TCONS_00047130 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047130
Unique NameTCONS_00047130
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047130 ID=TCONS_00047130|Name=TCONS_00047130|organism=Clytia hemisphaerica|type=transcript|length=1316bp
cacttaattggccggaaagccgattacgacgcaaacacaaaaacaaaaac
aattcgcaaaaaatcgagattccagtgcaatatattgcgtgaagctatga
gtgcctcctcagtCGCTGCGCTCCTTGCGGGGGCAATTATTCAGACAGTC
GACAACTGACAGAACAGAAAATGGAAGTAAATTTCTCAAGAACAAAAAGT
GCACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTGTCAGAAGAT
TCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATCACTTCTTTTGCAGAC
GGTGTGCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAATGCAAC
ACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTCCGAATT
CCTTTCCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGCCGAGTG
AAAGCAATGACACAGTAGTAGAAAAGgTTGTCTCGTCATCAGATACTACA
CCGAAAACATTCACCAAGGTTCAAGACGTTTCAACCAAAGAGATTTCTGT
AGACAAAGAAGAGGACGCAACTAAAACTACACGTACACCATCTTCTGTCA
CCAGtgaacctctgaagacaaagcGATCTTCATCGTCTCGACGCAGAACA
ATAGCTATAAAAGATTCCAAACGTCGAAAATCATCTCAAGAAACGAAAAC
ATCTACAACAAGAAGTAAAAAATCAGATGCcaatgaaaaaacttcgaaaa
ctccgaagaagaagaaaattcaaCTGGAAAAGAAGAATATGAAAGGCGAA
ACTCCTCTACACGTTGCTTGCATTAAGggcgACAGTGACCGAGTAAAGGA
ACTTCTTGAGCTTGGTGCGAAACCAAATACAAAAGATTTCGCTGGTTGGA
CACCTTTGCACGAGGCATGTAACCACGGTTTTACGGAAGTTGTTGAATTG
CTTTTGCAACATGGCGCATATGTTGATGACGTTGCAGGAGATGACATGGA
GACACCCCTTCATGATGCTGTCTCTAATAATCATATTGACGTCGTCAAAT
GCTTGCTCAAAACAACTAATGCACCAATAGGAACAAGaaatgGTCAAGGA
CTTTTACCGAAAGATTGTTGTACTACCGATGAAATGCGAAAACTCTTCGA
ATCAAGTTAGTCATTTCTTTCCCCCAAAATTGTATATAAACTTATTTTAC
CGAAACATTTTTAATAATAACATTAACACTAAAAATCTTCACCAATTCAT
TTTCCCAAGTCGAATTGTCCTGtcattgtttcaaaaagtcCTTTGCTTAG
ATAACCTTTCTATACA
Run BLAST on NCBI

protein sequence of TCONS_00047130-protein

>TCONS_00047130-protein ID=TCONS_00047130-protein|Name=TCONS_00047130-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MEVNFSRTKSALEKLLEKFKCNQCQKILSETCSFELCDHFFCRRCANSLV
DDGKPCPKCNTVLWKEHMQEVHWVSEFLSVTNRIKNVMDGKPSESNDTVV
EKVVSSSDTTPKTFTKVQDVSTKEISVDKEEDATKTTRTPSSVTSEPLKT
KRSSSSRRRTIAIKDSKRRKSSQETKTSTTRSKKSDANEKTSKTPKKKKI
QLEKKNMKGETPLHVACIKGDSDRVKELLELGAKPNTKDFAGWTPLHEAC
NHGFTEVVELLLQHGAYVDDVAGDDMETPLHDAVSNNHIDVVKCLLKTTN
APIGTRNGQGLLPKDCCTTDEMRKLFESS
Run BLAST on NCBI

transcript from alignment at scaffold_122:66999..80777-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047130 ID=TCONS_00047130|Name=TCONS_00047130|organism=Clytia hemisphaerica|type=transcript|length=13779bp|location=Sequence derived from alignment at scaffold_122:66999..80777- (Clytia hemisphaerica)
CACTTAATTGGCCGGAAAGCCGATTACGACGCAAACACAAAAACAAAAAC
AATTCGCAAAAAATCGAGATTCCAGTGCAATATATTGCGTGAAGCTATGA
GTGCCTCCTCAGTCGCTGCGCTCCTTGCGGGGGCAATTATTCAGACAGTC
GACAACTGACAGAACAGAAAATGGAAGTAAATTTCTCAAGAACAAAAAGT
GCACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTGGTGAGTTCA
GTACGTACATTTGTTTCCAACAAATGGGCTTTTTCACTTGATTCATCAAA
AAAGTGACCGTAAGTTCCAGCCAGCCCAGGAGGACGACCAGCAGGCAAGC
CAAGGGAGGACCCTGCCGACGCACCGGACTTAATGAGCACCGGACACGAG
AAAGTCCGGTGTAAAATTAGAATTTTTTTTACCACGGGACAACTTCTACA
CCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAGGATATTTTTTCC
CACCGGACAATCAAAACAACGGACATATGACCAGTCCGGTGCATCCGGTG
TTTCTTAATTTTTTGTTTCATAAATGTCCGGCGTCCAAAATTCCCTGTAT
ACAACACCGGACTGACAACAGACTTATTGCGTCTGGTGTACGAGAGGATA
TACTTTTGCCACCGGACAAATACACCGGACAGTCCGGTGCGTCGGCAGGG
GCCTGCCCAGGGCAGGGCGGAGGGGGGAGGGGTATTTAGGCAAATAGAGG
ATACAGTGTGCACGCGCTTAAGGGTACCTTTTTTTATTTTCAAGGTCCCG
CTAAGTGTCGGAAAAATCAGAAAATCAAATTTCAGTCCCACTAAGGGTCG
GAGAAAGGGTGTCGGGCGGGTATAGACCTTTTTTCAAAGAGGACGTCCTG
TTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGAGCCATGCATA
ATCAGTGCGTCTCAAACCGCGATATTTCGAGAGCACGGAAGCGCGTCAAA
ACACCAGCTTTTTTAGAGTTTTGTCTCGTTTACCCAAACGCTGCAATCCN
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TAGGGGGAATTTTGTTCGATTTTTTGGAATCACTCGAATGTTTTGTTAGA
AGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAATT
ACAATGTTTCCAATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAA
TATGACGGTCTCAGGCAAAAATCATAGGGTTCAAAAATAATAAAAATTTT
AGCTCGAGAAAATGGAGACCTGTTGTATATTTTTGGAAAGCTCTCCAAAA
ATTAAGATTAGAGATATATTGCAAGTATAGGTGATTTCTGTACCTAACTC
GAGATATTAGCCCTTGAAAACCGTGTTTTTCAGCCAGAAACAACTATTTT
GTCCAGTTTTTGCGCTTTTTGAACGGCTAGTTCGAAACGCAGGTCACAGG
TCACAGGTCAACAGGTCACTAGGTCACAGGTCAACAAAGTGCAGACCGAA
AAAAAGATAATAAGATCATAACATATACATAACATAACATCAATACATAA
CGCATTAAATTACAAAAAATTAATACATATTATTTAGATATTATAAAATG
ACAATTGAATAAAATAACAACCTAGTGACACTTACTTACAAAAATATTAA
CAGAATCATAAAATCTGATGCAAGAAAAGAGAAAAANNNNNNNNNNNNNN
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NNNNNNTATTTAGCATACCGAATGTGATGATAACAATATGGCTGGATATA
AAATTACACCAATCAGAAGCTTGTGAGTTCTCTGAGAAGGTAGTTTTAGA
GTGATGAGTTTTATTATATGTAACCATCATATAACATTACAAACATTACA
ATGTAATATACCTGTTATACGTATAATATGGTTTTAAATTTTCTGGTCTG
CATCATACACGGCGCAAACTGCGAAAGATCGATAAAAGCACATGGTTAAA
TTTTGATGTTTGAAATGGTTTTATATGGATGAAATTGCTTGAGAATTATG
TTTTTGATCAGTTTTGATAATTCTTTGTGTTTTCCAAACATTTTCCTCTG
CAATGACATTGATTAGAGTCAACCTGTCATCACTGACCTGTGACCTGTGA
CCTGTGACCTGCGACCTGTGACCTGTGACCTGCGTTTCGAACTAGCCGCT
TTTTGAAGATGTTTGGAGAAAGTTTGAAATATCAAATTCATAGAAAAGTT
AGTAGAAAAAATCCTGGAGAGTCATTTACAATCTATCCACGACCCGGAGA
AAGAGGAAACTTTCTAGTTGAATTAAAGTAAAGAAATTGAACTAAATCGA
ACTTAGTTGAAAGGACTATTTGCCAAATTTGTGGAACTTTTCTTGTTGGT
GAATTCGTCGACCATTTCTTCTTGTCGAACTTTGTCAAACTTAATATGTT
TTGTTGACTTTAATCAAATACACACAATGATGATATAGCGACTTTTGAAA
AGTTTGATTAAATATAATATAAATTTTTTTATTTTTTTTAAAATTTATTC
TTTATTTAAAGTTGGGTAAAAACTGCTAGAAAATACAAAAGTAAATTCTA
ATTAAGTCCAACTGTCGTAAAAATATTATATAAAAGCTATTAAAATAAAA
TCCTAAGAAAAAGAAAACGAAAAACTATTTAAATTTTTGCACGTGCATTT
GGAAAGTATATCGCTTTCGTTTATAGCTTTAAGAAAAAAGTTAAGATCAT
CGTTTGATTTAACGGAAGATAGTAGTTTATTCCAAGATTGATACAGCTCT
AAAGTCAAACGTATTGACTCCAAAAGCACTGTTATATTTTTTATATGATG
GCAAGATTATGACCGGAACGAAGTTTATAACGAGATTGCAAGGTTGTGAA
TATACCATGCATAATACGTGACCCAAGGCCATGCGTAGATTTAAAAACTT
CAGTTATGAGGAGTTTAAGATTTCTTGCATGAATATCTACAAAGTTGCAA
TCTGTTAATAAGGTACCATAGTTCGAGATTGATTCATTTTTCAGAGCACA
AAGTGCTCTGTGATGGCATTTCTCAATCAGGCTATTTCCCCCCTTTCCAC
AGAACATCCAAACAAGTGGGCAATAATTATAGGGTGAAAGAATATAAGAG
TTAACTTACCCTTCTTAGAACCCGGAGTTTTTGGTTTGATTTTTTACATA
ACTCGGTGATATGAGGAATGAATGACAGTCTGCTGTCAATTTTTATGCCC
AAAAGCTTAACAACATCAACACTTTTGATAAAATAAGTCATTAATGAAAA
TATTAAACAACAAAGGACCTAGAATAGAGCCTTGAGGTACCCCAAGTAAG
ATATCAAGCCATGAGCTTAGATGTGACCCTACACGAACTCTATGCNNNNC
CCCAAGTAAGATATCAAGCCATGAGCTTAGATGTGACCCTACACGAATTC
TATGCTTCCGATTGCTGAGATAACTGTGCATTAGTTTAACAGCACTCTCA
CTGAGTCCGTAAGCAGAGAGTTTTGTTTAGCAAGAAGTAGATTATGAGGC
AAGCAATCAAAGGCTTTTGACAAGTCAATCAAGACTGCTCCCACTTTAAA
ATTATTTGCTATATCACTTTGCCATTGTCTGATCATATTTAAAATGGCAT
TTTGAGTGCTATGGCCTTTTCTGAAACCACAAAGAAGCTTAGAAAATTGA
GGCTCGGAATGAACGTTGAGTTGATTTACAATCAGGCGTTCAAATATTTT
TGATACAACTGGGAGTAAACTTATTGGTCTATAATTGGCTTTATCCGTCG
AACAGCCTTTTTTTAAACTAGGAATAATGTCAGCAAGCTTAAGTCGATCA
GGAAAAGTTCCAGATTCCACGCAATTGTTAAAGCATGTGGTCAAAAATGG
TACACAGGTATTTGCAGCAATCTTAAGCATACGAGTTGGTATTGTCCAGC
TTACAGATTTAGTTGTTTAAGCTCAAAATGACCTTGAGAACTTCAGTCTC
TTCGACCTTGGTGAAATCAAAAAATTGGTCTGAATTTCGGCTTCGATTTA
TTTCTTTTAAAAATACTTGGATGATTTTGAAAAGTTAACTCAGAAATATC
ATCCGAATTCAGGGATGTAGATTGATTTGACTAAGATGGAATTTCAAGAG
TTTCAGTGATCCTATTAAAATAAGTGTTAAAAATATTGGCAACACGTTCA
TTCATCGTTCATCGTTCATCTGATGTATGTAAAACATCATTTTCTAGCAG
TTGAATCTTTCCTTCAGCTTTGCAGTTTTTATCTGAAAATTTAGTTTTTA
TGGCATCCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNGGAGAAAAGTTTCTTTGCTTTTTTGTTTAATCGAACAACCAAAT
TTCTCTGGCGATTGTAGATAGCTTTATCCTCAGGCTGTTTAGATTTTATA
GCCACTGCTTTGAGATGAGACCTTTTCATGATAGCCTTCCTGAGGTCTTT
TGTGACATGAGGTTTGTTATTTGCCCTGAGAAATTTGGTTTTCAGTGGAG
CATGCCTGTTTACAATATCATTAAAGACATTTTCAAACTGATCGTAATTT
TCAAAAATGTTACTGGAAATGCAATGTGCTAGCATATAAAAAATTATTTT
TATTAAAATTTTTATAATCTCTATATTTGATAATTTTCGGAGATAATTTC
GTGTACTTGGTCTTTAAGCACTGCATAAATTAGCCGATGGAAATCACTAA
GCCCTGTTTCTACCGTGCCTGAATTTTTAGAAAGATTTTTAGAATTTGTT
AGGATAAGATCTATACACGTTCCTTTTTCAGATTTAAAACAGGTTTTTGT
TTTGATGACATTCGACATGTCATTCAGTTTAAGGAAACGTGCCATTTTAG
GATCGGTAGGTTTGAGGTTAAAATCTCCAATGACTATGATGTTATTATAG
TCAAGCGACCGTCGTACGTTATTTTTTCTAATTCACAGTTTTTCACTTTA
TTTTAGTCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATC
ACTTCTTTTGCAGGTAAGTTTTCTTGTTACTTCTTTTGTAACAAAGAGGA
TCCAAGCCTGCCAATGCTCATAGTTAAGTCGTGAGGCTCACGTTTTTTAA
CCTAATTTATAGAAGGTCTTACGGTATGGTTGCTATCCGAAATCTCACTG
TCTTTCAGAGTCTTCCTGCTTGCAAGTGATCTCTAAAATTTCTAAATTTG
ATCATTTTATACTTATAAGAACGATCAATAAAAGCTCCAACAATATTATT
ATACAAGGATAAGCTGATAATGTCTTGTCTTCTTATTTTACAATTTTTGT
CCTTTTTTGAGAAAAAAACACATTTGAAAAAAGAATTATTTGAATCCAAA
GACACTTTTCAAACCTTTTAATGAGTTTGTGAAAAGTTACGCATTAAAAT
AAAATCTCTGAGTGCCTGAATCTCAAGGTTTTGAAATTTTAGAGTTTAGC
ATGTCTGTATATAATTATTTTCAATCAGTTTCAATTAAGTAAGAATATCT
TTCATATTGAAAAAAGACTAATAATAATAAATGTGTAGCACCCCGAGATA
CTTCAATACATTCATCGCAATTCATTTCTTATGATTATTTCTTGTTTCAT
ACAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAA
TGCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTC
CGAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGC
CGAGTAAGTTTGACTATAGCTTTTGATAGCTTATGTTTTTACGTATGATA
AGGAGTTGACAGTCTTGCGATTTAGCCTTTTCTCGCCGGGACGAGATGAA
GTTTTAACAAACTTATTTGATTTGGTTGGTGGTTAACCCAGTAATAAAAC
AATTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCTGTCTGTG
TGTGTGTGTGTGTGTGTGTCTGTCTGTCACAAAAACTTTAGGGCAGCCTG
GAGACTTCAAAAATGGTCATATTTAGCTGAAATTTGGCACACTTGTTCCT
TGGGTAAATATCTGGGGGTGTTTTTTTCATTNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTTGATTTTTGGGGCCTGGGGACGAGTTTT
CCGCCAAAACGAGGCTAAAACTTTAGAGCAGAGCCTACATGCCTCAAAAA
TGGTTGGTTTATCATAGAAAACCACATTTTATCACTTTCTTTCAAGAGAT
GTGAGAAGATGTATCGCATAAAATTTGAGTAGCCACTGAACTTCACTAAA
TCCATACAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCA
TACAAAAAATAAATTTTCAACTGCTCTGATGGTTGATAAATTTAATTTTT
TAAACTTAATGTAATACTCAATAAGCTAATATTTACTTACCAAAGACAAA
TGTCTTTAAAGCCACAAAATTTCACATTTTTCTCAACTTCAGTTGAGCTA
GAATCTGACAATGTATGTATGTATGTATGTATGTGTGTGTGTATGTATGT
CTGTCCGAAAACTTTGGGGCAGGCTGAAGACTTCAAAAATGATCGGGTTT
GGCTGAAATTTGGAACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTT
TTTCATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTCACGAGTTTCGC
CAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATCG
GATTTGGTTGAAATTTGGCACACTCGTTCCTTGGGTGAATATCTGGGGGT
GTTTTTTTCATTTTTTGAAAATTTTCATTTTTAAGGGGGTGGTCACGAGT
TTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAAT
AGTCGGATTTTGTTGAAATTTTGCACACTTGTTCCTTGGGTGAATATCTG
GGGTTTTTTTTTTCATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTCA
CAAGTTTTTATTATTTTATAATTTCCATTTTGAGGGGGTGGTCATGAGTT
TCCAGTTGAAATTGGTTACAATTTTACAATTGGGCCTACGAATGATTTAA
AAACACTGAAGTTGAGCCCAGTGCGGTTAGCACGTTCGACAGTGTGGTTA
CTTTTTCTAAAGAACACGTCATTTTTTTACTTCAAATGACCAATTATTAG
AGTATTTTATAAAAACTCCATCTGCTTGTTTTGGCCAGTCGTTTGCTTGT
TTATTATTCCTCACTTTGGTGACCAGGAACTGTTGGATTTATTTTTACTA
TCTTTTACAATTTTAGGTGAAAGCAATGACACAGTAGTAGAAAAGGTAAA
ACTTGTCCCATTTTTCTGACTTGTCTTTTTTTTAACGACAATTCAAAACG
ATACTAATTTTTCTCACCAAACATCTCACCAAACAAATTTCTTTACTCTC
AATCCGTCTATTAATTACTACGATTTGACAAATTTTTTCCTATTTTTAGG
TTGTCTCGTCATCAGATACTACACCGAAAACATTCACCAAGGTTCAAGAC
GTTTCAACCAAAGAGATTTCTGTAGACAAAGAAGAGGACGCAACTAAAAC
TACACGTACACCATCTTCTGTCACCAGTGAACCTCTGAAGACAAAGCGAT
CTTCATCGTCTCGACGCAGAACAATAGCTATAAAAGATTCCAAACGTCGA
AAATCATCTCAAGAAACGAAAACATCTACAACAAGAAGTAAAAGTGATGG
AATTTCCTTTTGCTTGTTTTTAAACTTACAAGATCTACACAATGTACTAT
GATATGAGTTGATAACGTCGAGTAAGGTCGACTTCCATTGCGTTTCAACT
ACAATAGTTCAACGAGCTCACAACAAAAGTGAGTGGAACGGACTCAGATT
GGAATTTATTACTTTCGCATAACTAGTACACTGCTCTATCAACTGAGCTG
CTCATGTTTACGTAGATCAACCCAATTTTCTTTTTGTGTTTAATTTCAGA
ATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAAGAAGAAGAAAATTC
AACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTCTACACGTTGCTTGC
ATTAAGGTTTAGATTTAATCAATAATAGCACTTCTTTTAAAATTTCGAAT
ATCTGAGTTCAGTATCTTCTAGCTTCTGCTTCAGAGCAATTACCCGGCTG
TTATTTTAATGTTCTCTTACAAAAAATTATTTACAACTATTTTTTTTTTC
AGGGCGACAGTGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACCA
AATACAAAAGATTTCGCTGGTTGGACACCTTTGGTAAGTAGACCTTAACA
CCCCTTGATTGATGACAAATTATGTGACGTGCTGCGAAACGTTATTGAGC
TTTAACCCAAGTAGGCAATTATTTCAACAATAAAATAATGATAACACACC
GGCGGTACCAGTGAAAAAATATGTTAGAAGGTATGAGGAATAATTGTTAA
AAAGTATTTTAAGGATGAATATCTTTTAGGTGATTTTTCATTTTTTCAAC
CTTTTTCTTTCCCTCCAGCACGAGGCATGTAACCACGGTTTTACGGAAGT
TGTTGAATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGCAGGAG
ATGACATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATATTGAC
GTCGTCAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACAAGGTA
AGATTCTTTTTTCTCTGAAATTTGGCACAATTGTTCCTTGGGTGAATATT
TAGATTTTTTGAGGCCTGGGTACAAACAAATCTTTTGTTTTGTTTTGCTA
CAATCGGGCATATGAATAATTTCAAGCTTACTAAAGTTTTAAGCCCTGTG
CATTCCGCGCGTTCGACTGCGTATGCTTAGATCTTTGTCTTTTTCTTTAG
AAATGGTCAAGGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATGC
GAAAACTCTTCGAATCAAGTTAGTCATTTCTTTCCCCCAAAATTGTATAT
AAACTTATTTTACCGAAACATTTTTAATAATAACATTAACACTAAAAATC
TTCACCAATTCATTTTCCCAAGTCGAATTGTCCTGTCATTGTTTCAAAAA
GTCCTTTGCTTAGATAACCTTTCTATACA

Coding sequence (CDS) from alignment at scaffold_122:66999..80777-

>TCONS_00047130 ID=TCONS_00047130|Name=TCONS_00047130|organism=Clytia hemisphaerica|type=CDS|length=8910bp|location=Sequence derived from alignment at scaffold_122:66999..80777- (Clytia hemisphaerica)
AAATGGTCAAGGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATGC
GAAAACTCTTCGAATCAAGTTAGCACGAGGCATGTAACCACGGTTTTACG
GAAGTTGTTGAATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGC
AGGAGATGACATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATA
TTGACGTCGTCAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACA
AGGGCGACAGTGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACCA
AATACAAAAGATTTCGCTGGTTGGACACCTTTGAATCAGATGCCAATGAA
AAAACTTCGAAAACTCCGAAGAAGAAGAAAATTCAACTGGAAAAGAAGAA
TATGAAAGGCGAAACTCCTCTACACGTTGCTTGCATTAAGGTTGTCTCGT
CATCAGATACTACACCGAAAACATTCACCAAGGTTCAAGACGTTTCAACC
AAAGAGATTTCTGTAGACAAAGAAGAGGACGCAACTAAAACTACACGTAC
ACCATCTTCTGTCACCAGTGAACCTCTGAAGACAAAGCGATCTTCATCGT
CTCGACGCAGAACAATAGCTATAAAAGATTCCAAACGTCGAAAATCATCT
CAAGAAACGAAAACATCTACAACAAGAAGTAAAAGTGAAAGCAATGACAC
AGTAGTAGAAAAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCA
TGCCCGAAATGCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCA
TTGGGTCTCCGAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGG
ACGGTAAGCCGATCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTT
GTGATCACTTCTTTTGCAGATGGAAGTAAATTTCTCAAGAACAAAAAGTG
CACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTGAAATGGTCAA
GGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATGCGAAAACTCTT
CGAATCAAGTTAGCACGAGGCATGTAACCACGGTTTTACGGAAGTTGTTG
AATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGCAGGAGATGAC
ATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATATTGACGTCGT
CAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACAAGGGCGACAG
TGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACCAAATACAAAAG
ATTTCGCTGGTTGGACACCTTTGAATCAGATGCCAATGAAAAAACTTCGA
AAACTCCGAAGAAGAAGAAAATTCAACTGGAAAAGAAGAATATGAAAGGC
GAAACTCCTCTACACGTTGCTTGCATTAAGGTTGTCTCGTCATCAGATAC
TACACCGAAAACATTCACCAAGGTTCAAGACGTTTCAACCAAAGAGATTT
CTGTAGACAAAGAAGAGGACGCAACTAAAACTACACGTACACCATCTTCT
GTCACCAGTGAACCTCTGAAGACAAAGCGATCTTCATCGTCTCGACGCAG
AACAATAGCTATAAAAGATTCCAAACGTCGAAAATCATCTCAAGAAACGA
AAACATCTACAACAAGAAGTAAAAGTGAAAGCAATGACACAGTAGTAGAA
AAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAAT
GCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTCC
GAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGCC
GATCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATCACTT
CTTTTGCAGATGGAAGTAAATTTCTCAAGAACAAAAAGTGCACTAGAAAA
GCTTCTCGAAAAGTTCAAATGTAACCAGTGAAATGGTCAAGGACTTTTAC
CGAAAGATTGTTGTACTACCGATGAAATGCGAAAACTCTTCGAATCAAGT
TAGCACGAGGCATGTAACCACGGTTTTACGGAAGTTGTTGAATTGCTTTT
GCAACATGGCGCATATGTTGATGACGTTGCAGGAGATGACATGGAGACAC
CCCTTCATGATGCTGTCTCTAATAATCATATTGACGTCGTCAAATGCTTG
CTCAAAACAACTAATGCACCAATAGGAACAAGGGCGACAGTGACCGAGTA
AAGGAACTTCTTGAGCTTGGTGCGAAACCAAATACAAAAGATTTCGCTGG
TTGGACACCTTTGAATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAA
GAAGAAGAAAATTCAACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTC
TACACGTTGCTTGCATTAAGGTTGTCTCGTCATCAGATACTACACCGAAA
ACATTCACCAAGGTTCAAGACGTTTCAACCAAAGAGATTTCTGTAGACAA
AGAAGAGGACGCAACTAAAACTACACGTACACCATCTTCTGTCACCAGTG
AACCTCTGAAGACAAAGCGATCTTCATCGTCTCGACGCAGAACAATAGCT
ATAAAAGATTCCAAACGTCGAAAATCATCTCAAGAAACGAAAACATCTAC
AACAAGAAGTAAAAGTGAAAGCAATGACACAGTAGTAGAAAAGACGGTGT
GCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAATGCAACACGGT
TCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTCCGAATTCCTTT
CCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGCCGATCAGAAGA
TTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATCACTTCTTTTGCAGA
TGGAAGTAAATTTCTCAAGAACAAAAAGTGCACTAGAAAAGCTTCTCGAA
AAGTTCAAATGTAACCAGTGAAATGGTCAAGGACTTTTACCGAAAGATTG
TTGTACTACCGATGAAATGCGAAAACTCTTCGAATCAAGTTAGCACGAGG
CATGTAACCACGGTTTTACGGAAGTTGTTGAATTGCTTTTGCAACATGGC
GCATATGTTGATGACGTTGCAGGAGATGACATGGAGACACCCCTTCATGA
TGCTGTCTCTAATAATCATATTGACGTCGTCAAATGCTTGCTCAAAACAA
CTAATGCACCAATAGGAACAAGGGCGACAGTGACCGAGTAAAGGAACTTC
TTGAGCTTGGTGCGAAACCAAATACAAAAGATTTCGCTGGTTGGACACCT
TTGAATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAAGAAGAAGAAA
ATTCAACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTCTACACGTTGC
TTGCATTAAGGTTGTCTCGTCATCAGATACTACACCGAAAACATTCACCA
AGGTTCAAGACGTTTCAACCAAAGAGATTTCTGTAGACAAAGAAGAGGAC
GCAACTAAAACTACACGTACACCATCTTCTGTCACCAGTGAACCTCTGAA
GACAAAGCGATCTTCATCGTCTCGACGCAGAACAATAGCTATAAAAGATT
CCAAACGTCGAAAATCATCTCAAGAAACGAAAACATCTACAACAAGAAGT
AAAAGTGAAAGCAATGACACAGTAGTAGAAAAGACGGTGTGCTAATTCAC
TGGTGGATGACGGGAAACCATGCCCGAAATGCAACACGGTTCTTTGGAAG
GAGCACATGCAAGAAGTTCATTGGGTCTCCGAATTCCTTTCCGTTACAAA
TCGTATCAAAAATGTCATGGACGGTAAGCCGATCAGAAGATTCTTTCAGA
GACCTGTTCTTTCGAACTTTGTGATCACTTCTTTTGCAGATGGAAGTAAA
TTTCTCAAGAACAAAAAGTGCACTAGAAAAGCTTCTCGAAAAGTTCAAAT
GTAACCAGTGAAATGGTCAAGGACTTTTACCGAAAGATTGTTGTACTACC
GATGAAATGCGAAAACTCTTCGAATCAAGTTAGCACGAGGCATGTAACCA
CGGTTTTACGGAAGTTGTTGAATTGCTTTTGCAACATGGCGCATATGTTG
ATGACGTTGCAGGAGATGACATGGAGACACCCCTTCATGATGCTGTCTCT
AATAATCATATTGACGTCGTCAAATGCTTGCTCAAAACAACTAATGCACC
AATAGGAACAAGGGCGACAGTGACCGAGTAAAGGAACTTCTTGAGCTTGG
TGCGAAACCAAATACAAAAGATTTCGCTGGTTGGACACCTTTGAATCAGA
TGCCAATGAAAAAACTTCGAAAACTCCGAAGAAGAAGAAAATTCAACTGG
AAAAGAAGAATATGAAAGGCGAAACTCCTCTACACGTTGCTTGCATTAAG
GTTGTCTCGTCATCAGATACTACACCGAAAACATTCACCAAGGTTCAAGA
CGTTTCAACCAAAGAGATTTCTGTAGACAAAGAAGAGGACGCAACTAAAA
CTACACGTACACCATCTTCTGTCACCAGTGAACCTCTGAAGACAAAGCGA
TCTTCATCGTCTCGACGCAGAACAATAGCTATAAAAGATTCCAAACGTCG
AAAATCATCTCAAGAAACGAAAACATCTACAACAAGAAGTAAAAGTGAAA
GCAATGACACAGTAGTAGAAAAGACGGTGTGCTAATTCACTGGTGGATGA
CGGGAAACCATGCCCGAAATGCAACACGGTTCTTTGGAAGGAGCACATGC
AAGAAGTTCATTGGGTCTCCGAATTCCTTTCCGTTACAAATCGTATCAAA
AATGTCATGGACGGTAAGCCGATCAGAAGATTCTTTCAGAGACCTGTTCT
TTCGAACTTTGTGATCACTTCTTTTGCAGATGGAAGTAAATTTCTCAAGA
ACAAAAAGTGCACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTG
AAATGGTCAAGGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATGC
GAAAACTCTTCGAATCAAGTTAGCACGAGGCATGTAACCACGGTTTTACG
GAAGTTGTTGAATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGC
AGGAGATGACATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATA
TTGACGTCGTCAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACA
AGGGCGACAGTGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACCA
AATACAAAAGATTTCGCTGGTTGGACACCTTTGAATCAGATGCCAATGAA
AAAACTTCGAAAACTCCGAAGAAGAAGAAAATTCAACTGGAAAAGAAGAA
TATGAAAGGCGAAACTCCTCTACACGTTGCTTGCATTAAGGTTGTCTCGT
CATCAGATACTACACCGAAAACATTCACCAAGGTTCAAGACGTTTCAACC
AAAGAGATTTCTGTAGACAAAGAAGAGGACGCAACTAAAACTACACGTAC
ACCATCTTCTGTCACCAGTGAACCTCTGAAGACAAAGCGATCTTCATCGT
CTCGACGCAGAACAATAGCTATAAAAGATTCCAAACGTCGAAAATCATCT
CAAGAAACGAAAACATCTACAACAAGAAGTAAAAGTGAAAGCAATGACAC
AGTAGTAGAAAAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCA
TGCCCGAAATGCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCA
TTGGGTCTCCGAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGG
ACGGTAAGCCGATCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTT
GTGATCACTTCTTTTGCAGATGGAAGTAAATTTCTCAAGAACAAAAAGTG
CACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTGAAATGGTCAA
GGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATGCGAAAACTCTT
CGAATCAAGTTAGCACGAGGCATGTAACCACGGTTTTACGGAAGTTGTTG
AATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGCAGGAGATGAC
ATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATATTGACGTCGT
CAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACAAGGGCGACAG
TGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACCAAATACAAAAG
ATTTCGCTGGTTGGACACCTTTGAATCAGATGCCAATGAAAAAACTTCGA
AAACTCCGAAGAAGAAGAAAATTCAACTGGAAAAGAAGAATATGAAAGGC
GAAACTCCTCTACACGTTGCTTGCATTAAGGTTGTCTCGTCATCAGATAC
TACACCGAAAACATTCACCAAGGTTCAAGACGTTTCAACCAAAGAGATTT
CTGTAGACAAAGAAGAGGACGCAACTAAAACTACACGTACACCATCTTCT
GTCACCAGTGAACCTCTGAAGACAAAGCGATCTTCATCGTCTCGACGCAG
AACAATAGCTATAAAAGATTCCAAACGTCGAAAATCATCTCAAGAAACGA
AAACATCTACAACAAGAAGTAAAAGTGAAAGCAATGACACAGTAGTAGAA
AAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAAT
GCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTCC
GAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGCC
GATCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATCACTT
CTTTTGCAGATGGAAGTAAATTTCTCAAGAACAAAAAGTGCACTAGAAAA
GCTTCTCGAAAAGTTCAAATGTAACCAGTGAAATGGTCAAGGACTTTTAC
CGAAAGATTGTTGTACTACCGATGAAATGCGAAAACTCTTCGAATCAAGT
TAGCACGAGGCATGTAACCACGGTTTTACGGAAGTTGTTGAATTGCTTTT
GCAACATGGCGCATATGTTGATGACGTTGCAGGAGATGACATGGAGACAC
CCCTTCATGATGCTGTCTCTAATAATCATATTGACGTCGTCAAATGCTTG
CTCAAAACAACTAATGCACCAATAGGAACAAGGGCGACAGTGACCGAGTA
AAGGAACTTCTTGAGCTTGGTGCGAAACCAAATACAAAAGATTTCGCTGG
TTGGACACCTTTGAATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAA
GAAGAAGAAAATTCAACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTC
TACACGTTGCTTGCATTAAGGTTGTCTCGTCATCAGATACTACACCGAAA
ACATTCACCAAGGTTCAAGACGTTTCAACCAAAGAGATTTCTGTAGACAA
AGAAGAGGACGCAACTAAAACTACACGTACACCATCTTCTGTCACCAGTG
AACCTCTGAAGACAAAGCGATCTTCATCGTCTCGACGCAGAACAATAGCT
ATAAAAGATTCCAAACGTCGAAAATCATCTCAAGAAACGAAAACATCTAC
AACAAGAAGTAAAAGTGAAAGCAATGACACAGTAGTAGAAAAGACGGTGT
GCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAAATGCAACACGGT
TCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCTCCGAATTCCTTT
CCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAGCCGATCAGAAGA
TTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGATCACTTCTTTTGCAGA
TGGAAGTAAATTTCTCAAGAACAAAAAGTGCACTAGAAAAGCTTCTCGAA
AAGTTCAAATGTAACCAGTGAAATGGTCAAGGACTTTTACCGAAAGATTG
TTGTACTACCGATGAAATGCGAAAACTCTTCGAATCAAGTTAGCACGAGG
CATGTAACCACGGTTTTACGGAAGTTGTTGAATTGCTTTTGCAACATGGC
GCATATGTTGATGACGTTGCAGGAGATGACATGGAGACACCCCTTCATGA
TGCTGTCTCTAATAATCATATTGACGTCGTCAAATGCTTGCTCAAAACAA
CTAATGCACCAATAGGAACAAGGGCGACAGTGACCGAGTAAAGGAACTTC
TTGAGCTTGGTGCGAAACCAAATACAAAAGATTTCGCTGGTTGGACACCT
TTGAATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAAGAAGAAGAAA
ATTCAACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTCTACACGTTGC
TTGCATTAAGGTTGTCTCGTCATCAGATACTACACCGAAAACATTCACCA
AGGTTCAAGACGTTTCAACCAAAGAGATTTCTGTAGACAAAGAAGAGGAC
GCAACTAAAACTACACGTACACCATCTTCTGTCACCAGTGAACCTCTGAA
GACAAAGCGATCTTCATCGTCTCGACGCAGAACAATAGCTATAAAAGATT
CCAAACGTCGAAAATCATCTCAAGAAACGAAAACATCTACAACAAGAAGT
AAAAGTGAAAGCAATGACACAGTAGTAGAAAAGACGGTGTGCTAATTCAC
TGGTGGATGACGGGAAACCATGCCCGAAATGCAACACGGTTCTTTGGAAG
GAGCACATGCAAGAAGTTCATTGGGTCTCCGAATTCCTTTCCGTTACAAA
TCGTATCAAAAATGTCATGGACGGTAAGCCGATCAGAAGATTCTTTCAGA
GACCTGTTCTTTCGAACTTTGTGATCACTTCTTTTGCAGATGGAAGTAAA
TTTCTCAAGAACAAAAAGTGCACTAGAAAAGCTTCTCGAAAAGTTCAAAT
GTAACCAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030050XLOC_030050Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047130-exon-scaffold_122-1575043694:80537..80777TCONS_00047130-exon-scaffold_122-1575043694:80537..80777Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:71815..71871TCONS_00047130-exon-scaffold_122-1575043694:71815..71871Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:71075..71223TCONS_00047130-exon-scaffold_122-1575043694:71075..71223Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:68833..68861TCONS_00047130-exon-scaffold_122-1575043694:68833..68861Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:68435..68678TCONS_00047130-exon-scaffold_122-1575043694:68435..68678Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:68072..68178TCONS_00047130-exon-scaffold_122-1575043694:68072..68178Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:67845..67925TCONS_00047130-exon-scaffold_122-1575043694:67845..67925Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:67431..67609TCONS_00047130-exon-scaffold_122-1575043694:67431..67609Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1575043694:66999..67227TCONS_00047130-exon-scaffold_122-1575043694:66999..67227Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:80537..80777TCONS_00047130-exon-scaffold_122-1510915933:80537..80777Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:71815..71871TCONS_00047130-exon-scaffold_122-1510915933:71815..71871Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:71075..71223TCONS_00047130-exon-scaffold_122-1510915933:71075..71223Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:68833..68861TCONS_00047130-exon-scaffold_122-1510915933:68833..68861Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:68435..68678TCONS_00047130-exon-scaffold_122-1510915933:68435..68678Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:68072..68178TCONS_00047130-exon-scaffold_122-1510915933:68072..68178Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:67845..67925TCONS_00047130-exon-scaffold_122-1510915933:67845..67925Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:67431..67609TCONS_00047130-exon-scaffold_122-1510915933:67431..67609Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1510915933:66999..67227TCONS_00047130-exon-scaffold_122-1510915933:66999..67227Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:80537..80777TCONS_00047130-exon-scaffold_122-1491911889:80537..80777Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:71815..71871TCONS_00047130-exon-scaffold_122-1491911889:71815..71871Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:71075..71223TCONS_00047130-exon-scaffold_122-1491911889:71075..71223Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:68833..68861TCONS_00047130-exon-scaffold_122-1491911889:68833..68861Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:68435..68678TCONS_00047130-exon-scaffold_122-1491911889:68435..68678Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:68072..68178TCONS_00047130-exon-scaffold_122-1491911889:68072..68178Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:67845..67925TCONS_00047130-exon-scaffold_122-1491911889:67845..67925Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:67431..67609TCONS_00047130-exon-scaffold_122-1491911889:67431..67609Clytia hemisphaericaexon
TCONS_00047130-exon-scaffold_122-1491911889:66999..67227TCONS_00047130-exon-scaffold_122-1491911889:66999..67227Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047130-proteinTCONS_00047130-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_122supercontigscaffold_122:66999..80777 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.234979	0.479248	0.0724708	1.1147	2.45107	0.660987	2.61566	0.563735	1.912	0.737992	0.52654	1.00343	1.06892	0.6649	0.133289	0	0.355932	0.342121	0	0	0.341809	0	0.421793	2.36039	2.51608	1.23374	0.716796	0	0.223358	0.447154
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00047130 vs. Swiss-Prot (Human)
Match: ANR12 (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.054e-29
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 3 
Query:  771 QLEKKNMKGETPLHVACIKGDSDRVKELLELGAKPNTKDFAGWTPLHEACNHGFTEVVELLLQHGAYVDDVAGDDMETPLHDAVSNNHIDVVKCLLKTTNAPIGTRNGQGLLPKDCC 1121
            ++ K+N +GETPLH+A I+GD  +VKEL+ LGA  N KDFAGWTPLHEACN G+ +V ++L+  GA V+    DD +TPLHD+ S+ H D+VK LL+    P    N  G  P D  
Sbjct:  177 KVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDD-DTPLHDSASSGHRDIVKLLLRHGGNPFQA-NKHGERPVDVA 291
The following BLAST results are available for this feature:
BLAST of TCONS_00047130 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR121.054e-2950.43Ankyrin repeat domain-containing protein 12 OS=Hom... [more]
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