP70	coord: 204..321 e-value: 2.4E-8 score: 32.5
IPR029048	Heat shock protein 70kD, C-terminal domain	GENE3D	1.20.1270.10		coord: 222..334 e-value: 7.0E-17 score: 61.1 coord: 335..431 e-value: 4.9E-11 score: 42.3
IPR029048	Heat shock protein 70kD, C-terminal domain	SUPERFAMILY	100934	Heat shock protein 70kD (HSP70), C-terminal subdomain	coord: 340..427
IPR029048	Heat shock protein 70kD, C-terminal domain	SUPERFAMILY	100934	Heat shock protein 70kD (HSP70), C-terminal subdomain	coord: 224..321

Blast

[Close]

BLAST of TCONS_00047292-protein vs. Swiss-Prot (Human)
Match: HS74L (Heat shock 70 kDa protein 4L OS=Homo sapiens GN=HSPA4L PE=1 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 5.695e-70
Identity = 164/437 (37.53%), Postives = 241/437 (55.15%), Query Frame = 0

Query:   45 NHSASXFTKLLTFPHRTEPFCFKAFYRNDVAIPHLDREIGDFIV-NAGAATDSSVEKIKVKVKLRVDKNGCFSVCSATMVETLPQSEAPIEEPMETDTSTPVVNGDNKENNDKPAESAETPSKTEEEQKGQDQAKKSPEE-------ATTDKKEDKSDDVKKPEAKKAKKLTKSTDLKIDPIQTGLT---AEDIAN-LVSIEQELQFHARVEKERADAKNNLEEYIYAMRDKLSGDLENYVEEGQRDEFSVQLEDGESWLYGDGEDLQKQAYIDKLEGLKKISQPMEDRCVAHQAIPGAIDNFGKAMTHYKKILEQYENKDEKYVHIEAEEMKKVKNKVEEKFNWFNEKLNEMGKCPKTKNPPVYPSQIETEKKLMQTFCDPIVNKPKPKVEPPKDEPKKEGE-----EGAKPEETKNEKTTEQPQTTEN---METD 461
            NH A  F+K++TF H+ EPF  +AFY N   +P+ D  IG F + N    +D    K+KVKV  RV+ +G FSV SA+++E         + PMET+TS      +NK+N DK           +EE   +  A+ +PEE        T     DK D + +   KK K   KS DL   PIQ+ L     +D+ N  +  E ++    ++EKER DAKN +EEY+Y  RD+L    E ++      + S  LED E+WLY DGED  KQ Y+DKL+ LKK  QP++ + + H+  P A+++ GK +    K++E Y NKDE+Y H++  EM+KV+  + +  +W N K+N   K   T++P V  S+I  + K +  FC+PI+ KPKPK E P+D+PK   E     +G    ETK++ T +  Q T++   ME D
Sbjct:  423 NHPAP-FSKVITF-HKKEPFELEAFYTNLHEVPYPDARIGSFTIQNVFPQSDGDSSKVKVKV--RVNIHGIFSVASASVIEKQNLEGDHSDAPMETETS---FKNENKDNMDKM-------QVDQEEGHQKCHAEHTPEEEIDHTGAKTKSAVSDKQDRLNQT-LKKGK--VKSIDL---PIQSSLCRQLGQDLLNSYIENEGKMIMQDKLEKERNDAKNAVEEYVYDFRDRLGTVYEKFITPEDLSKLSAVLEDTENWLYEDGEDQPKQVYVDKLQELKKYGQPIQMKYMEHEERPKALNDLGKKIQLVMKVIEAYRNKDERYDHLDPTEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCNPIIYKPKPKAEVPEDKPKANSEHNGPMDGQSGTETKSDSTKDSSQHTKSSGEMEVD 839

The following BLAST results are available for this feature:

BLAST of TCONS_00047292-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HS74L	5.695e-70	37.53	Heat shock 70 kDa protein 4L OS=Homo sapiens GN=HS...	[more]

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TCONS_00047292-protein (polypeptide) - C. hemisphaerica