TCONS_00047130-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047130-protein
Unique NameTCONS_00047130-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047130-protein ID=TCONS_00047130-protein|Name=TCONS_00047130-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MEVNFSRTKSALEKLLEKFKCNQCQKILSETCSFELCDHFFCRRCANSLV
DDGKPCPKCNTVLWKEHMQEVHWVSEFLSVTNRIKNVMDGKPSESNDTVV
EKVVSSSDTTPKTFTKVQDVSTKEISVDKEEDATKTTRTPSSVTSEPLKT
KRSSSSRRRTIAIKDSKRRKSSQETKTSTTRSKKSDANEKTSKTPKKKKI
QLEKKNMKGETPLHVACIKGDSDRVKELLELGAKPNTKDFAGWTPLHEAC
NHGFTEVVELLLQHGAYVDDVAGDDMETPLHDAVSNNHIDVVKCLLKTTN
APIGTRNGQGLLPKDCCTTDEMRKLFESS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030050XLOC_030050Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047130TCONS_00047130Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 257..271
score: 39.13
coord: 209..224
score: 38.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 275..303
e-value: 0.058
score: 22.5
coord: 208..237
e-value: 1.5E-4
score: 31.1
coord: 241..270
e-value: 1.9E-5
score: 34.1
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 209..236
e-value: 4.9E-6
score: 26.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 275..297
score: 8.923
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 13.437
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 12.235
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 283..328
e-value: 2.3E-6
score: 26.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 241..301
e-value: 1.1E-12
score: 48.3
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 162..282
e-value: 8.6E-30
score: 102.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 208..297
score: 30.847
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 200..319
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..96
e-value: 1.0E-9
score: 37.5
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 270..328
e-value: 0.012
score: 11.6
coord: 144..310
e-value: 1.9E-20
score: 70.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..206
NoneNo IPR availableCDDcd00204ANKcoord: 206..313
e-value: 1.09099E-32
score: 117.87
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 4..89
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 37..46
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 21..60
score: 9.76
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 20..63
e-value: 3.20214E-4
score: 36.6548

Blast
[Close]
BLAST of TCONS_00047130-protein vs. Swiss-Prot (Human)
Match: ANR12 (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 2.574e-33
Identity = 64/136 (47.06%), Postives = 89/136 (65.44%), Query Frame = 0 
Query:  182 SKKSDANEKTSKTPKKKKIQLEKKNMKGETPLHVACIKGDSDRVKELLELGAKPNTKDFAGWTPLHEACNHGFTEVVELLLQHGAYVDDVAGDDMETPLHDAVSNNHIDVVKCLLKTTNAPIGTRNGQGLLPKDCC 317
            S+ + A +KT  +  ++K ++ K+N +GETPLH+A I+GD  +VKEL+ LGA  N KDFAGWTPLHEACN G+ +V ++L+  GA V+    DD +TPLHD+ S+ H D+VK LL+    P    N  G  P D  
Sbjct:  158 SQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDD-DTPLHDSASSGHRDIVKLLLRHGGNPFQA-NKHGERPVDVA 291
The following BLAST results are available for this feature:
BLAST of TCONS_00047130-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR122.574e-3347.06Ankyrin repeat domain-containing protein 12 OS=Hom... [more]
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